Gambusia affinis (western mosquitofish): 122824057
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Entry
122824057 CDS
T07758
Symbol
cngb3.1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3
KO
K04953
cyclic nucleotide gated channel beta 3
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122824057 (cngb3.1)
Ion channels [BR:
gaf04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122824057 (cngb3.1)
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
DUF6033
Motif
Other DBs
NCBI-GeneID:
122824057
NCBI-ProteinID:
XP_043960187
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Position
LG21:16545847..16558164
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AA seq
724 aa
AA seq
DB search
MFSRLRRFLGAPEPPPAPAAAPPAPPAKEEKLTEKKDEKVEEPKATSEKKEEEKNEEKQE
EQINEQKKEEQTTGPAPVPPSPAPIAPVNPEGAEGDEPRVVYSRYADDVLRNVIKSLRER
TEILKEKSIDPYATSPEITPPVTPILRKEDYVRQKEEERIAKEEEDRKKAEEAAKKAEEK
KKKDEEKRLEAEKKAEEERLAEEARRKAKILPDISCSCFDVLFHPVEEKMDTVLGSTIDP
FTDRRYITWLMVVAVAYNYNVWFCPARLAFPYHNATINPFWIVLDVLSDVVNVIDIVVWQ
PRLQFVKAGDIIKDRALTKVHYRKSYRFKTDMVSVIPFDLLSLHFGFSSIYRFNRFLRIE
SFFEFSDRLESIMAKAYIWRVARTTGYLLYMLHLNACAYYVASLHQGLASTTWVYDGKGT
AYLRCYYFAVRSLINIGGLPEPVTLFEIGFQMTNFFVGVFVFSSLIGQMRDVIGAATAAQ
TYFRASMDGCVEYMNTYTIPKLVQNRVRTWYNYTWASQGMLDEMELLDKMPLVMRIAIAV
DINLATFQKIQLFQGCDQQMLVDMLLRLKSIIYLPGDFVVRKGDIGKEMYIIKSGAVQVV
GGPDNSIVFVTLKAGCVFGEISLLQSAKDGGNRRTANVRAYGFANLFVLEKKDLFDILVH
YPESQKVLAKKGRQLVKAKAAAGAPTKDEKPKGLTLFGQKPPTPKLLKAFANLRKLKKAA
EEEQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaggttgaggaggtttctgggcgctcctgagcctccgcctgcccctgcagcc
gccccaccagctccaccagccaaggaggagaagttaacagaaaagaaagatgaaaaagtg
gaggagccaaaggcgacaagtgaaaagaaagaggaggagaaaaatgaagagaaacaagag
gagcaaataaacgagcagaagaaggaagagcagacaactggtcctgctcctgttcctccc
tctccagctcctattgctcctgttaacccggaaggagctgaaggagacgaaccccgggtg
gtctactccagatatgcagatgacgtcctgaggaatgtcataaagagtttaagagaacga
actgaaatactcaaagagaagtctatagacccttatgctacatctccagaaatcactcca
cctgttacacccattttgaggaaagaggactacgtcagacagaaggaagaggagcgcata
gcaaaagaagaagaagacaggaagaaggccgaggaagcggccaaaaaggcggaggagaaa
aagaagaaagacgaggagaaacgactggaggcggagaagaaagcagaggaggagaggctg
gcggaggaggccaggaggaaggcaaagattctgccggacatcagctgctcgtgctttgac
gtcctcttccatccagtcgaggagaagatggacaccgtgttgggaagcaccattgatcct
ttcacggatcgtcggtatatcacctggttgatggtggtagccgttgcgtacaactacaac
gtctggttctgccccgcccggctggccttcccttaccacaatgccactatcaacccgttc
tggatagtgctcgacgtcctctctgacgtcgtcaacgtcattgacatcgtggtttggcag
cctcgactacagtttgtcaaagccggagacattatcaaagacagagctctgaccaaagtg
cattatcggaaatcttatcgatttaagacagacatggtcagcgtcatcccctttgacctt
ctctctctgcacttcggcttctcctccatttacagattcaaccgcttcctcaggatagag
tctttctttgagttcagtgaccgacttgagagtatcatggccaaagcttacatctggagg
gtggcccgtaccacaggttaccttctctacatgctccatctcaacgcctgcgcttactac
gtagcctcattgcaccagggtctggcttcgactacatgggtgtatgatggaaaaggcaca
gcgtacctgcgctgttactactttgcagtacgaagcctcatcaacatcgggggcctcccg
gagccggtgactctgttcgagatcggctttcagatgaccaactttttcgtcggcgtcttt
gtgttctccagcctgattggacagatgagagacgtcataggagcggccacggcagctcag
acgtacttccgcgcgtcgatggacggctgcgtcgagtacatgaacacgtacaccatccca
aagctggtccagaacagagtccgcacctggtacaactacacctgggcttctcagggaatg
ctagatgagatggagcttctggacaagatgcctctggtgatgcgaatcgccatcgctgtg
gatataaacctggccaccttccaaaagatccagctttttcagggctgtgaccagcagatg
ttggtggacatgttgctgaggctgaagtccatcatctacctgccgggagactttgtggtg
aggaagggcgacatcgggaaggagatgtacatcatcaaaagtggagcggtgcaggtggtg
ggaggacccgacaacagcatcgtgttcgtaacgctgaaggccggctgcgtgttcggagaa
atcagcttgctgcaatctgccaaagacggagggaacaggcggacagccaacgtgagagca
tacggctttgccaacctgtttgttctggaaaagaaagacctgttcgacatcctcgtccac
taccccgagtcccagaaggttttggccaagaagggcaggcaactggttaaagccaaagct
gcagccggggctccaaccaaggacgaaaagccgaaaggtctgactctgttcggacagaaa
cccccaacgccgaagctcctcaaagcatttgccaacttgcgcaagctcaagaaagctgca
gaagaggaacaataa
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