Gambusia affinis (western mosquitofish): 122824501
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Entry
122824501 CDS
T07758
Symbol
drosha
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122824501 (drosha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122824501 (drosha)
03009 Ribosome biogenesis [BR:
gaf03009
]
122824501 (drosha)
03036 Chromosome and associated proteins [BR:
gaf03036
]
122824501 (drosha)
Enzymes [BR:
gaf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
122824501 (drosha)
Messenger RNA biogenesis [BR:
gaf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
122824501 (drosha)
Ribosome biogenesis [BR:
gaf03009
]
Eukaryotic type
90S particles
RNase
122824501 (drosha)
Prokaryotic type
rRNA processing factors
122824501 (drosha)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
122824501 (drosha)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Cro
YcaO
Motif
Other DBs
NCBI-GeneID:
122824501
NCBI-ProteinID:
XP_043961162
LinkDB
All DBs
Position
LG21:2576635..2706375
Genome browser
AA seq
1311 aa
AA seq
DB search
MSFQADRGGMRGQMPPGQNYLSPPAPQPPAPPYHYDPQTPPGSGYHGSAGCMPHHPDFMQ
YPPPAPSQQTSGALRQCPLRPPFPKPPPNFPPPPLPSSAGGPTPGSQVSVQTSYPPYMMP
PPPLPHPTMPPPMSYHPPYPMNYPPFPPPPFNPGYAQTAGPFQLDHGVRHGGPYPYEKSA
DSRRSPERGYRHDDHRQKSYGERHKMEFSAERKERGRSPDRRGRAEGGRYKADYDRGRSP
PRHRSRERSRERYRHRDVRRSQSPDRYRKRPRSRSTSRERKRGRWEEEKERRSDGSSGPS
RDRSYPSLRSRDSDEAFGERDRQRDREKEKYDEEEEQLKPAWIRCTHAESYYSNDPMDQV
GDSTVVGTSKLRDLYERFEDELVKRQERAKAARPKWEPPKTKLDEDPDDSSSESDCESDG
DGSSCSSTSDSEVFDVIAEIKRKKAHPDRLHEELWYNDPGQMNDGPLCKCSAKARRTGIR
HSIYPGEEPVKQCRPMNNNAGKLFHYRITVSPPTNFLTDRPTVIEYDDHEYLFEGFSLFS
HTPLTNIPLCRVIRFNIDYTIHFIEEMTPENYCVRGLELFASYLFRDILELYDWNLTGPD
CDSESSGCQHFHFMPRFVRFLPDGGKEVLSMHQVLLYLLRSSKALVPEEEIADMLQWEQL
DWQKYAEECKGMIVTNPGMKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPAQLSYAGDP
QYQKLWKSYVKLRHLLANSPKVKQIDKQKLTQREEALQKIRQKNTMRREVTVELSSQGFW
KTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYVFKDRCLLQLAMTHPSHHLNFGM
NPDHARNSLSNCGIRQPKYGDRKVHHMYMRKKGINTLINIMSRLGQDDPSPSRINHNERL
EFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRFMLYAHGP
DLCRESDLRHAMANCFEALIGAVYLEGGLEEARQLFGRLLFNTEDLREVWLHYPPHPLQV
QEPQSDRQLIETSPVLQKLTSFEDSIGVLFTHVRLLARAFTLRTVGFNHLTLGHNQRMEF
LGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEFAITNDKTKR
PVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQC
CLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDA
LEKYNFPQMAHQKRFIERKYRQELKEMRRERERQEKETDDGGAAAAAEARK
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgtccttccaggcggaccgtgggggtatgaggggacagatgccccccggccagaactac
ctgagccctcccgctccccagcctcctgctccaccgtaccattacgacccacagactccg
ccaggttcgggttaccatggcagcgccggctgcatgccccaccaccctgacttcatgcag
taccctcccccggctccgtcgcagcagacctccggcgctctgaggcagtgcccgctgcgc
ccgcctttccccaaaccccctcccaatttcccgcctccccctttgcccagctcagcaggg
ggtccgacgcccggctcccaagtgtctgttcagacctcctaccctccctacatgatgcct
ccgcccccgctgcctcacccaaccatgcctccgcccatgagctaccaccccccgtacccc
atgaactaccctcctttccctcctccgcccttcaaccctggctacgcccagaccgctggc
cccttccagctggaccacggtgtgcgacacggggggccgtacccgtacgagaagtccgct
gacagccggaggtcaccggaaagagggtatcgccatgacgaccacaggcagaagagctac
ggcgagcggcacaaaatggagttcagcgcagagaggaaggagcgcgggaggagtccagac
cggcgcgggagggcggagggggggcgctacaaagctgactacgacagagggaggagtcca
ccacgacaccggagtcgcgagaggagcagggagcggtaccgccaccgagatgtccgtcga
tcccagtcacctgatcgctacaggaagagacctcggagccgctcaacgagccgagaaaga
aagcgagggcgctgggaggaggagaaggagcggaggtccgacggctcctcggggccgagc
cgggaccggagctacccgtccctccggagccgggactcggacgaggcgttcggcgagcgc
gatcggcagcgggacagagagaaggagaagtacgacgaggaggaagagcagctgaaaccc
gcctggatccgctgcactcacgccgagagctactactccaacgaccccatggaccaagtg
ggcgactccacggtcgtgggaaccagcaaactgcgcgacctttacgaacgcttcgaggac
gaactggtgaagaggcaggaacgagccaaagccgctcgacccaaatgggagccgcctaaa
accaaactggacgaggatccagacgacagcagcagcgagtcggactgcgagtcggacggc
gacggcagcagctgctccagcacctccgactccgaggtttttgacgtcatcgctgagatc
aagcggaagaaggcgcatccggaccgcctgcacgaggagctgtggtacaacgacccgggg
cagatgaatgatggccccctgtgcaagtgcagcgccaaggccagacgaacggggatccgc
cacagcatctaccccggagaggagcctgtgaagcagtgccgccccatgaacaacaacgcc
gggaaactgttccactacaggatcacggtgtctccccccaccaacttcctgaccgaccgg
ccgacagtgatagagtacgatgaccacgagtatctgttcgaaggattctctctgttctcc
cacactcctctcaccaacattccattgtgccgagtgatccgcttcaacatagattacact
attcacttcatagaggagatgacaccggagaactactgcgtccgaggtttggagctgttc
gcctcctacttgttccgggacattctggagctttacgactggaacctgacgggtcctgac
tgcgactctgagtcttctggatgccagcacttccatttcatgcctcgttttgtcagattc
ttaccggacggcgggaaggaggttctgtcgatgcaccaggtgctgctgtacctcctgcgc
agcagcaaggcgctggttccagaagaggagatcgcagacatgctgcagtgggagcagctg
gactggcagaaatacgcagaggagtgcaaaggcatgatcgtcaccaaccccggcatgaag
ccgagctcggtgcgcatcgaccagctggacagggagcagttcaacccagacgtcatcacc
ttccccatcatcgttcacttcggcatccggcccgctcagctcagctacgccggagacccc
cagtaccagaagctgtggaagagttatgtgaaactgcgccacctgctggcgaacagccca
aaggtcaagcagatcgacaagcagaagctgacgcagagagaggaagctctgcagaagatc
cggcagaagaacacgatgcgccgtgaggtgactgtggagctcagcagccagggcttctgg
aaaaccggcatccgctccgacgtctgccagcacgccatgatgctcccggttctcacccat
cacatccgataccaccagtgcctgatgcacctggacaagctaatcggctacgtcttcaag
gaccgctgcctccttcagctggccatgactcatcccagtcaccacctcaactttggcatg
aatcccgatcacgcccgcaactcgctgtccaactgtggcatccgccaaccgaaatacggc
gacaggaaggtccaccacatgtacatgaggaagaaaggaatcaacacactgattaacatc
atgtcccgtctgggtcaggatgacccgtctccttccaggatcaatcacaacgagaggctg
gagttcctgggcgacgctgttgtcgagttcctcaccagtgtccacctctactacctgttc
cccagtctggaggagggcggcctggccacctacaggacggccatcgttcagaaccagcac
ttagccatgctggccaagaagctggagttggatcgcttcatgctctacgcccacggaccc
gacctgtgccgggagtcggaccttcgacatgccatggccaactgcttcgaggcgctcatc
ggggctgtgtatctagagggaggcttggaagaggcccggcagcttttcgggcgactgctt
ttcaacactgaggacctgcgggaggtctggctccactacccacctcaccccctgcaggtg
caggagccgcagtcggaccgtcagttgattgaaacgtctccagttcttcagaaactcacc
agcttcgaagattcgatcggagtcttgttcacgcatgtccgcctgttggccagagcgttc
accttgaggacagtcggcttcaaccacctcaccctaggccacaaccagaggatggagttc
ctcggagactccatcatgcagctggtcgccaccgaatatctcttcatccacttccctgac
caccatgaaggacacttaactcttctccgcagctcgttggtgaacaaccggactcaggcc
aaagtggcagaagagctgggcatgcaggagttcgccatcaccaacgacaaaaccaaacgg
cccgtcgcgctgcgcacaaagactctggctgacctgttggagtctttcatcgcggctctc
tacatcgacaaagacctggagtacgttcacaccttcatgaacgtctgctttttccctcgg
ctgaaggagtttattttgaaccaggactggaacgaccccaaatctcagctgcagcagtgc
tgtttgaccctgagaacggagggcaaggagcccgacatcccgctgtacaagacgctgcag
acggtcgggccgtcgcacgcccggacgtacacggtcgccgtctacttcaaaggagaacgc
atcggctgtggcaaaggcccaagcatccaacaggctgaaatgggagctgcgatggatgcg
cttgaaaaatataacttcccacaaatggctcatcagaagcgcttcatcgagcggaagtac
cgccaagagctgaaggagatgcggcgagagcgcgagcggcaggagaaggagacggacgac
ggcggggcggcggcggcggcggaagccaggaagtga
DBGET
integrated database retrieval system
