Gambusia affinis (western mosquitofish): 122824171
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Entry
122824171 CDS
T07758
Symbol
trpa1b
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1b
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122824171 (trpa1b)
Ion channels [BR:
gaf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122824171 (trpa1b)
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Ank_KRIT1
DUF4160
Motif
Other DBs
NCBI-GeneID:
122824171
NCBI-ProteinID:
XP_043960389
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Position
LG21:complement(12030283..12048912)
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AA seq
1117 aa
AA seq
DB search
MNFSRDVARQTSCYTYVIEDEDSALASLNAVELAEKGDLTLLENLVRKSPEVLGEKDECG
ASPLHHAAAGGHVTLIQFITSVIDPQELNSCDDQGNVPLHWAVEKNKAESCRALMDLGAN
PNILNNALLSPLHLAVSLGHNSLLGVLLSYSVTNCNLQGDLGNTPLILACSLNNCEALNI
LLKHGAMLCTQNKLGHFAMHAAAFAGAKKAMEVILKAGEENGHNAVSHINYLDKSNSSPL
HLAVRGGNFETIRLCIATGAKIDQQQNDRCTPLHLGCTQGAIEVVKLMLSTVDRVEDVIN
LTDGACQTPLHRATIFDHAELAEHLISLGSDLNSTDCKGNTPLLLATSCGAWKTVALLLS
KGANVNVKDKCGCNFLHLAILQPKGLKNLPEEVLQCKSVKALLNCEDNEGCTPLHYACRL
GIHDSVKNMLGLSGQVGLACKSKDKKSALHFAAQYGRINTCHRLLESITDSRLLNEGDER
GLTPLHLASKGGHTKVVQLLLRKGALFHSDYKGWSCLHHAASEGYTQTMDILLSANPKLL
DKTDEDGNTALHIAARSGHVAAVRMMLVRGAEIVLNKNDTSFLHEALQNGKKEVVNAVID
SERIEEALRLFVPGSTQRCPILDMIEFLPECCKHLLDRCMRESDDDHNSPDYHIEYDFRW
LQAPISQTLIEQGYPPKPLAAVNAMVQYNRIELLNHPVCKKYLGMKWVAYGSKAHLLNMF
LYLLGLLPLTNLIVTLRPSVNTTETGELDIIMVPTSFREQSMFLSFCMVMVLITNIYSIG
KEVVQISQQRWSYFRDGSNQIDWMSAICSLLFVIPLMVNAEGSWHWQAGALAVLNSWIGF
LLYLQRFEGVGIYVVMFGEIMRTLLRILMLFVYLMLAFSLAFHALMLNQKEFNSVPLSVI
QTFVMMVGELNYQNNFLEAYLNNELPFGFLTYAIFVHFVLLMPILLVNLMIGLAVGDIAE
VQRNASLKRIAMQIDLHTSLEDKLPYWFMKRVDKPSVTIYPNRKCSKHFLKQMISGEDER
SEVWTRLQSKSQSCTFVENELKRQKTRMKEMSVLLEKQHCLLKLIIQKMEICSEAEESDG
PVTVRSSMWPSLGHGKTRGRSTSRWVPLIKAIEAKRK
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcagcagagatgtagcacgccagaccagttgttatacgtacgtcatagaggat
gaagactcagccctggcaagtctaaatgcagttgagttggcagaaaagggggacctgacg
cttctggagaacctggtgaggaagagcccagaggtcctcggtgagaaagatgaatgtgga
gctagtcccctccatcatgctgctgcagggggccacgtcaccctcattcaatttatcacc
tctgtcatagatccccaagagctgaacagctgtgatgaccagggcaatgtccctctgcac
tgggccgtggagaagaacaaagcagagagctgcagggccctcatggacctaggagccaac
cccaacatcctcaataatgctctcctgtcccccctgcacctggcggtcagcctcggacac
aacagcctgttgggggtgcttttatcctacagtgtgacaaactgcaacctacaaggagac
cttggtaacaccccactaatactggcctgctctctcaacaactgtgaagctttgaacata
ctgctaaagcatggggccatgctctgcacccagaacaagctaggccattttgccatgcat
gctgctgccttcgcgggagcaaagaaagccatggaagtcattctgaaggctggagaagag
aatggccacaatgcagtgtcccacatcaactacctagataagtccaatagcagccctctc
catctggctgtgcgtggagggaatttcgaaaccatccgtctctgcattgccactggggcc
aaaatagaccagcaacagaatgatcgctgcacgcctcttcatttgggctgcactcagggt
gctatagaggtagtgaaactgatgctgtccactgtggaccgagtggaagatgttatcaac
ctgactgatggggcttgccagacccctctgcatagggctacaatatttgaccatgcggag
ctggcggagcacctaatttctttgggttctgacctgaacagcactgactgtaaaggaaac
actcctttgttgttggcaaccagctgtggagcatggaaaactgtagctctgctgctgtcc
aaaggggccaatgtgaatgtgaaagacaaatgtggctgtaactttcttcacctggccatc
ctgcagcctaagggtctgaaaaacctcccagaagaagtgctacagtgtaagagcgtgaaa
gctttgttgaactgcgaagataacgagggctgcacaccactgcactatgcctgcagactg
ggtatccatgactcggtgaagaacatgctgggcctctcagggcaagttggccttgcatgc
aagtccaaagacaagaaatctgcccttcactttgctgcacaatatgggcgcatcaacacc
tgccacaggttgctggagtccatcacagactctcgtctgctaaacgaaggtgatgagaga
ggcctgacgccgctccatttggcttccaagggcgggcacaccaaggtggttcagttgtta
ctgcgcaaaggagctctttttcacagtgattacaaaggctggagttgtctacaccatgct
gcctctgaaggatacacacaaactatggatatactgctctctgcaaatcccaagttattg
gataaaaccgatgaggatgggaacactgcactccatatcgctgcgagatctggacatgtg
gctgcagtcagaatgatgttggtcagaggggctgagattgttttgaacaagaatgacact
tcctttcttcatgaagcgctgcagaatgggaaaaaagaagtggtcaatgctgtaattgac
agcgaaaggattgaggaggctttgcgactgtttgttccaggttccacccaacgatgcccc
attctcgacatgattgaatttctgcctgagtgctgcaagcatcttcttgaccgctgcatg
agggagtctgatgatgatcacaacagccctgactaccatattgaatatgacttcagatgg
ctgcaggctcccatttcgcagacgttgattgagcagggctatcctcctaagccactagcc
gcagtcaatgcaatggtgcaatataaccgcattgagctcctcaaccacccagtctgcaaa
aagtatctgggaatgaaatgggttgcctatgggagcaaagctcatctgctcaacatgttt
ctgtacctgttagggctcctacccttgacaaacctgatagtgacccttcgaccttctgta
aacaccaccgagacaggtgaactcgacatcatcatggttcccacttcattcagagagcaa
agtatgttcttgtcattctgcatggtgatggtcttgatcactaacatctattctattgga
aaagaagtggtacagatatcacagcagcgctggagttacttcagggacggttcaaaccag
attgactggatgtcggccatctgctctcttttgttcgtcattcccctcatggtcaacgca
gaaggttcttggcactggcaagcaggcgcattggccgttttaaactcctggattgggttt
ctcctttatctccagaggtttgagggggttggcatttatgttgtgatgtttggggagatc
atgaggacattgctccgtattctgatgctgtttgtgtacctaatgttggcgttcagtttg
gcattccacgctctgatgctcaaccagaaagagtttaacagtgtgccactctctgtaatc
caaacctttgtgatgatggtcggagagttgaactaccagaacaacttcctggaagcttat
ttgaacaatgagcttccatttggtttcttgacgtatgccatttttgtgcactttgttctg
ctcatgccaatcctcttggtgaacctgatgattggtttagcagtcggagacattgctgaa
gttcagagaaatgcttccctgaaacgaatagcgatgcagattgatctccacacatccctc
gaagacaagctcccttactggtttatgaagcgagtggacaaaccctcagtcaccatctac
cccaatcgcaaatgctccaagcacttcctaaaacaaatgatttctggtgaggacgaaaga
agtgaagtctggactcgtctgcagtccaaatcacagagctgcacatttgtggagaatgag
ctcaaaaggcagaagaccaggatgaaagaaatgtcggtcctgttggagaagcagcactgc
ctcttaaagctcatcatccagaagatggaaatctgctctgaggccgaggagtccgatggc
cctgtgacagtcaggagcagcatgtggcccagcttgggtcatggcaaaacaagagggcgc
agcacgtcacgctgggtaccgctgattaaggccatcgaggccaaacgcaagtag
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