Gambusia affinis (western mosquitofish): 122824141
Help
Entry
122824141 CDS
T07758
Symbol
itgb1a
Name
(RefSeq) integrin beta-1a isoform X1
KO
K05719
integrin beta 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03271
Virion - Rotavirus
gaf04145
Phagosome
gaf04510
Focal adhesion
gaf04512
ECM-receptor interaction
gaf04514
Cell adhesion molecules
gaf04530
Tight junction
gaf04810
Regulation of actin cytoskeleton
gaf04820
Cytoskeleton in muscle cells
gaf05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
122824141 (itgb1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122824141 (itgb1a)
04514 Cell adhesion molecules
122824141 (itgb1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122824141 (itgb1a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
122824141 (itgb1a)
04530 Tight junction
122824141 (itgb1a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122824141 (itgb1a)
04810 Regulation of actin cytoskeleton
122824141 (itgb1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
122824141 (itgb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122824141 (itgb1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gaf04147
]
122824141 (itgb1a)
04515 Cell adhesion molecules [BR:
gaf04515
]
122824141 (itgb1a)
04090 CD molecules [BR:
gaf04090
]
122824141 (itgb1a)
Membrane trafficking [BR:
gaf04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
122824141 (itgb1a)
Exosome [BR:
gaf04147
]
Exosomal proteins
Proteins found in most exosomes
122824141 (itgb1a)
Cell adhesion molecules [BR:
gaf04515
]
Integrins
Integrin beta subunits
122824141 (itgb1a)
CD molecules [BR:
gaf04090
]
Proteins
122824141 (itgb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
122824141
NCBI-ProteinID:
XP_043960318
LinkDB
All DBs
Position
LG21:19386992..19419596
Genome browser
AA seq
800 aa
AA seq
DB search
MDLKLIFIAFIGLFYCCNSQKEGNECINKNAKHCGECIQTGAKCGWCTDPDFLKQGETVS
SRCDELQSLIKRGCNKTFIENPLGKKDILKDKDVTNRSKEKLRPEDITQVQPQQVRLTLR
SGEPQSFKLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTSLMHEMSKITSDFKIGF
GSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLPLTGNGATFNRLVGEQQISGN
LDSPEGGFDAIMQVAVCGQQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKCHLE
NNVYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYQELKNLIPKSAVGTLSANS
SNVINLIIDAYNALSSEVILENTKVSNNVTIEYTSHCKNGVINKGENGRKCSNISIGDEV
HFNISITSKGCPNQTNPEIIKIKPLGFTEEVEIILHFICECDCHSEAINNSQVCSNGNGT
YECGACRCKDGRVGRECECSSNEVSTEDMDRTCRKDNGTDICSNNGECVCGTCECKPREN
PEERYSGQFCECDNFNCDRSGNKLCGGHGVCECRKCICDPMWNGTACDCSLDQSTCYASN
KQICNGRGRCECGICKCDDPKFQGPTCETCPTCPSVCAEHKECVECRAFGTGVKKETCQK
ECSDFTMHKVPTKDKIPQPTDKSYPVMHCKERDANDCWFYYTYAVTNSTEKVVYVLDEPD
CPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQENPI
YKSPINQFQNPNYGRKGAVL
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggatctgaagctgatcttcattgcatttataggactcttttactgctgtaactctcag
aaagaggggaacgagtgcatcaacaaaaatgccaaacactgcggagagtgcatccagacc
ggagccaaatgtggctggtgtacagacccggacttcctgaaacagggcgagaccgtgtca
agccggtgtgacgagctgcagtctctgataaaacggggctgcaacaagacatttatcgag
aacccgctggggaaaaaggacattctcaaggacaaggatgtgaccaatcgcagcaaagag
aaattgagaccagaggacatcactcaggtccagccccaacaagtcagactcaccctccga
tctggtgagccgcagtccttcaagctgaagtttaagcgggcagaagattaccccatcgac
ctgtactacttgatggacctgtcctactccatgaaggacgatctggagaatgtgaagaac
ctggggaccagtctgatgcatgagatgtcgaagattacgtctgacttcaagataggtttt
ggctcctttgtggagaagacagtcatgccttacatcagcaccactccggccaagctgctg
aatccatgcacgggcgaccagaactgcaccagcccgttcagctacaagaacgtgctgccg
ctgaccggtaatggcgccacgttcaacaggctggtgggggagcagcagatctcggggaac
ctggactcccccgagggcggcttcgacgccatcatgcaagtggccgtgtgtgggcaacag
atcggctggaggaacgtaacccgcctactggtgttttccactgacgcaggattccacttt
gctggcgacggcaagctgggtggcattgtgctgcccaacgacgggaaatgccacctagag
aacaacgtctacaccatgagccactactatgactacccctcaatcgctcacctggttcag
aagctgagtgacaacaacattcagactatttttgccgtcacagaagagttccagcccgtt
taccaggaactgaaaaatctgataccaaagtctgcagtgggcactctgtctgccaactcc
agcaacgtcatcaacctcatcatagatgcttacaatgctctttcctctgaagtgattctg
gagaacaccaaagtttcaaacaacgtgacaatcgagtacacgtctcactgtaagaatgga
gtgatcaataagggcgaaaatggaaggaagtgctccaatatctccattggagacgaggtc
cattttaacatcagcatcacctctaaaggttgtccaaaccaaaccaatcctgagattatc
aagataaagcccctgggattcacagaggaggtggagattatcctccacttcatctgcgag
tgcgactgccacagcgaagccatcaacaacagccaggtctgcagcaacgggaacgggacg
tacgagtgcggagcctgcaggtgcaaagacggtcgcgtgggccgggagtgcgagtgcagc
agcaacgaagtgtccacggaggacatggaccggacctgccgcaaggacaacggcaccgac
atctgcagcaacaacggggagtgcgtgtgcggcacctgcgagtgcaagccgagggagaac
ccggaggagaggtacagcgggcagttctgcgagtgtgacaacttcaactgcgaccgctct
ggaaacaagctctgcggaggacatggcgtctgcgagtgcaggaagtgcatctgtgatccc
atgtggaacggaactgcctgcgactgttccctggaccagagcacgtgttatgccagcaac
aagcagatctgcaacggcaggggacgctgcgaatgcggcatctgcaagtgcgacgacccc
aaattccagggcccgacgtgcgaaacgtgtcccacctgtccttcggtctgcgctgaacac
aaagagtgcgtggagtgccgggcgtttggcactggggtgaagaaggaaacgtgtcagaag
gaatgcagtgacttcaccatgcataaagtgccgaccaaagacaagatcccccagcccacc
gacaaatcctaccccgtcatgcactgcaaggagcgggacgccaacgactgctggttctac
tacacgtacgccgtcaccaacagcacggagaaggtggtctacgtgttggatgagccggac
tgccccacgggcccggacatcatcccgattgtcgcgggcgtggtcgccggcatcgtcctg
atcggcttggcgctgctgctcatctggaagctgctgatgatcatccacgacaggagagag
ttcgccaagttcgagaaggagaagatgaacgccaagtgggatacgcaagaaaacccaatt
tacaagagtccaatcaatcagttccagaacccaaactatggacgtaaaggcgctgtcctt
tga
DBGET
integrated database retrieval system
