Gambusia affinis (western mosquitofish): 122824058
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Entry
122824058 CDS
T07758
Symbol
si:dkey-37o8.1
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122824058 (si:dkey-37o8.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122824058 (si:dkey-37o8.1)
03016 Transfer RNA biogenesis [BR:
gaf03016
]
122824058 (si:dkey-37o8.1)
03012 Translation factors [BR:
gaf03012
]
122824058 (si:dkey-37o8.1)
04131 Membrane trafficking [BR:
gaf04131
]
122824058 (si:dkey-37o8.1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gaf04147
]
122824058 (si:dkey-37o8.1)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122824058 (si:dkey-37o8.1)
Transfer RNA biogenesis [BR:
gaf03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122824058 (si:dkey-37o8.1)
Translation factors [BR:
gaf03012
]
Eukaryotic type
Elongation factors
122824058 (si:dkey-37o8.1)
Membrane trafficking [BR:
gaf04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
122824058 (si:dkey-37o8.1)
Exosome [BR:
gaf04147
]
Exosomal proteins
Proteins found in most exosomes
122824058 (si:dkey-37o8.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Ras
Motif
Other DBs
NCBI-GeneID:
122824058
NCBI-ProteinID:
XP_043960188
LinkDB
All DBs
Position
LG21:complement(7202922..7206470)
Genome browser
AA seq
450 aa
AA seq
DB search
MVREKAHVNVVIIGHVDSGKSTTTGHLVYKCGGVDQRKLEKFEKAAAQMGKSSFKFAWLL
DKLKAERERGITIDISLLKFNTQKYSMTIIDAPGHRDFIKNMITGTSQADVALLVVSAAK
GEYEAGVSRNGQTREHALLAYTLGVKQIIVCVNKMDLTEPPYSQKRYDEVVRGVKIFLKK
IGYDANVVPFIPISGWMGENMIIPTQKMPWYQGWKVRLREGAETGKTLLEVLDSIKPPVR
TMNKPLRLPLQDVYKIGGVGTVPVGKIETGVLKPGMTLMFSPAKLTAEVKSIEMHHQGLD
MALPGHNVGFNIKNVSVKNLQRGDVAGNAQHDPPSDVRSFEAQVIILNHPGRIKTGYSPV
LDCHTTHVTCRFAELKEKLDRRTGKKLEDNPQLLQSGDAATVKLVPIKPMCVESFFTYPP
LGRFAARDLKQTVAVGVIKSVEKEQGSKTP
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggtgagagaaaaggctcacgttaacgtcgtcatcatcggccatgttgacagcggcaaa
tccactaccactggacacctggtctacaagtgtggcggtgtggaccagcggaaactggag
aagtttgagaaagctgcagcccagatggggaagagttcattcaagtttgcctggctgctg
gacaagctgaaggctgagcgggagcgaggaatcactatcgacatctctttgctgaagttt
aacacccagaaatacagcatgaccattattgacgcacctggacacagagacttcatcaaa
aacatgatcactggcacatcccaggctgatgttgccctgctggtcgtctctgcggccaaa
ggggaatatgaagcgggtgtttccaggaatggccagaccagagagcatgccttactggct
tacactctgggcgtcaagcagatcatagtctgtgtgaacaaaatggacctcaccgagccg
ccgtacagccagaaacgctacgacgaagtggtccgaggagtgaagatcttcctcaagaag
atcggctacgacgccaacgtcgtgccctttattccaatctccggctggatgggcgaaaac
atgatcataccaacacaaaagatgccgtggtaccaaggctggaaagtccgactgagggaa
ggtgccgaaaccggaaagactcttctagaagttctggactcgatcaaacctcctgtgcga
acaatgaacaaaccactacggctccctctgcaggatgtctacaaaattggaggtgttggg
acggttccagtgggaaagattgaaactggagtcctcaaaccaggcatgaccttgatgttc
tcccctgccaagctcactgcagaagtgaaatccatagaaatgcaccaccaaggtctggat
atggctctgccagggcacaatgttggctttaacatcaaaaacgtctctgtaaagaacctg
cagcgtggcgatgtggccggcaatgcccagcatgaccctccttctgacgtccgcagcttt
gaagctcaggtaatcatcctgaatcatccagggaggataaagactggctactctcctgtc
ctggactgccacaccactcatgtcacctgccggtttgctgagctgaaggagaaactcgac
cgccgaacagggaagaaactggaggacaacccacagctgctgcagtctggagatgcagct
acagtcaaactggttcccattaagcccatgtgtgtggagagcttcttcacctacccccct
ttaggtcgctttgcagcaagagacctgaagcagacagttgcagttggagtgataaagtct
gtggaaaaggagcaagggtcaaaaactccctag
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