Gambusia affinis (western mosquitofish): 122824224
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Entry
122824224 CDS
T07758
Symbol
prpf4bb
Name
(RefSeq) pre-mRNA processing factor 4Bb isoform X1
KO
K08827
serine/threonine-protein kinase PRP4 [EC:
2.7.11.1
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gaf01001
]
122824224 (prpf4bb)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gaf03041
]
122824224 (prpf4bb)
Enzymes [BR:
gaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
122824224 (prpf4bb)
Protein kinases [BR:
gaf01001
]
Serine/threonine kinases: CMGC group
DYRK family [OT]
122824224 (prpf4bb)
Spliceosome [BR:
gaf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122824224 (prpf4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Pox_ser-thr_kin
CoV_S1_C
CSTF_C
Motif
Other DBs
NCBI-GeneID:
122824224
NCBI-ProteinID:
XP_043960511
LinkDB
All DBs
Position
LG21:6561163..6571989
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AA seq
1014 aa
AA seq
DB search
MADVEMDIMSRRMNNGNEHVKQDLETNERSGNEDSGDLSEEEGEEEQAGTNGEKTEEGSK
HHSSSSGKHKRKKHKHRSKHKKHKHAAEEDKDKKRKHRHKHRKHKRKETSSPAEDAPFGS
AGNRKVESSPSSGNPSLDDRAVLEDLEKQRALIKAELDSQLMEGKVQSGMGLILQGYNSG
SEEDGEARFRNGEQRPRGSSGKFISPRGEKSGKSRRDSTDGSKSVSKRRSRSKSADKAAK
ETKPDKGTKSSKEAAVKDRSRARSRSKDRKQSASTDRFKEKKKSNSPPSFRNEQKVSRTE
KRSPPQREERPNQDRTSRRSKSPVRERPSRSDADRDKRPAKSPSKDTSLGKENRSPHRRG
AHSPARKRSASPRHRDTHHTSASASDRTSKHSPPRRSPPRRARSRSPDARRREADRQDSP
LRKRSRADAGPLGDRTREKSPRSVSRRRVSRSPLRRRSPSPPRRSRSSPRRRSRSPLRRR
SGERDRYGRLRQYRRSMSRNRERRRRRSRDEDKFKGSLSEGMKLDQESSDDEMLEDFEGE
EIDEEALIEQRRQQRMAIVQKYKTANEETNMVSEPSSPQSSTRSRSPSPDDILERVAADV
KEYERENLNTFEASIKAKHNLIAQEKDAANPKKPSAPDMFTESDDMFAAHFDSARMRAAG
VGKDFKENPNLRDNWTDAEGYYRVNIGETLDKRYDVYGYTGQGVFSNVIRARDTARAGQE
VAVKIIRNNELMQKTGLKELEFLRKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMN
LREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTILKLC
DFGSASHVADNDITPYLVSRFYRAPEIIIGKPYDYGIDMWSVGCTLYELYTGKILLPGSS
NNHMLKLAMDLKGKMPNKMIRKGLFKDQHFDQNLNFLYIEVDKVTEREKVTVMSTMNPTK
DLLAELIGGQRLPEDQRKKVMQLKDLLESTLMLDPAKRISINQALQHPFIQEKI
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgttgagatggacatcatgtccagaagaatgaataatggcaacgaacacgta
aagcaagacctggagacaaatgagagaagcggaaatgaagacagtggagacttgtcagaa
gaagaaggagaagaggagcaagctggaactaatggtgagaagactgaggaagggtccaag
catcacagcagtagcagtgggaaacacaagaggaaaaaacacaaacatcgcagcaaacac
aaaaagcacaaacacgcagccgaggaagacaaggacaagaagcgtaagcatcgtcacaaa
catcggaaacataaacgcaaagagacctcctcccccgctgaagacgcccccttcggctcg
gccggcaacagaaaggtggaatcctctccgtcctccggaaacccgagtctggacgaccgg
gccgtgttggaggacctggagaagcagagggccctgatcaaagctgaactggacagccag
ttgatggagggtaaggttcagtctggcatgggcttgatcctacaggggtataactccgga
tccgaggaggacggagaggcgaggttcagaaacggagaacagcgtccaaggggcagctca
ggtaaattcatatctcccagaggggaaaaaagtggaaaatctagaagggactcaacagat
ggcagtaaatccgtctccaagcgtcgcagccggagcaagtctgcagataaagctgctaag
gagacaaagccggacaaggggaccaaaagcagcaaggaagctgcggttaaagaccgaagc
cgagcaaggagcaggtcaaaagacagaaaacagtcagccagcacagatcgcttcaaggag
aaaaagaagtccaattcccctcccagcttcaggaacgagcagaaggtgagtcgcactgaa
aagcgttcgcctcctcagcgagaagaaagaccaaatcaggacagaacgagccgacgctcc
aaatcgccagtccgagaacggccgagtcgctcagatgctgaccgtgacaaacggccggca
aagtcgccgtccaaggatacttcactggggaaagagaaccgctcccctcacagacgagga
gcccacagcccagcaaggaaacgcagcgcctccccccgccacagagacacccaccacacc
tcggccagcgcctcggaccggacttcaaaacattctccacctagaaggtctccgcccagg
agagcgcgcagtcgctcaccggacgccaggaggagggaggcggacagacaggactctcct
ctaagaaagcgatctcgggccgatgccggaccactcggagacagaacacgggagaagagc
cccaggtctgtgtctcgtcgtagagtgagtcgctctcctctgaggaggaggtctccgtcg
ccaccacgacgctctcgctcctcgcctcgcaggcgaagcaggtctccactcaggcgcagg
tctggtgagagagaccggtatggaagactccgccagtatcggcgctcaatgtcccggaat
agggagagaagaagacggcgcagcagagatgaagacaagttcaaaggaagcctttcagag
ggaatgaaacttgaccaggaatcctcagacgatgaaatgttggaagactttgaaggtgag
gagatagatgaagaagctcttattgagcaacgccgtcagcagcgcatggccatcgtgcag
aaatacaagacagcgaacgaggagaccaacatggtgtcggagcccagcagccctcagagc
agcacacgtagccgatcgccttcacccgacgacatcttggagcgcgtcgccgccgacgtc
aaggagtacgaacgggagaatctcaacacgtttgaggccagcatcaaagccaagcacaac
ctcatcgcccaggagaaagatgcagccaacccaaagaagccttcggcccccgacatgttt
acagagtcagatgacatgtttgctgctcacttcgacagcgccagaatgagagcagcaggt
gtcggaaaggacttcaaggagaaccccaaccttagggacaactggaccgacgctgagggt
tactacagggtaaacattggcgagacgttagacaagcgctatgatgtttacggctacaca
ggccaaggtgtgtttagcaacgtgatcagagccagggacactgccagagctggccaggag
gtggcggtcaagatcatccgaaacaacgagctcatgcagaaaaccggtttgaaagagttg
gagttcctcaggaagctgaacgatgctgatcccgacgacaaattccactgccttcgcctt
ttccggcatttctatcataagcagcatctttgtcttgttttcgagcctctgagcatgaat
ttgcgagaggtgctgaagaaatacggcaaagacgtcgggctccacatcaaagccgttcga
tcgtacagccagcagctcttcttggccctcaagctgctcaaacgatgcaacatcctccat
gctgacatcaagccagacaacatcttggtgaacgagtccaaaaccatcctgaagctctgt
gactttggatctgcatcacatgttgctgacaatgacatcacaccatatctggtcagccgg
ttttacagagctccagaaattatcatagggaagccttacgactatggcatcgacatgtgg
tccgttggctgcactttatacgagctgtacaccggcaaaatcctgcttcctggatcttcc
aacaatcacatgctgaagctggcgatggacctcaagggcaagatgcccaacaagatgata
cgtaaaggcttgttcaaagaccagcacttcgatcagaacttgaacttcctgtacattgaa
gtagacaaagtgactgaaagggagaaagtgactgtaatgagcaccatgaaccccaccaaa
gacctgctggcggagctgataggcggtcagcgacttcctgaggaccagaggaagaaggtc
atgcagctgaaggacctgctggagagcacgctgatgctggacccggctaagcgtatcagc
ataaaccaggctctgcagcacccttttatccaggagaaaatctaa
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