Gambusia affinis (western mosquitofish): 122823911
Help
Entry
122823911 CDS
T07758
Symbol
shrprbck1r
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04217
Necroptosis
gaf04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
122823911 (shrprbck1r)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122823911 (shrprbck1r)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122823911 (shrprbck1r)
Enzymes [BR:
gaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
122823911 (shrprbck1r)
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
122823911 (shrprbck1r)
Multi subunit type E3
LUBAC complex
122823911 (shrprbck1r)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
zf-RING_2
zf-RING_5
IBR_1
ubiquitin
Motif
Other DBs
NCBI-GeneID:
122823911
NCBI-ProteinID:
XP_043959867
LinkDB
All DBs
Position
LG21:13436915..13448289
Genome browser
AA seq
699 aa
AA seq
DB search
MSLSSGGWTHSPGLTPDQSTALTSSYEASQAQPGCHTVLMSVRVSVCHSGVRPLCLPGAG
DESLRLQLSMDPGKSGEFRLAIQSTSGTGQSVTINEFDLRSINYEVKSPKCHELISVAPP
CDRISFNFSSEQEAEGWATVVMSSLREAHRATPQENGLQHLFDGLHLRNTSALQQTEDAC
IELKKAIEAGDLQSASVFAASLARRQAALKIQPSTKTYEETEINLAVIVEDSSSSCCITV
KVFPHMTTASLKQQMFLEYGFHPRVQRWVIGQCLCADLRTLASYGVHQDGDTAFLYLLSA
RHSRLTLQVLQKDQESALLLSPPLSFQNPSLPAAFTNGPLSHDGRPFSTLPPRLRRTSNN
GGSERPNIGDFEMPRLNPNTHSTLGWSCPSCTYINKPTRPGCEICSTNRPENYIIPGGHQ
PDALELRRIQQEKESIRQYQLVKEQERRENFDRLVKIDGQDLVPNPEPVDCKICFVDLQS
GEGVLLRECLHCFCKECLRSIIMLCEEPEVSCPYRDDTYACPWALQEREIRALVPPEEYE
RWLQRSLSVAESRCEGSYHCATPDCLGWCVYEDTVNVFHCPVCRKHNCLICKAIHEGMNC
KQYQDDLAARAINDSAARRTTHLLKTLVQSGEAMHCPQCGIIVQKRDGCDWLRCTVCHTE
ICWVTRGPRWGPKGPGDTSGGCRCNVNNQKCHPKCQNCH
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctaagttcaggcggctggactcatagccccggcctcacgccggaccagtccacc
gctctcaccagcagctatgaagcctcgcaggcacagcctggctgccataccgtcctcatg
tcggttcgggtctcggtgtgccattccggggttcgtccgctgtgtcttccgggagctggt
gatgagtcactccgcctgcaactaagcatggacccggggaaatccggggaattccggctg
gcgatacagagcaccagcgggacgggccagagtgtgaccataaacgagtttgatttaaga
tccataaattatgaagtgaagtcgccaaagtgccacgagctgatatcggtggcgcctccg
tgcgaccgcatcagcttcaacttcagcagcgagcaagaggctgagggatgggccaccgtg
gtcatgtcctcgctgagagaagcgcatcgagccacacctcaggaaaacggtctacagcac
ctcttcgatggcctccatctccggaatacctcggctttacagcaaacagaggatgcctgc
atagagctgaaaaaagccatcgaggcaggggacctgcagagcgcttctgtcttcgccgcc
tctctcgcccgcagacaggcagccctgaagatccagccctccaccaaaacctatgaagaa
actgaaataaatttagctgttattgtcgaggattcctcctcgtcttgttgcatcactgtg
aaagttttccctcacatgactactgcgtcgttgaagcagcagatgtttctcgaatatggc
ttccacccgcgggtccagcgttgggtgattggccagtgtttgtgtgccgacctccgaact
ctcgcgtcgtacggcgtccatcaggatggtgacacggccttcttgtacctcttgtcagcc
cgccactctcgcctgaccctccaggtcctgcaaaaggaccaggagagcgccctccttctc
agccctccgttgtcttttcaaaacccctcgctccctgctgccttcacaaacggccccctc
tcccatgatgggcggccattttccactctacctccaagactccgcaggaccagcaataat
ggtggctcagagagaccgaatatcggcgatttcgaaatgcctcgactcaatcccaacaca
cattctaccctgggttggtcttgtccatcttgcacatacatcaacaagccaacgcggccg
ggctgcgagatctgcagtacaaaccggcctgagaactacattatccctggaggacaccag
cctgacgctctggagctcagaaggatccagcaggagaaggagtcaatcagacagtatcag
ctggtaaaggagcaggagcgaagagagaactttgaccgtctggtgaagatagacggtcag
gacctggtgcccaatcctgagcctgtggactgtaagatctgcttcgtggacctgcagtcg
ggtgaaggtgtcctgctgagagagtgcctccactgtttctgcaaagagtgcttgcgctcc
atcatcatgctgtgtgaggagcctgaggtttcctgtccatacagagacgatacgtacgcc
tgtccttgggccctgcaggagcgagagatccgagctttggtgcctccagaggaatatgag
cgctggctacagagaagcctttctgtagcagagtctcgctgcgagggcagctatcactgt
gcaactccggattgcctgggatggtgtgtgtacgaggacaccgtcaatgtcttccactgt
cccgtctgtcggaaacacaactgtctcatttgtaaggccatccatgagggaatgaattgt
aaacaataccaagacgacctcgcagcccgagccataaacgactctgctgccagaagaacg
acacatctgctaaagacccttgtgcagtcaggggaggccatgcactgtcctcagtgtggc
atcattgtgcaaaagagagatggatgtgattggctgcgctgcactgtctgtcacactgag
atctgctgggtaaccagagggcctcgttggggacccaagggtcctggagacaccagtgga
ggatgccgctgcaatgtcaacaatcagaaatgtcaccctaaatgccagaactgtcactaa
DBGET
integrated database retrieval system
