Gambusia affinis (western mosquitofish): 122824086
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Entry
122824086 CDS
T07758
Symbol
dis3l
Name
(RefSeq) DIS3-like exonuclease 1 isoform X1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122824086 (dis3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122824086 (dis3l)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
122824086 (dis3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_CSD1
CSD2
Rrp44_S1
Motif
Other DBs
NCBI-GeneID:
122824086
NCBI-ProteinID:
XP_043960234
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All DBs
Position
LG02:1201566..1212090
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AA seq
1049 aa
AA seq
DB search
MIKTEKVLHLKSSRGRKVRVVREHYLRERVPCFSALCLAGCENDGKVLPGDLTHYVVPDA
EVVLNYLEVLELVELQGVVFTQTACQALHNKGRRFYNRLRNLLKDPRHDCVLFANEFQEF
SYCPREKGESQEKWQTRCVYAAAVWYYNHLAGMMNLVMITEDLDAVSRFSSLNSGVYVIS
LQEYLQSFWPALQAAQDLYGSVRQALQEKEADGSQREFPEHLPAQVLEAGIKSGRFVQGI
LNVSKHRAQSEAFVTSDSLSSKSPDLSAGVLVAGSKSRNRAVHGDLVALELLPKVEWRGK
VTALSEGPADERSGNDDEIQPMPTGHVVGILQRNWRDYVVTFPPRDAAQAQSRAAQRVLA
VPWDRRIPKVRISTQQADALQDHRLVVRIDSWPSTSLYPNGHSVRVLGRAGELETEVQTV
LVENCIHVPPFSEAQLREMPVNSPEKPWAADPAEAAARRDLRQTHLVFSIDPRGCEDVDD
TLSVQRLAGGKLLELGVHIADVTHFVREGSLTDLEARSRATTYYLADRRYDMLPAVLSAD
LCSLLGGVDRYAMSVVWELDAQSLAVTKVWFGRTLIRSSYQLHYELAQALLNGEEVQVPE
LARLDPEERDTKLSELIQALEMLTHIARHLRAQRDRGGALELEGVEVRAQLDQDKNITAL
VPRQPLEVHETVAECMIYANHWVARKIQEAFPYQALLRRHPQPRQELFSQLVDTARARGF
SMDTRTNKALADSLDRAVDPEDPLVNRLLRMMATQAMSQAVYFSTGAQPEDQFYHYGLAL
DRYTHFTSPIRRYADMVVHRLLTAALQQEHGGQRAAEPGKPPAGNKDMEELAEHINSRNR
AAQRAQNLSTGLFQCLFFKERDPETDPRCVADAIIYSIRDNGVLVFIPEYGVKGPVYMRN
KEGLVVTAGPDGTCEWQSGSVRRYSDHITTTSGCGSATFRLFDHITVRISVLSTNCHADT
LTLQVISNQPHLGATPQRPGSPRRSQLVQEVVRLAGEAQEKAARRPELSKEEREFRQSRT
PNLYSLLEEIRELALMDPDAAARAGTVTA
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagaccgagaaggttctgcacctgaagagcagccgaggccggaaggttcgggtg
gttcgggagcactacctgcgggagcgggttccctgcttcagcgcgctgtgcctggcgggc
tgcgagaacgatggcaaagttctgcccggagacctaacccactacgtggttccagacgcc
gaggtggtactgaactacctggaggttctggagctggtggagctgcagggggtcgtgttc
acgcagacggcctgtcaggctctgcacaacaagggccgcaggttctacaaccgtctgagg
aacctgctgaaagacccgcggcacgactgcgtcctgtttgctaacgagttccaggagttc
tcctactgccccagagagaaaggagagagccaagagaaatggcagaccaggtgtgtgtac
gccgccgctgtgtggtactacaaccacctggctgggatgatgaacctggtgatgatcact
gaggacctggacgccgtgtcccggttcagcagcctcaactccggtgtctacgtcatcagc
ctccaggagtacctgcagagcttctggccggcgctgcaggccgcccaggatctgtacgga
tccgtccgccaggcgctgcaggagaaggaggccgacggctcacagagggagtttccagaa
catttacctgctcaggttctggaggccgggatcaagtccggacgcttcgtccagggaatc
ctgaacgtgagcaaacaccgcgctcagagcgaagccttcgtcaccagcgacagtttgtcc
tccaagagcccagacctgagcgccggtgtgttggtggccggttctaagagccggaaccgg
gccgtgcacggcgacctggtggcgctggagctgctgcccaaggtcgagtggcgagggaag
gtcacggctctgagcgaggggccggcggacgagcggagcgggaacgacgacgagatccag
cccatgccgacaggtcacgttgtggggatcctgcagaggaactggagggactacgtggtg
acctttcccccccgggacgcggcgcaggcccagagccgggccgcccagcgcgtcctggcc
gttccctgggaccggcggatccccaaggtccggatcagcacccagcaggccgacgcgctg
caggaccacaggctggtggttcggatcgactcgtggcccagcacgtcgctctatcccaac
ggacacagcgtgcgggttctgggccgggccggggagctggagacggaggtccagacggtc
ctggtggagaactgcatccacgtgccgccgttctccgaagcccagctcagggagatgccg
gtgaattccccggagaaaccgtgggcggcggatccggccgaggcggcggcgcgccgggac
ctgaggcagacccacctggtgttcagcatcgacccgcggggctgcgaggacgtggacgac
acgctgtcggtgcagcgcctggccggcgggaagctgctggagctgggcgtccacatcgcc
gacgtcacgcacttcgtcagggagggatcgctcaccgacctggaggcccggtccagggcc
accacctactacctggcagaccgccgctacgacatgctgcctgctgtcctcagcgctgac
ctttgctccctgctgggcggggtcgacaggtacgccatgagtgttgtgtgggagctggac
gctcagagcctggccgtcaccaaggtgtggttcggccggaccctgatccgctcctcctac
cagctgcactacgagctggcccaggcgctgctgaacggggaggaggtccaggttcctgag
ctggcccggctcgacccggaggagcgggacaccaaactgagtgagctcattcaggcgctg
gagatgctgacgcacatcgccagacacctgcgggctcagagggaccgaggaggagcgctg
gagctggagggagtggaggttcgagcccagctggaccaggacaagaacatcacggcgctg
gttcctcgccagcccctggaggtccatgagaccgtggcagagtgcatgatctacgccaac
cactgggtggcgcgcaagatccaggaggccttcccctaccaggccctgctgaggcgtcac
ccgcagccacgccaggagctgttcagccagctggtggacactgcccgggccagggggttc
tccatggataccaggaccaacaaggctttggccgactctctggaccgagccgtggacccc
gaggacccgctggtgaacaggctcctcagaatgatggccacccaggccatgtctcaggcc
gtgtacttctccactggtgctcagcctgaggaccagttctaccactacggactggctctg
gaccgctacactcacttcacctccccgatccgccgctacgccgacatggtggtgcaccgc
ctgctgaccgccgccctgcagcaggagcatggcggtcagcgggcggctgagcctggcaaa
ccgccggccggcaacaaagacatggaggagctggcagagcacatcaacagcaggaaccgg
gcggcccagcgagcccagaacctttccaccggactcttccagtgcctcttcttcaaagag
cgcgacccagaaacagacccgcgctgcgtggccgacgccatcatctactccatcagggac
aacggcgtgctggtcttcattccagagtatggagtgaagggtccggtctacatgaggaac
aaggagggcctggtggtgacggccggcccggacggtacctgtgagtggcagagcggctcg
gttcgccgctactcggaccacatcaccaccacgtctggctgtggcagcgccaccttcagg
ttgtttgaccacattacggtccggatctccgtcctctccactaactgccacgccgacacg
ctgaccctgcaggtcatcagcaaccagccgcacctcggcgccacgccgcagcggcccggt
tcgccgcgccgcagccaactggtgcaggaagtggtgcggctggccggggaggcgcaggag
aaggcggcgcgccgacccgaactctccaaggaggagcgggagttccggcagagcagaacc
cccaacctgtactccctgctggaggagatccgggagctggcgctgatggacccagacgcc
gccgcgcgggccggcaccgtgacggcgtag
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