Gambusia affinis (western mosquitofish): 122824510
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Entry
122824510 CDS
T07758
Symbol
trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gaf03016
]
122824510 (trdmt1)
Enzymes [BR:
gaf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
122824510 (trdmt1)
Transfer RNA biogenesis [BR:
gaf03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
122824510 (trdmt1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
122824510
NCBI-ProteinID:
XP_043961181
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Position
LG21:complement(23190900..23218980)
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AA seq
432 aa
AA seq
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MESLRVLELYSGIGGMHYALKESGISAQVVAAVDINTTANKIYRHNFPDTPVWNKTIEGI
PLDDFNKLSFDMIMMSPPCQPFTRLGLQGDVADPRCKSFLFILDLLPRLCKLPTYILLEN
VKGFESSSARDYLTKTLSGCGYTYQEIMISPTNVGVPNSRLRYFLVAKMSAENSSIQTSA
KGEAGGVTQWSSVSSPSEMMSSNYHTNGCSFSHVMDSEFPERSSVLRSKCQNTDRPSEDN
PNVHVLYKRETQMDSQKKTDQNKNLSVQQIQDYLEPQMNIDMGLYLLKPKTLLRYGSILD
IVQPHSRRSVCFTKGYGRYVEGTGSVLQCCMENEISSVFTNLDQLTEEEKLQKMLKLSLR
YFTPREVANLMGFPQSFSFPEDISIIQQYRVLGNSLNVVVVSRLLQLMTSEHFGHSEGEE
QFSVLENEYLCS
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtctgcgggtgctggagctttacagtggaatcggtggcatgcactacgcgtta
aaggaaagtggaatatctgctcaggtggtggctgctgttgacatcaacaccacagccaat
aaaatctacaggcacaattttccagacacccccgtctggaacaagaccattgagggtata
ccacttgatgacttcaataaattatcttttgatatgataatgatgagccctccttgccag
ccgtttaccaggttaggacttcagggtgatgttgcagaccccagatgtaagagcttcctc
ttcatccttgatcttcttccaaggctttgcaagctgccaacatatatcctgctggaaaat
gtcaaaggttttgagagctcctcagccagggactatttgacaaaaaccctgagtggctgt
ggctacacttaccaggaaatcatgatctccccgacaaatgtgggggttccaaattcacga
ctgcgttatttcctggttgctaaaatgtctgcagaaaattcgagcatccagacaagtgcc
aagggagaagctggaggtgtcactcaatggtcctcagtttcttctccaagtgagatgatg
tcatcaaactaccataccaatggttgttccttttcccatgtgatggacagtgagtttcct
gaacggtcctctgtcttgagatctaaatgtcagaatactgaccggccatcggaagacaac
cccaatgttcatgtcttgtataaacgcgagactcaaatggattcccaaaagaagactgat
cagaacaaaaacctatctgttcaacaaatacaagactacttggaacctcagatgaatata
gacatgggactttatctccttaaacctaaaaccttgttgcggtatggctcaattttggat
attgttcagccccacagccggaggtctgtctgcttcactaaaggttatggaaggtatgtg
gaaggaactggatcagttctacagtgctgcatggaaaatgagattagtagtgtgtttacc
aatctggaccagttgactgaagaggagaagctccagaaaatgttaaaattaagtctacgt
tattttactccgagagaagtagccaacctgatgggcttccctcagagtttctcttttcca
gaggatatctcaatcatccagcagtacagagttttgggaaacagtctcaatgttgtggtt
gtgtccagacttctacagctgatgacatctgagcattttggacattctgaaggagaagag
cagttctctgtcttggaaaatgagtatctgtgctcttaa
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