Gambusia affinis (western mosquitofish): 122824288
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Entry
122824288 CDS
T07758
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122824288 (trpc1)
Ion channels [BR:
gaf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122824288 (trpc1)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
MTR4-like_stalk
Motif
Other DBs
NCBI-GeneID:
122824288
NCBI-ProteinID:
XP_043960640
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Position
LG21:complement(9181298..9198304)
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AA seq
799 aa
AA seq
DB search
MHISAWPYSLSVVMAALYQGTDTSSPDKFLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEENRHGELNVNCVDVLGRDAVTITIENENLDILQLLLEHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECMLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELSA
DLKELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSSEDHVDKRGLME
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGEMASYRRKHTCLKMGTVLSLALLWP
LLSVCYLLVPRSRVGQIIHTPFVKFIIHSASYFSFLLLLNLYSLVYNEGKKNTMGPALEM
IDYLLILWIIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFTLKIVAHSKFKN
DPDTERKNWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKF
LGLFLLVLFSFTIGLTQLYGKDHAKDTKDQIKQTKDCEGIFCQQQSNDAFHTFMGTCYAL
FWYIFSLAHVALFVTRISYTEELRSFVGALIIGTYNIVVVIVLTKLLVAMLHKSFRQIAN
HEDKEWKFARAKLWLSYFDDKCTLPPPLNVLTSPKTVCYLVTSLRKWICSHTTKGKVKRQ
NSLKEWKNLKQKHDENYQKIMCCLVHRYLTSTRQKMQSMDQATVENLNDLRQDLSKFRNE
MRDLLGFRTSKYAMFYPRN
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgcttggccgtactcactctccgtcgtaatggcagctctgtaccagggc
acggatacctcctcccccgacaaattcctggccttgaaagacgtgagagaagtaaaagag
gagacgacgctggacgagaagctcttcctgctggcatgcgagaaaggtgactattacatg
gtgaagaagctgctggaggagaaccgccacggggagctcaacgtcaactgtgtggatgtg
ctgggccgggatgcggtgaccatcactattgagaacgaaaacctggacatcctgcagctt
ctgctcgagcacggctgccaggccacagatgccttgcttgtggccatagactcggaggtt
gtgggtgctgtggacatcctcctcaaccacagaccaagacgctcctccaagccctctatc
gctaaactaatgcagcggatccagaacccagagtactccaccaccatggatgtggctcct
gtaatcctggcagcacacagaaataattatgagatcctcaccatgctgctaaaacaggat
atctccctccctcggcctcacgctgtaggctgcgagtgcatgctgtgcaatgctaaaaac
aagaaggacagcttaaggcactccaggttccgactcgacatctaccgctgcctggcaagc
ccctctcttatcatgctgaccgaggaggaccccatactacgagcatttgagcttagcgca
gacctgaaggagctcagccttgtcgaggttgaattcaggaatgactacgaagaactggcg
aaacagtgcaaaatgtttgccaaggatcttctggctcaggctcgaaactctcgagagctg
gaagtaattctcaatcacacctccagcgaagatcatgttgacaagaggggcctgatggag
gagcgcatgaaccttagtcggcttaagttggccatcaagtacaaccaaaaagagttcgtg
gctcagtccaactgtcagcagttcctcaacaccgtctggtttggagagatggccagctac
cgacggaagcacacctgtttgaagatgggcacggtcctgagcctggcgctgctctggccg
ctcctctctgtgtgctacctgctggtgccccgctcccgagtcggccagataatccacacg
ccattcgtgaagttcatcatccacagcgcctcctatttcagctttctgctgctgctcaac
ctgtattctctggtctacaatgagggcaagaagaacacaatgggccctgcactcgagatg
attgattacctgctgatcctctggatcataggaatggtgtggtcggacgtgaaacgtttg
tggtacgaaggtctggaagactttctggaagagtccaggaaccagctcagttttgtgatg
aattctctctacctggcaaccttcactcttaaaatagttgctcatagcaagttcaaaaat
gatccagacacagagaggaagaactgggacgccttccatcccatcctggttgctgagggc
ctcttcgccttcgccaacgttctcagttacctgagactcttcttcatgtacaccaccagc
tccattcttgggccactgcagatctccatgggtcagatgctgcaggagtttggaaagttt
ctgggcctcttcctgcttgtgttattctccttcaccattgggctgacccagctctatgga
aaagaccacgctaaagacacaaaggaccagattaaacaaaccaaggactgtgagggcatc
ttctgccagcaacagagcaacgatgcatttcacacgtttatggggacctgctatgctcta
ttctggtacattttctccttggcgcacgttgcgctcttcgtcacccgcatcagctacaca
gaggagctgcgctcctttgttggtgccctaatcataggcacctacaacatcgtagtggtt
atcgtgctgaccaagctgctcgtggccatgctccataaaagtttcagacaaattgctaat
catgaggataaggagtggaagtttgcacgggccaaactgtggctcagttactttgacgac
aagtgtaccctgcccccaccactcaatgtcctaacctcgccaaaaaccgtctgctacctg
gtcaccagcctgaggaagtggatctgttctcacactacaaagggcaaagtgaaaagacag
aacagtctcaaggagtggaagaacctgaaacagaagcatgatgagaactaccagaaaatc
atgtgctgtctagtacaccgctacctgacctccacgaggcagaagatgcagagcatggat
caagccacggtggaaaatctgaacgacctacgccaagacctgtccaagtttcgcaacgag
atgagggatctgctgggcttccggacatccaaatacgccatgttctacccaaggaactaa
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