Gambusia affinis (western mosquitofish): 122824116
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Entry
122824116 CDS
T07758
Symbol
shha
Name
(RefSeq) sonic hedgehog protein A
KO
K11988
sonic hedgehog
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
122824116 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gaf01002
]
122824116 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gaf00536
]
122824116 (shha)
Peptidases and inhibitors [BR:
gaf01002
]
Cysteine peptidases
Family C46: hedgehog family
122824116 (shha)
Glycosaminoglycan binding proteins [BR:
gaf00536
]
Heparan sulfate / Heparin
Morphogens
122824116 (shha)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Intein_splicing
Peptidase_M15_3
Hint_2
Vint
Hom_end_hint
Motif
Other DBs
NCBI-GeneID:
122824116
NCBI-ProteinID:
XP_043960286
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Position
LG21:8676601..8686283
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AA seq
411 aa
AA seq
DB search
MHQRWTRIASVALICLSLVSSVMGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGAS
GRYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRMMTQRCKDKLNSLAISVMNQWPG
VKLRVTEGWDEDGHHFDESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKA
HIHCSVKAENSVAAKSGGCFPGSSTVTLQDGTKKPVRDLQPGDRVLAADGDGNPIFTDFI
MFIDRDSTTRRTFYVIETETGQKITLTAAHLIFVARENSTRSATFASDVRPGQKVFVYDG
ERRGVVAMNVKRIYTQEHEGSFAPVTAQGTVVVDQILASCYAVIEDHQLAHWALAPVRIA
HWVSSSLFISRPRVTAHNEGVHWYSKLLYQLGTWLLDDHSIHPLGMSAYPS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagcgctggaccagaatcgcttctgtcgctctcatctgcttgtccttggtgtcc
tccgtgatgggatgcggaccgggcaggggctacggcaggaggagacaccccaagaagctg
acacctctggcgtacaagcagttcatccccaatgtggcggagaagaccctgggggcgagc
ggtagatacgagggcaagatcacacggaactccgagcgctttaaagagctcactcccaat
tataacacagacatcatcttcaaggatgaggagaacacaggagccgacaggatgatgact
cagagatgcaaggacaagctgaactcgctggccatctctgtgatgaaccaatggcctggg
gtgaagctccgggtcacagagggctgggacgaggacgggcaccacttcgacgagtccctg
cactacgagggcagggccgtggacatcaccacctcagacagagacaagagcaaatatggc
accttgtccaggcttgcagtggaagccggattcgactgggtctactatgagtcaaaggcc
cacatccactgctctgtgaaagcagaaaattcagtggcagcaaagtcaggtggctgtttc
ccgggatcctccacagtcaccctgcaggacggcaccaagaagccggtcagagacctccaa
cccggggacagagtcctggctgcggacggcgacggaaacccgatcttcaccgacttcatc
atgttcatagaccgagactccaccaccaggaggaccttctacgtgatcgagaccgagacg
ggccagaagatcaccctcactgctgcgcacctcatctttgtcgcccgcgagaactccacg
cggtcggcgacgttcgccagtgacgtgcgacccggacagaaggtgttcgtctacgacggg
gagcggagaggagtcgtggccatgaacgtgaaacggatttacacgcaagagcacgagggc
tccttcgcgcccgtgacggcacagggaaccgtggtggtggatcagattctggcatcctgt
tacgcggtgatcgaggaccaccagcttgcgcactgggccctggcgcctgttaggatcgcc
cactgggtgtcctcatcgctgttcatctcccggcctcgggtcacggcgcacaacgagggg
gtccactggtactccaaactcctttaccagctggggacgtggctcttggacgaccactcg
atccatccactggggatgtcagcatacccaagctga
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