Gambusia affinis (western mosquitofish): 122824588
Help
Entry
122824588 CDS
T07758
Symbol
gars1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122824588 (gars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gaf01007
]
122824588 (gars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gaf03016
]
122824588 (gars1)
03029 Mitochondrial biogenesis [BR:
gaf03029
]
122824588 (gars1)
Enzymes [BR:
gaf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
122824588 (gars1)
Amino acid related enzymes [BR:
gaf01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
122824588 (gars1)
Transfer RNA biogenesis [BR:
gaf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122824588 (gars1)
Mitochondrial biogenesis [BR:
gaf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
122824588 (gars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
OS-D
DUF5915
Motif
Other DBs
NCBI-GeneID:
122824588
NCBI-ProteinID:
XP_043961343
LinkDB
All DBs
Position
LG21:10268809..10275064
Genome browser
AA seq
751 aa
AA seq
DB search
MLLLRSAASALLRTTTEIPSLCPLFTIRFVQLSLRHPPGRRSFSASVCLCGKKQRSLWLQ
LTEGQTMGDGNFEEILSPLRQAVKEQGDLVRKMKQEGAPDVDVTKAVAELKARKRTLEAK
ELSLQPKDDIVDRTKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNILQVWRQH
FIQEEQILEIDCTMLTPEPVLKTSGHVEKFADYMVKDVKNGECFRADHLLKAHLQKLMSD
KKCAAEKKAEMDSVITQLDNYSQQELTDLFVKYNVKSPTTGNELTAPISFNLMFQTSIGP
GGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTM
AEIEHFVDPNEKVHPKFSSVADLDLMLYSSKAQTSGQSAHIMRLGDAVEQGVINNSVLGY
FIGRIYLYLTKVGIAKDKLRFRQHMDNEMAHYACDCWDAETKTSYGWIEIVGCADRSCYD
LKCHARATKVPLVAEKPLKEPKTVNVVQFEPNKGAIGKAYKKDAKLAMEYLAVCDECFIA
EQEQLLNDNGEFTIETEGKTFKLTKEMVGVKRFQKTLHVEEVVPSVIEPSFGIGRIMYTI
FEHTFHIREGDEQRTYFSFPATVAPYKCSVLPLSQNQEFMPFVKELSEAMTKNGVSHKVD
DSSGSIGRRYARTDEIGVAFGITIDFDTVNKTPHTATLRDRDSMRQIRAEVNKLPVIVRD
LANGTLTWAEVESEYPIFEGQETSKKDTIEE
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttctccgcagcgctgcatcagctctgctgaggaccaccactgagattccctcc
ctctgtccactattcacgatccgctttgtccagttgtcgctccgccatccacccggaaga
aggtctttttcagcgtcggtctgcctgtgtggtaagaagcagaggagcctctggctgcag
ctcacggaaggacaaaccatgggggacggcaactttgaggagattctctcccctttgagg
caggcagtcaaagaacagggggacctggtacgcaaaatgaaacaggaaggagctcctgat
gtggatgtgaccaaagccgtcgcagaattgaaagcaaggaagaggactttagaggccaag
gagctgtcgctgcaacccaaagatgatattgttgacagaaccaagatggaggacaccctg
aagaggcggttcttctatgatcaggcctttgccatctatggaggtgtgagcggcctgtat
gactttggccctgttggctgtgccctgaagaacaacatcctgcaggtgtggaggcagcac
ttcatccaggaggagcagatcctggagatcgattgcaccatgctgactcctgagcctgtc
ctcaagacatctggacatgtggaaaagtttgcagactatatggtgaaagatgtcaaaaat
ggcgaatgcttcagggctgaccaccttctgaaagctcatctccagaagctcatgtctgat
aagaaatgtgcagctgagaaaaaggcagagatggacagtgtcatcactcagttggacaac
tactcccagcaagagctgacggacctttttgtgaaatacaacgtcaagtctcccaccaca
ggaaatgagctcaccgctcccatctccttcaatctgatgtttcagacatccatcggacca
ggagggaatatgccaggctatttgaggcctgaaactgctcagggaatcttcctcaacttt
aagcggctcctagagttcaaccaggggaaacttccctttgccgctgctcagatcggaaac
tccttcaggaacgaaatctctcctcgctctggactcattcgggttagggagttcaccatg
gctgagatcgagcactttgtggacccaaatgagaaggtccatcctaaattctccagtgtg
gcagacctggacctcatgttgtactcatccaaagcccagacaagtggccagtcagcccat
atcatgaggctgggagacgctgtggaacaaggagtgattaataactctgtcctgggatat
ttcattgggaggatttacctctaccttacaaaagtcggtattgccaaagataagctgcgt
ttccgacagcacatggacaacgagatggctcactacgcctgtgactgctgggatgctgaa
accaagacctcctatggttggattgagatcgtgggctgtgctgaccggtcttgttacgat
cttaagtgtcatgcaagagccacaaaggtcccgctagttgccgagaaacctctgaaagag
cctaaaaccgttaatgttgtccagtttgagcccaacaaaggagcaattgggaaggcttat
aaaaaggatgctaagttagcaatggaatatctggcggtgtgtgacgaatgcttcattgca
gagcaggaacagctgctgaatgataatggagagttcacaatcgagactgaagggaagacc
tttaaactcacaaaggaaatggtcggagtaaagagattccaaaagaccttgcatgtggag
gaagttgttcccagtgtcattgagccctcctttggaatcggtagaatcatgtacaccatc
tttgaacacacattccacatcagagaaggcgatgagcagagaacgtactttagctttcct
gcgactgtagctccatacaaatgttctgtcttacctctgagccaaaaccaagagttcatg
cctttcgtgaaggagctatccgaggccatgaccaaaaacggcgtgtcacacaaggtggac
gactcctccggctccatcgggaggcgctatgctaggacagacgagatcggtgtggcattc
ggcatcaccattgacttcgacacggtgaacaagacgcctcacacggccacgctgagggac
cgtgattcaatgaggcagatcagagctgaggttaacaagctgccagttattgttcgtgat
ttggccaacggcaccctgacctgggcagaagtggaaagcgagtatcccatctttgaagga
caggagacgagtaaaaaggacacgattgaggagtag
DBGET
integrated database retrieval system
