Gambusia affinis (western mosquitofish): 122823945
Help
Entry
122823945 CDS
T07758
Name
(RefSeq) toll-like receptor 13 isoform X1
KO
K18808
toll-like receptor 13
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gaf04054
]
122823945
Pattern recognition receptors [BR:
gaf04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
122823945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
TIR_2
LRR_9
LRR_NXF1-5
LRR_EndoS
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
122823945
NCBI-ProteinID:
XP_043959961
LinkDB
All DBs
Position
LG21:4731364..4738915
Genome browser
AA seq
953 aa
AA seq
DB search
MGLEEIKTKPNSGSESSDHSVAFLLIYMICLGPLATGFSLKSCRVSQNAAICTDSQLKFV
PQDIPPTVTGFDLSKNQISRIQRSDFTNLMVLEDLNLCKNHISKIDSGAFVNLISLRKLT
LNNNKLVKLGELAFDGLGNLTELRLNTNKITALSPTAFQSLTRLILLDISQNKLETISNL
RLILQHMPQLQELVIRTNVLRTFQSWKLTNRSLDLQALDLSHNPIRDFRVTANIFPNLTC
LIIGDKFSVIPMKWDVKNKTFLRQLSSLDVSGLHTSPENMEALLKTVNSSLTSLALNNIK
RNRTQLINLSCSIPTVSKLQFRSNNLRTVSSYYFKPCVNVVELDLSENHIKIIDENAFTS
MRNLTTLRLSKNKLSSVPTAIRTLQNLSQLDLSNNMISTLTCQDFSNQTRLKELSLQNNS
IFKLTECAFKGLVHLQILRLQSSQITDLKGAFKTSLPKLKQLLLNGNKLTAIRKGEFEGL
KSLWSLSLHQNQIKILDKGCFVGLLNLTDIRLQSNGITTGTLKTSPFKGLSNLKRLYLND
NHIKGFNITPFSDLHQLEELSLHGQHYRGKSSLPSNFLHGLSRLLSFNARNSQLINVDKD
TFVNTPNLERLDLSSNDLENLTAELFAPIRNLKSLYISRIAVHSLDFLAEANLTKLEFLQ
GRHNQYSVVTKDIIKSLPSLQYLDFKYNSFYCECINAWFVNWTIFSKRTQVNDAYNYSCN
YPDDFKGKKLLDLKILKSCSQDVNFICFVSTTSTILFVMAASFIYHFMRWQLYYAYYLFL
GWLFDSKYKNKQVPHQYDAFISYNHHDEPWVIGELLPKLEGEQGWKLCLHHRDFEPGKPI
TQNITDAIYGSRKTICVISRRYLESEWCSREVQTASFRLFDEQKDVLILVFLEDIPTYLL
SPFHRMRKLLKKQTYLSWPRAADHPEVFWENLRKALQTGNDPNEENFLSLTQE
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgggactggaagaaatcaaaaccaaaccaaattcaggatctgagagttctgatcatagc
gttgcttttctcctgatttacatgatctgtttaggtcctctggccaccggattttccctg
aagagttgcagggtcagccagaatgcggccatatgtacagacagccaactcaaatttgtt
cctcaagacattccaccaactgtgacaggttttgatttgtctaaaaaccaaatctcaaga
atacaacgttcagatttcacaaatctaatggttctagaagatttaaatctttgtaaaaac
cacatttcaaagatagacagcggtgcttttgtcaacttgatctcccttcggaagttgact
ctgaacaacaacaagctcgttaagctaggagagttggcttttgatgggttgggcaacctc
actgagttaagacttaacactaacaagatcacagcattgtcacccactgcttttcagagc
ttgaccaggttaatacttttggatatttctcagaacaaactggaaacgatatcaaatctt
cgtctgattttgcagcacatgccacaactgcaggagttggtgataagaacgaatgtttta
agaacctttcagtcatggaaacttaccaaccgctcgctggatctccaggctttggatttg
tcccataatcccataagagacttcagggtcactgccaacatcttcccaaatctgacttgc
ctcatcatcggtgacaagttcagcgtcataccaatgaaatgggacgtgaaaaacaaaact
tttctcagacagctgtccagtcttgatgtcagcgggcttcatacgtctcctgaaaacatg
gaagcattactcaaaacggtgaactcctcactaacatctctagcgctgaacaatataaaa
cgcaatcggacgcaactgatcaacctctcttgctccatcccaactgtgtccaaattgcag
tttcgaagcaacaatcttagaacagtctcttcgtattactttaagccgtgtgtcaatgta
gtagaattagatttatcagagaatcacattaaaattatcgatgagaacgcattcacatct
atgagaaatttaacaactttgaggctgagtaagaacaaactttcatcagttcctactgca
atacgaactctgcaaaatctctcccaacttgatctcagcaacaacatgatcagcactctg
acctgtcaagatttctccaatcagacgagactgaaggaattaagtctgcagaacaactcc
atctttaagttgactgaatgtgctttcaagggtttggtacatctccaaattctcagattg
caatccagtcagattactgatttaaaaggggcttttaaaacctctttgccaaaactgaaa
caactgcttttgaatggaaataaactcactgctattagaaagggggaatttgaaggatta
aagtctctttggagtttgtctctacatcaaaatcaaataaagatccttgataaaggttgc
tttgttggactattgaaccttactgacattaggctccagtcaaatggtattacaactggt
accttaaaaacaagtccgttcaagggtctctctaacctaaaaagattgtatttaaacgat
aatcacatcaaaggttttaatattacaccattttctgatcttcaccagttggaagagttg
tctcttcatggccagcactacaggggaaagtctagcctaccttccaacttcctccatgga
ctaagccgtcttttaagttttaatgctaggaactcccagctaattaatgtcgacaaagac
acatttgtgaacacacctaatctggaaagacttgatttgagctcaaatgacttggagaac
ctgacggcagagctgtttgccccaattcgaaaccttaaaagcctctacatatccagaatt
gctgttcactcactagatttccttgcagaagccaacctgaccaagctggagttcctgcag
ggaagacacaaccaatactcagtcgtgactaaagacataataaagtcgctcccatctctt
cagtatttggattttaaatataatagtttctactgtgagtgcattaatgcctggttcgtc
aactggacaatattcagcaaacggacgcaggttaatgacgcatataactattcttgcaac
tatccagatgacttcaaaggcaaaaagcttttggatttaaaaatcttaaaatcttgctca
caggatgtcaacttcatctgctttgtttcaaccacatctacgatcctcttcgtcatggct
gcatccttcatttaccacttcatgaggtggcagctgtactatgcctattacctcttcttg
ggttggctttttgactcgaagtataaaaataagcaagttcctcatcagtacgatgccttt
atctcctataaccaccacgatgagccttgggtgattggtgaactgttacctaaactggaa
ggagagcagggatggaaattgtgtctgcaccatcgagactttgaaccaggaaagccgatc
acacaaaacatcacggacgccatctacggaagtaggaagaccatctgcgtcatcagcaga
agatacctggagagcgagtggtgctccagagaggtccagacagccagtttccgtctcttt
gacgagcagaaggatgtgctgatcctggtgtttttggaggacattcccacctacctgctg
tctcctttccaccgaatgaggaagctgctgaagaagcagacttatctgagctggccgcgc
gccgcagaccacccagaggtattctgggaaaacctgaggaaggctctgcagaccggaaac
gatccaaatgaggaaaacttcctcagtttgacacaggaatga
DBGET
integrated database retrieval system
