Gambusia affinis (western mosquitofish): 122823900
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Entry
122823900 CDS
T07758
Symbol
pola1
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122823900 (pola1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gaf03032
]
122823900 (pola1)
Enzymes [BR:
gaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
122823900 (pola1)
DNA replication proteins [BR:
gaf03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
122823900 (pola1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
122823900
NCBI-ProteinID:
XP_043959845
LinkDB
All DBs
Position
LG21:13194518..13249501
Genome browser
AA seq
1477 aa
AA seq
DB search
MAPVADPDKDMDVPDGDEKGDACGLAKSRSRREKREKVGRKSALEQLKKAKKGEKIKYEV
EEITSVYEEVDEQQYSKMVRERQEDDWIIDDDGTGYVEDGREIFDDDLDDDVVESKGKGG
AKGGESKKTLKKSSVAKPNTIKSLFMNSNVKRPAEKDVDLSKDDLLGDILQDLHNEKPSA
LTPPPLVTLKKKKPVGSSMNPFSIKPHVPKQEKPSSAGLKAKVIRPPPPDPSPQPSARPP
PATTEVLPEKHEAELEEPNEEREDDSLAFEGVDFDEPMEVEHEEKKAVAKDEAKLEPEGG
LTAMEVKVEHKAERQDPVLLPNRVGSSWGQEAAGGVSEAPVEVQVDSSKLPLVEGPDGEQ
VFRFYWLDAFEDPYNQPGVVYLFGKVWIESAQSHVSCCVTVKNIDRTMYLLPREFKTNPK
TGEVSDQPVGMMDVYQEFNELSEKFKIMKFKSKKVEKSYAFEIPDVPSQCDYLEVRYSAE
FPALPSDLKGTTFSHVFGTNTSSLEHFLLSRKIKGPCWLDIKTPQLMNQPVSWCKVEALA
VRSDLVSVIKDLPLPPLTIMSISLKTVQNPKTHHNEIVSLVALIHYSFHMDKAPPQPPYQ
THFCVISKPSDCIFPYDFKDAVKKKKVKVEMATSERTLLGCFLAKMHKIDPDVLVGHDIF
GFDLEVLLQRINVCKVPHWSKIGRLRRANMPRLGGRGAFAEKSATCGRLVCDVEISAKEL
IRCKSYHLTELAGQVLKVERATVPQESIRNLYSDSPHLLYLLELTWTDAKLILQLMCELN
VLPLALQITSIAGNVLSRTLMGGRSERNEFLLLHAFHDKNFIVPDKPSFKKAHLDTVEGE
DDVDAGKGKRKKKAAYAGGLVLDPKVGFYDKFVLLLDFNSLYPSIIQEFNICFTTVQRQA
QNSHKKTDDDEPEEIPEIPDSNLEMGILPKEIRKLVERRRHVKQLMKQQDINPDLYMQYD
IRQKALKLTANSMYGCLGFSYSRFYAKPLAALVTHKGREILMHTKDMVQRMNLEVIYGDT
DSIMINTNSKSLEEVFKLGHKIKAEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEQH
GEGRYSVKQELKGLDIVRRDWCDLAKECGNYVIGQILSDQSRDVIVENIQKHLVEVGEKV
ANGNIPLNQYEIHKALTKDPQDYPDKKSLPHVHVALWINSQGGRGVKAGDTISYLICKDG
STLAASQRAYALEQLQKQEGLSVDTQYYLAQQVHPVVSRICDPIDGIDAVLIASWLGLDP
GQFRSQQQHQREEEADGTLGAAAQLNDEERYKDCERFTFTCPQCGTDNIYDSVFEGAGDR
AEPSLMRCCHLPCTNSPIDNVVHISNKLQLDIRRHIKKYYSGWLVCEDQACQNRTRRLPI
AFSRHGPICPACTRATLRAEYSEKALYNQLCFYSYIFDWDYAMAKLPNSVHKMSLKKASS
TQQAYLKLKKVPDRALATSGYSEVNLAKLFQAFSSFK
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atggctccggttgcagacccagataaagacatggatgttccggacggtgatgagaagggc
gatgcctgcggtctggccaagtctcgctccagacgagagaagcgggagaaggtgggcagg
aagtctgcgctggagcagctcaagaaggccaaaaagggggaaaagatcaaatacgaggtg
gaggagatcaccagtgtgtatgaagaggtggacgagcagcagtactcgaaaatggtgcga
gagaggcaggaggacgactggattattgacgatgacggcacaggatatgttgaagacggg
cgagagatcttcgacgatgatttagacgacgatgttgtagaaagcaaaggaaaagggggc
gcaaaagggggcgagtcaaagaaaaccctgaagaaatcttctgtagcgaagcctaacact
attaagagtctcttcatgaacagcaatgttaagaggcctgcagagaaagatgtagatctg
tccaaagatgacttgttaggagatattttacaagatctacacaatgagaaaccttcagct
ctcactcctccacctttggttaccctgaagaaaaagaagccagtgggatcaagcatgaac
cccttttccatcaaacctcatgtgccaaagcaggagaagccctcatctgcgggattaaaa
gccaaggtgatccgacctccgcctccagacccctctccccaaccttcagcccgtcctcca
cctgcaacaactgaggttcttccagaaaaacatgaagcagagctggaggagccaaacgaa
gagagagaggacgacagtctggcttttgagggggtcgattttgatgagccaatggaggtt
gagcatgaggagaagaaggctgtagctaaagacgaagccaaacttgaacctgaaggcggg
ttgacagcgatggaagttaaagtggagcacaaagctgaacgtcaggatccagttctgctg
cccaacagagttggaagctcttggggacaggaggcggcaggtggagtcagtgaagctcca
gtggaggtgcaggtcgactccagcaagctccctctagtggaaggcccagatggggaacag
gtcttccgattctattggttggatgcttttgaagacccctacaaccaaccaggcgtggtg
tatctgttcgggaaagtgtggatcgagtcggcgcagtctcacgtcagctgctgcgttact
gtgaagaacattgacagaacaatgtaccttcttcctcgggaattcaaaacaaatccgaag
accggagaagtgtcagaccaaccagtggggatgatggacgtttaccaggagttcaacgag
ctttcggagaagttcaagattatgaagttcaaatctaagaaagtggagaagagctatgct
tttgaaattcctgacgtgcccagtcagtgcgactacttggaagtgagatattctgcagag
tttcctgctttgccatctgaccttaaagggacgacattttcccatgtttttggaacaaac
acctccagcttggagcacttccttctcagtaggaagattaaaggcccctgctggttggac
atcaagacaccacagctgatgaaccaaccggtcagctggtgtaaggtggaggctctcgct
gtgaggagtgacttggtttctgtgattaaagacctgccgcttccacccttaaccataatg
tccataagcctcaagacggttcagaaccccaagacgcatcacaatgagatcgtgtctctt
gttgcgctcatccactacagcttccatatggataaagctcctcctcagcctccctatcaa
actcatttctgtgtgatcagtaaaccatctgactgcatctttccttacgacttcaaagat
gctgtcaagaagaagaaagtgaaggtggagatggcaacgtcagagcggaccttgctcggc
tgcttcctggccaagatgcacaaaattgaccctgatgtgttggtgggtcatgatattttc
ggctttgatctggaagttctcctgcagaggatcaatgtgtgcaaggtcccccactggtct
aagattggacgcctcaggagggcaaatatgcccagattggggggccgtggagcgtttgct
gagaagagtgcaacgtgtggccgtctggtgtgtgacgtggagatctcggccaaagagctg
attcgttgtaaaagttatcatctgacggagctcgcaggtcaggtgctgaaggtggagcgg
gccacagttcctcaggaaagcatcagaaatctctacagcgactctcctcacctgctgtac
ctgctggagttgacatggactgatgcaaagctgatcctccagctcatgtgtgagcttaat
gtgctgccccttgccctgcagatcaccagcatcgccggcaatgtcctgtctcgcacacta
atgggtggtcgctctgagaggaacgagttcctgctgcttcatgccttccacgacaaaaac
tttattgtccctgacaaaccgtcctttaaaaaggcccatctggacactgttgagggagag
gacgatgtagatgcaggaaagggtaagaggaagaagaaggcagcctacgcaggaggtctg
gtgctggatccgaaagtcggtttctatgataagtttgtgctgctgctcgacttcaacagc
ttgtacccttcaatcatccaagagttcaacatttgcttcaccactgtacaaaggcaggct
cagaactcccacaaaaagactgatgatgatgagccagaggagattcctgagattccagat
tccaacctggaaatgggaatcctgcccaaggaaatcagaaaactggttgaacggcgtaga
catgttaagcagctcatgaaacaacaagacatcaatccagatctctacatgcagtacgac
atccgtcagaaggccttgaagctgactgccaacagcatgtatggctgtcttggattcagc
tacagccgcttctatgctaaaccacttgctgctctggtcacacacaagggaagagagatt
ctgatgcacactaaagacatggttcagaggatgaacctggaagtcatttatggagacaca
gactcaatcatgatcaacacgaacagcaaatcactggaggaagtcttcaaacttggacat
aagataaaggcagaggtcaacaagctctacaaactcctggagatagacatcgatggtgtt
ttcaagtctcttttgctgctgaagaagaagaaatatgccgccctggtggtggaacaacac
ggcgagggacgatacagtgtgaagcaggagctcaaaggcttggacattgtccgcagagat
tggtgtgacctggccaaagagtgtgggaactacgtgattggtcagatcttgtcggaccag
agtcgggatgtcattgtggagaacatccagaagcatctggtggaggttggagagaaggtg
gcgaacggaaacataccactcaaccagtatgagatccacaaggcactgaccaaggaccct
caggactacccagataagaagagtctccctcatgtgcatgttgctctgtggataaactca
cagggaggtcggggtgtcaaagccggagatacaatctcatacctcatttgcaaggatggc
tccacgctggcggccagtcagagggcctacgctctggagcagcttcagaagcaggagggc
ctcagcgtggacacacagtattacctggcccagcaggtccaccctgtagtttctcgcatc
tgcgaccccattgacgggattgatgcagtgctcatagcctcatggttgggtctggaccca
ggtcagttcagatcccagcagcagcatcagagggaggaggaggccgacggcacgctggga
gcggcggcgcagctgaacgacgaggagcgatacaaagactgcgagaggttcaccttcacc
tgcccccagtgtggcaccgacaacatctacgacagcgtcttcgaaggagcgggtgatagg
gctgagcccagtttgatgcgctgctgtcacctcccttgtacgaacagtcccatcgacaac
gttgtccacatcagcaacaagctgcaactcgatatccggcgccacatcaaaaaatactac
tctggctggttggtgtgtgaggaccaggcctgccagaacagaaccaggcgcctgccgatc
gccttctcccgacacggacccatctgccctgcctgcacccgtgctacgctcagagctgag
tactcggagaaggccctctacaaccagctctgcttctacagctacatcttcgactgggac
tacgccatggccaaactcccaaactctgtccacaaaatgtctttaaagaaagcgagctcc
acacagcaggcgtatctgaagctgaagaaagtcccagacagggctttggccaccagcggc
tactctgaggttaacttggccaaactcttccaagctttctcctcattcaaatga
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integrated database retrieval system
