Gambusia affinis (western mosquitofish): 122824160
Help
Entry
122824160 CDS
T07758
Symbol
zeb1b
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger E-box-binding homeobox 1b
KO
K09299
zinc finger homeobox protein 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122824160 (zeb1b)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
122824160 (zeb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_15
zf-met
Homeodomain
zf-Di19
HVO_2753_ZBP
Motif
Other DBs
NCBI-GeneID:
122824160
NCBI-ProteinID:
XP_043960368
LinkDB
All DBs
Position
LG21:20422480..20481272
Genome browser
AA seq
1061 aa
AA seq
DB search
MADGPRCKRRKQANPRRTNVTNYNNVLEAGSDSDDEDKLHIVEEEGSLADGADCDSTLPD
EEHPSVPSWDPVKEDCASDGEDDVSTDALVEEMLQQGDTAIIYPEAPDDDLQRQGTPDAS
VHDENGTPDSFSQLLTCPYCARGYKRYSSLKEHIKYRHXHMSVHKGGRDQRHITQSGGNR
KFKCPECGKAFKYKHHLKEHLRIHSGEKPYECSHCKKRFSHSGSYSSHISSKKCISVISV
NSRQRLGGSRNQAQGSPPGLPTSPSVHCGQIREKLEHSKPLQEQLPLNQIKTEPVDYEYK
PAVITPPAMAAMNGGVFSGGAAAPLQGTVQAVVLPTVGLVSPISINLADLQNALKVAVDG
NVIRQVLENNAKGQVNSGLTTQTLHPPQQQLISAISLPIVGQDGNAKLIINYSLDPNQGQ
LTPHNLKKEPVSPAQSAADSIKSQKLPEDLSVRGSRDQAQQKEEKTTTTCLLCENCPGGL
EALHALKHCKKEDLRLNGAGLDKSEAVAALLSDGGLCNHPKNLLSLLKAYFALNAEPSKD
ELVKISDSVSLPIHVVKKWFSKMQQGQISLGAPTPPSEEEDSYESHSVVSLVPGKDTATI
SRSVSQDSPTEATPAEVNGTHSSPASPSPLNLTAGGPTQADTPESTEGPLDLSLPKPARE
EAESMAPAAQVYPSASSRQTTEEEPLNLTCTKKDMSPLSAMGGSPLALYANQPSAKPLDI
VTTMQCLRALTNNSSKQTILIPQLAYTYTTTANSPAGTETHETIHLNGIKEERLDLGSEG
FSVVDEQNDSDSGPARKKMKKTDSGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGIC
SKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKKETQSQAGGQ
ESPAEEDGEVPAERQRQDTAPSLLDSDERGSSTREDEESEEEEEEGVVDMNDIQVVQIED
EEEEDKEERKEEQMEAERQDGTLETEEKEEVDTRQEETRRSVQTEEEEEESDADKDEVTD
KEGGAAEEADREVQEESRGESNRSGVSQDEEETPEEKADTD
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgaggaggaccaacgtg
accaactacaacaatgtgctggaggcaggctcagactcagacgatgaggacaagctgcac
atcgtggaggaggaaggcagcctggcagacggggcagactgcgacagcaccctgccggac
gaagagcacccgagcgtgccgagttgggacccagtgaaggaggactgcgcttcagacggc
gaggatgacgtgagcacggacgccctggtggaagagatgctccagcaaggagacacggcc
atcatctacccagaggccccagacgatgacctccagcgccagggcacccccgacgccagc
gtccatgacgagaacggaacccctgattcgttctcccagctgctcacatgcccgtactgc
gcacggggctacaagcgctacagttccctgaaggagcacatcaagtaccggcatnnccat
atgagcgttcataagggaggacgggatcagaggcacatcacgcagtccggaggcaaccgg
aaattcaagtgtcccgaatgcggcaaagcattcaagtacaagcaccatctgaaggagcac
ctccggattcacagtggagagaaaccctatgagtgctcccactgcaagaagcgcttctcc
cactcaggctcctacagttcccacatcagcagtaagaagtgcatcagcgtcatctcagtg
aacagcagacagcgcctggggggcagcagaaaccaggcccagggttcgccaccggggctg
cccacatccccttcagtccactgcgggcagatcagggagaaactggagcacagcaagccc
ctccaggagcagctgcccctcaaccagatcaagacagagcccgtggattacgagtacaag
ccagcggtaataacgcctccggccatggccgctatgaatggcggagtgttcagcggaggt
gctgctgcccctctgcagggcactgtgcaggcggtggttctgcccacggtggggttggtg
tcccccatcagcatcaacctggcagacctacagaatgccctcaaggtggcagtggacggt
aacgttatacggcaggttctggaaaacaacgccaaaggccaggtgaactcaggcctcacc
actcaaaccctgcacccccctcagcagcagctcatctcagccattagtctgccaattgtg
ggccaggatgggaatgcaaaacttattataaattacagtctggaccccaaccagggccag
ctcacaccccataacctaaagaaagagccagtgtctccggctcagagtgccgctgactct
atcaagtcccagaaactccctgaggatctttcagtcagaggcagcagggaccaggctcag
caaaaagaggaaaagaccactacaacctgtctactgtgtgagaactgtccaggggggctg
gaagcactccatgctctcaagcactgcaagaaagaggatctcagattgaacggagcaggt
ttagataaatctgaggcagttgctgccttgctgtcagatggaggactctgcaaccacccc
aaaaacctcctgtcccttctcaaggcctattttgccttaaatgcagagccctccaaagac
gagctggtcaagatctctgactcagtcagtctgcccatccatgtggtaaagaagtggttt
agcaaaatgcagcagggtcagatatccctgggcgccccaacacccccatcagaagaggag
gactcgtatgaatctcacagtgtggtatcactggtcccagggaaggacacagccactata
agcagatctgtgagtcaggatagccccacagaggctacgccagcagaggtcaacggcact
cacagctcaccggcctcgccctcgccacttaaccttacagctggcggtcccacccaagcc
gacacccctgagagcactgagggacccctggacctgtcgctgccaaagccagccagagaa
gaagcagagagcatggcgcctgcagcccaagtttacccctctgcttcctcccgccagacc
actgaggaggaacctctgaacttaacttgcacaaagaaggacatgtcaccactctcagcc
atggggggaagccccctcgcactgtacgccaaccagccaagtgccaaacccctcgatatt
gtaaccacaatgcaatgcctgcgagcactaaccaacaacagcagcaaacagactattctg
atcccccagctggcttacacatacaccactacagctaacagccctgcagggacagagacg
cacgaaaccatccacctcaatggaatcaaggaggagaggctggatctgggctcagaggga
ttctcagtcgtggacgagcagaacgactccgactcgggcccagcgaggaagaagatgaag
aagacggacagcggcatgtacgcctgcgacctgtgtgacaagatcttccaaaagagcagt
tcgctactgagacacaaatacgaacacacagggaagcgacctcacgagtgcggcatctgc
agcaaggccttcaaacacaaacaccacctgatcgaacacatgcgcctccactcgggggag
aaaccgtaccagtgcgacaagtgcggcaagcgcttctcccactcgggctcctactcccag
cacatgaaccaccgctactcctactgcaagaaggagacacagagccaggccggaggacag
gagagccccgcggaggaggacggcgaggtccccgcagagcggcagaggcaggacacggcg
ccctccctactggactcagacgagcgagggagcagcaccagggaggacgaagagagcgag
gaggaggaggaggagggagtggtggacatgaacgacatccaggtggttcagatagaggac
gaggaggaagaggacaaagaggagagaaaggaggagcagatggaggccgagagacaggac
ggaacattagagacggaggagaaagaggaagtcgacacgaggcaggaggagacgcggcgg
agcgttcagacggaggaggaggaggaggaaagcgacgccgataaagatgaagtgacggat
aaggagggaggtgcagccgaggaggcggacagagaggtccaggaagagagcagaggtgaa
tcgaaccggagcggggtttctcaggacgaggaggagacgccggaggagaaagcagacaca
gactga
DBGET
integrated database retrieval system
