Gambusia affinis (western mosquitofish): 122823944
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Entry
122823944 CDS
T07758
Symbol
ptchd1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gaf04990
]
122823944 (ptchd1)
Domain-containing proteins not elsewhere classified [BR:
gaf04990
]
Other domain-containing proteins
Patched domain-containing proteins
122823944 (ptchd1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
122823944
NCBI-ProteinID:
XP_043959959
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All DBs
Position
LG21:complement(4573881..4593659)
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AA seq
975 aa
AA seq
DB search
MLGGAPGLSGRWERLEPRPRAGRMLRQVLHAGLRTSFHAVGRFVAGHAVFFASAPVLLAI
LLGASFSRYRVEGDVESLLAPKHSLAKIEGNLVESLFPVNRSKHALYSDLQTPGRYGRVI
VTARRGSVLDPVHLETILQLHRRIYQMQVTVPATTVGSSGFNYSFSYLCLPDDKNVCIVD
DIIRAMEEIQSARTSNRSVPVLHYPITQLADGRQAYIGHQLGGVQGWGHGGAVRPQGTGA
KGEGARSAKAVQLTYYLQSRSGLMDRVAGRWENAFCAELKLFGASHPKLGLYPSTSSSLR
TDFQFSSVLARRPLLASLGVCGVLAILCCSMRDCVRSKPWLGMLALLSVALSGLTAAGIL
NLTGATYNSTYLGIPFVMLGHGLFGSFEMLSSWRRTREDQHVKERVASVFEDVMLRFSGS
TMIHLMTLGLAASPLTNMEAVRLFCRTAALAITISYIYMLSFYSSCLVFTGYLETRYRHG
CFCRRVPKPDRLDSKPAWYRCLMYTRYQDETQSTNPLHGVGQNHMSNPNVTHVANSSGVH
GHMANSIQTHSPHHTHSTTNADPHPQDCHLLLGCVRHCYGDWITNTYVKPFVVLLYLVYI
SFGLMGFLQVTQGSDPSALVATDTATVLYTRAQHRYFSSYSPVIGFYIYESAPYWNASVQ
RDLLEYAKGFQRISWLEAYLSYLSDRNQSTSQPRENFTRTLRHSFLHEPQFAHFADDIIF
AERGQGEEPDVAASRIFLVAKTTENKREEMSVLLDTLRRLSLTSRVRFLIFNPSFVYLDR
YATAVSSPLRHSLLAVLFLLGLSSLVVVEPLVSLWLGLTLLSVQFGVLGFMTLWGVEMDC
VSVLCLITALGHSADSSGPLLCGFASGRGESRTRWVRLVLERHGIPSLQTLVCYSAALVP
LCAVRSNLTHTLFRCLTLTAGCSALHTLAFLPTLLTFLPPSKSRNHRPGREGQRQEVECV
EMNDSTRVVDQITTV
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgctcggcggcgctccggggctttccggtcggtgggagaggctcgagccgcggccgcgc
gccggtaggatgctgcgccaggtgttgcacgcgggactgaggacgtcattccacgcggtg
ggccggttcgtggccggtcacgcggtgttcttcgcctcggcgcccgttctgctggccatc
ctgctgggggccagcttcagccgctaccgcgtggagggggacgtggagagcctgctggcg
cccaagcacagcctggccaagatcgagggcaacctggtggagagcctgttccccgtgaac
cgatccaagcacgcgctctattccgacctgcagacacctggacgctacgggcgagtgatc
gtcacagcccgaaggggcagcgtgctggacccggttcacctggagaccattctacagctc
cacaggcggatctaccagatgcaggtgacggtcccggctacgacggtgggctcaagcggc
ttcaactactccttctcctacctctgtctccccgacgacaagaacgtctgcatcgtggac
gacataatccgggccatggaggagatccagtcagcccggacttccaaccgaagcgtcccg
gttctgcactaccccatcacacagcttgcggacggaaggcaagcgtacatcgggcaccag
ctgggcggcgtgcagggctggggacacggcggggcggtgcgaccccaagggacgggagcc
aaaggggaaggcgcccgttctgcaaaagcggtgcagctcacctactacctccaatcccga
agcgggctgatggatcgggtggcgggtcggtgggagaacgccttctgtgccgagctgaag
ctctttggagcgtcgcatcccaaactggggctttatccctccacgtcttcctcgctgcgg
actgacttccagttctcctccgtgctggcacggcgccccctgctggcgagtttgggagtg
tgcggggtgctggccatcctctgttgctccatgagggactgtgtgaggtccaaaccgtgg
ctgggtatgctggctctgctgtccgtggctctgtcagggctcactgctgctggtatcctg
aacctgaccggagctacatacaactccacttacctgggaatccccttcgtcatgctaggc
cacggtctcttcggctcctttgagatgttgtcatcatggaggcgaacgcgggaggatcag
cacgtaaaagagcgcgtggcaagcgtctttgaggatgtcatgctgcgtttctccggctcc
accatgatccatctgatgacgttgggtctggctgcctcgccgctcaccaacatggaggcc
gtccgcctcttctgccgcaccgctgccctcgccatcaccatcagctacatctacatgtta
tccttttacagttcctgcctggtgtttacaggctacttggagacgaggtatagacatggc
tgcttctgtcggcgagtaccaaagccagaccggctggattcgaaaccagcttggtaccgg
tgtttgatgtacacccgttaccaagatgagactcaatcaaccaacccgcttcatggagtt
ggtcagaatcatatgtcaaatcctaacgtaactcacgtggcaaacagttctggtgttcat
ggacacatggctaactccatacaaacgcactcgccccatcacactcattcaacaacaaac
gcagatcctcaccctcaggactgccatcttttgctgggatgtgttcggcattgctatgga
gactggatcaccaacacttacgtcaaacccttcgtagttttactctatctggtttacatc
tcctttggattgatgggctttcttcaggtgacccagggttctgatcccagtgcactggtt
gccacggatacagcaacagtgttgtacacacgtgcgcagcatcggtacttcagctcttac
tcgccagtgattggattctatatctatgaaagcgccccctactggaacgcctcggtgcag
cgggacctgctggagtacgccaaaggcttccagaggatcagctggctggaggcgtacctg
agctacctgtccgaccgcaaccagtccaccagccagcctcgcgagaacttcacccgcaca
ctgcgccactccttccttcacgaaccgcagttcgcccacttcgcagacgacatcatcttc
gcagagcgcggacaaggggaggagccagacgtggcggcctcgcgtatcttcttggtcgcc
aagacaacggagaacaagcgggaggagatgtcggttctgctggacactctgcgccgtctg
tctctcacctctcgggttcgcttcctgatattcaacccctcctttgtgtacttggaccgg
tacgcgacggcggtcagctcccccctcagacactcactgctggcggtgctcttcctgttg
ggtctgtcctctctggttgttgtggagccgctggtctccctgtggcttggactcaccctt
ctctctgtccagtttggggttctgggcttcatgactttgtggggcgtggagatggactgc
gtctcggtactgtgcctgatcacggctttgggtcactcggcggactccagcggccccctc
ctctgtggcttcgcctcgggccgcggtgaaagcaggactcgctgggttcgcttggtgtta
gagcgacacggcattccctccctacagacgcttgtgtgctacagcgccgccctggtgccc
ctctgcgctgtgcgctccaacctcactcacacactctttcgctgcctcactctgacggcc
gggtgctcggccctgcacacactggccttcctgcccaccctcctcaccttcctccctccc
tccaagagcaggaaccatcggccaggaagagagggccagaggcaggaagtggagtgtgtt
gaaatgaatgacagcaccagagtagtggaccagatcaccactgtttga
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