Gambusia affinis (western mosquitofish): 122824024
Help
Entry
122824024 CDS
T07758
Symbol
fen1
Name
(RefSeq) flap endonuclease 1 isoform X1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03030
DNA replication
gaf03410
Base excision repair
gaf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122824024 (fen1)
03410 Base excision repair
122824024 (fen1)
03450 Non-homologous end-joining
122824024 (fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gaf03032
]
122824024 (fen1)
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122824024 (fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gaf04147
]
122824024 (fen1)
DNA replication proteins [BR:
gaf03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
122824024 (fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
122824024 (fen1)
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
122824024 (fen1)
Exosome [BR:
gaf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122824024 (fen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-GeneID:
122824024
NCBI-ProteinID:
XP_043960116
LinkDB
All DBs
Position
LG21:15937774..15942154
Genome browser
AA seq
428 aa
AA seq
DB search
MLQNQLNQSGRRIPRTPGPDGPLGSGNAHREALTLQPNTGDIMDEHLTMGIHGLAKLIAD
HAPGAIKEQDIKNYFGRKIAIDASMCIYQFLIAVRQDGNVLQSEDGETTSHLMGMFYRTI
RMLENGIKPVYVFDGKPPQLKSAELEKRGERRAEAEKMLAKAQELGEQENIDKFSKRLVK
VTKQHNDDCKKLLTLMGVPYIEAPCEAEASCAALVKEGKVFATATEDMDGLTFGTNVLLR
HLTASEAKKLPVQEFHFNRILQDIGLTSEQFVDLCILLGCDYCGTIKGIGPKRAIDLIRQ
HGSIEEILENIDTNKHPAPEDWLYKEARNLFLKPEVVDSSTVDLKWREPDEEALIQFMCS
EKQFSEDRIRNGCKKIMKSRQGSTQGRLDSFFSVTGSLSSKRKEPETKGSAKKKQKTGAT
PGKFKKGK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagaaccaactaaaccagtctggtcgccggattcctcggactccaggccctgac
ggtccgctcggctccggtaacgctcaccgagaagccctaacgctgcagccgaacaccggg
gacatcatggatgagcatctcacaatgggaattcacggactggccaagctaatagctgat
catgcccccggtgccatcaaagaacaggacatcaaaaactacttcggcaggaaaattgct
atcgatgcctccatgtgcatctaccagttcctgattgctgtccgtcaggatgggaacgtt
ctgcagagcgaagatggagagactacaagccacttgatgggaatgttctaccgcacaatc
cgcatgttggagaacgggatcaagcctgtgtatgtgtttgatgggaaacctccacagctc
aagtcagctgagcttgagaagagaggggagagaagagcagaagctgagaaaatgcttgcc
aaagctcaggaattaggtgaacaagagaatattgacaagttctccaagcgactcgtgaaa
gtcaccaagcagcataacgatgattgcaagaagcttctgaccttgatgggcgtgccgtat
atcgaggctccgtgtgaggctgaagccagctgtgctgctctggttaaagaagggaaggtc
tttgctacggcaacggaggatatggacgggctgacctttgggacgaatgtcctactaaga
catctcactgccagtgaagcaaagaagcttcctgttcaggaatttcactttaatcgcatc
ctgcaggacatcggtctgaccagtgagcagttcgtagacctttgtattctgctgggttgt
gactactgcggcaccatcaagggaatcggtcccaagcgagccatcgacctgatccggcag
cacggctccatagaggaaattctggaaaacattgatacaaataagcatccggccccagag
gactggctgtacaaggaagcgaggaatttgtttttgaagccagaggtggtggactcctcc
acagtggacctgaagtggagggagcctgatgaggaggctctgatccaattcatgtgcagt
gagaaacaattcagtgaggacaggatccgtaacggctgtaaaaagatcatgaagagcaga
caaggtagcacacagggaagactggactctttcttttccgtcactggttcactctcctct
aaaaggaaggaaccggagaccaaaggatctgcaaagaagaaacagaaaactggagcaact
ccaggcaaatttaagaagggcaaatag
DBGET
integrated database retrieval system
