Gambusia affinis (western mosquitofish): 122824106
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Entry
122824106 CDS
T07758
Symbol
cars1
Name
(RefSeq) cysteine--tRNA ligase, cytoplasmic isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122824106 (cars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gaf01007
]
122824106 (cars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gaf03016
]
122824106 (cars1)
Enzymes [BR:
gaf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
122824106 (cars1)
Amino acid related enzymes [BR:
gaf01007
]
Aminoacyl-tRNA synthetase
Class I (G)
122824106 (cars1)
Transfer RNA biogenesis [BR:
gaf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122824106 (cars1)
Prokaryotic type
122824106 (cars1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
Arc1p_N_like
Motif
Other DBs
NCBI-GeneID:
122824106
NCBI-ProteinID:
XP_043960269
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All DBs
Position
LG02:complement(1236413..1248766)
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AA seq
819 aa
AA seq
DB search
MSSSPDTAFEFGSLLQINEEAALTAALNDYLTSRSYLAGFGPSQADLRAFRLLPQPPAPQ
HVHALRWYRHISALQQDLSADGSMKEKRVQPPWSPPVGTEVPQLRLYNSLTRTKEPFVPQ
KGNKVTWYCCGPTVYDASHMGHARSYISFDILRRILRDYFKYDVLYCMNITDIDDKIIKR
ARQNFLLERYREKRPQAAQILQDVLNARVPFLEQLASTTDPDKKQMLERLDAAVAAALQP
LQGAMESNAAADVLQPLAEVLLENSKDLLSDWLDRQFGTEVTENSIFSVLPKFWEGEFHR
DMEALNVLPADVLTRVSEYVPEIVEFVRKIVSNGYGYESNGSVYFDTQRFDSSPQHSYAK
LVPEAVGDQKALQEGEGDLSISADRLSEKKSQNDFALWKASKPGEPSWDSPWGKGRPGWH
IECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSEAFFQNDCWVRYFLHTGHLTIAGC
KMSKSLKNFITIKDALAKNTARQLRLAFLMHSWKDTLDYSANTMESAVQYEKFMNEFFLN
VKDILRAPSDLTGRFEKWEAEEAELNSSFYDRKWAVHLALCDNMDTRSAMEEMRLLVGLS
NSYIASRKSAKLRPNRLLLESVASYLTAMMKIFGAIEGSDPIGFPVGGQAVDLESTVMPY
LAVLSDFREDVRKIAREQKVTALLRLCDAVRDDTLPELGVRLEDHEGQPTVVKLVDKETL
LREREEKKKMEEEKKRKKEEAARKKQEQEMAKLAKMKVPPCEMFRSETDKYSRFDETGFP
THDAEGKELSKGQAKKLRKLFEAQEKLHSEYLQTNRNGN
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagctcaccggatacagcctttgagtttggctccttgctgcagattaacgaggag
gccgcgctgacggcggccctcaacgactacctgacctcacgcagctacctggcgggcttc
ggcccctcccaggccgacctgagagcctttaggctcctcccccaaccccccgccccgcag
cacgtccacgctctgcgctggtacagacacatttccgccctgcagcaggacctgagcgca
gacggcagcatgaaggagaagcgggtccagcctccatggtcgccaccggtgggaacagaa
gttcctcagctgcggctctacaacagcctgaccagaaccaaggagccgtttgttccccag
aagggcaacaaggtgacgtggtactgctgcggccccaccgtttacgacgcctcacacatg
ggacatgccaggtcctacatctccttcgacatcctgcggcggatcctgagggattacttc
aagtacgacgtcctctactgcatgaacatcacagacatcgacgacaagatcatcaaacgg
gcccggcagaacttcctcctggagcggtacagagagaagcggccgcaggcggctcagatc
ctgcaggatgtcctgaacgcacgagtgccgttcctggagcagctggcctccaccacggac
ccggataagaagcagatgttggagcgtctggacgccgccgtcgccgccgctctgcagccc
ctgcagggggcgatggagagcaacgcggcggctgacgtgctgcagcctctggctgaggtt
ttgctggagaactcgaaggacttgctgtccgactggctggacaggcagtttggaaccgaa
gtcacagagaactccatcttctccgtcctgccgaagttctgggagggggagttccaccga
gacatggaggccctgaacgttctgcctgccgacgttctgacccgagtcagtgagtacgtg
ccggagatcgtggagtttgtgaggaaaatcgtctccaacggttacgggtacgagtccaac
gggtccgtctacttcgacacccagaggtttgattccagtccgcaacattcgtacgccaag
ctggtaccagaggcggtgggagaccagaaggcgctgcaggagggagaaggcgatctgagc
atctcagcagacagactgagtgagaagaagtcccagaacgacttcgctctgtggaaagcc
tcgaagcccggcgagccgtcctgggactctccgtgggggaagggtcggcccggctggcac
atcgagtgttcggccatggccggctccatcctgggagagtccatggacatccacggagga
ggcttcgacctgcgcttcccccatcatgacaacgagctggcccagtccgaggcgttcttc
cagaacgactgttgggtccgttacttcctgcacaccggccacctgaccatcgccggctgc
aagatgtccaagtctctgaaaaacttcatcaccataaaggacgccctggcgaagaacaca
gcgcgccagctccgcctggccttcctcatgcattcctggaaagacacgctggattactcg
gccaacaccatggagtcggccgtccagtacgagaagttcatgaacgagttcttcctaaac
gtcaaagacatcctgcgggcgccgagcgatctcaccggacgcttcgagaagtgggaggca
gaggaggcggagcttaacagcagtttctacgacaggaagtgggccgttcacctggcgctg
tgtgacaacatggacacccgcagcgccatggaggagatgaggcttctggtcggccttagc
aacagctacatcgccagcaggaagagcgccaagctgaggcccaaccgcctgctgctggag
agcgtcgcctcctacctcaccgccatgatgaagatattcggagccatcgaaggatccgat
cccatcggttttccagtcggaggacaagctgtggatctggagagcacggtgatgccctac
ctggcggttctgtccgacttcagagaggacgtccggaaaatcgcccgagagcagaaagtg
acggcgctgctgcggctctgcgacgccgtccgggacgacacgctgccggagctgggcgtc
cggctggaggaccacgaaggtcagcccaccgtggtgaagctggtggacaaggagacgcta
ctgagggagagagaggagaagaagaagatggaggaggagaagaagcggaagaaggaggaa
gctgccaggaagaagcaggagcaggagatggcgaaactcgccaagatgaaagtccctccg
tgtgagatgtttcgctcagaaacagacaaatattccaggtttgacgagacgggttttccc
actcatgacgccgaaggaaaggagctgagcaaaggccaagccaagaagctgcggaagctg
tttgaggctcaggagaagctccacagcgagtatctgcagacgaaccggaacgggaactga
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