Gambusia affinis (western mosquitofish): 122824628
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Entry
122824628 CDS
T07758
Symbol
spata13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
122824628 (spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122824628 (spata13)
Membrane trafficking [BR:
gaf04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
122824628 (spata13)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
PRRSV_Env
Motif
Other DBs
NCBI-GeneID:
122824628
NCBI-ProteinID:
XP_043961416
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All DBs
Position
LG21:10881406..10904897
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AA seq
1255 aa
AA seq
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MSRAEQKDKALSRSEDPLQCLHCPNPDPLIRSRPLSDVYPSQVVADRNSVPYLLSGCGAQ
VQPVGAAPISDESRINGINHSAWSNPVIGQAEGRPHNSRIMRLFSNSRKGVIPPSSPAAD
CPNNDSNGSPQPWTGFSGLGVMDSFKKLRSSVLQGIQSKGAATGNLGQNAPLADVEMPNG
SAGSSSEREPTDAAHHLTTAEGNLVSNGSLADQKSATVEQYGSDIEDYDDEEAESGLTRN
SRFSRSMRKAYGAGRISLLDTNNGRSVGSDKNDTTSSTQISNHTSQVDIQTETQKENINV
NVLSRLSKSAENLHIFRRKSHCPGPPSPQEDHQKITLSNGTPSIQRTASTSSVDLRGRRS
PMKNKGPMVKLIGSMTDLTSRRKQSPSPSPTTPSPISPLCRLHDDYSRRLPCLQSSERQR
RPVAVTAQVSSVRCTPLIHAQPEDNTELQLHQVVSNPLSSGPRDSPEQISADISAQHELL
PASTTSNTKQMVECVSPPLSKREASQQQPDFASIPNEVKSHLQEQESIPRTEKVSNSPVS
PTPPTDGAAASTETASVKPRQRSGRPRPRPISDYAQLVSRKHCIPEEVAETNYEERTSDA
QLQENCSSNGNGSNPDNCSLNGEVQRHRPVSVIGAVDLFATDTELKKDRLPSPLSRPPIP
SHKVPPYRGVSARFRPCALSQSTPIGLDRVGRRRLHRVLSAGVSECSATLDDSVSEEEEE
ESSFEELADGTPYLQPGVELSVLNEWIISGHAVYAEALWDHVTMEEQELAFKAGDVIRLL
DASHKDWWWGRGGDREAWFPSSFVRVRVNQEDSSTESVESVADQEDPAPRDKPNTQHREQ
MRTNVVQEIMNTERIYIKHLKDICEGYIRQCRKNSSMFTELQLKTIFSNIEDIYRFQRQF
VRELEKKYNKEEPHLSEIGSCFLMQGEGFSIYSEYCNTHPAACAELQRLMKMGKYKHFFE
ACRLLQQMIDISIAGFLLTPVQKICKYPLQLGELLKYTPKDHRDHTGVSQAYEAMKKVAS
LINERKRRLESIDTIAHWQVAILHWEGPDVLERSSELIHSGELTRAVRQGKPQQRSFFLF
DHQLVYCKKDVLRRDLLHYRGRLDMDEIEVVDVADGRDPDLGLTLKNALRLRNASTLEFM
CMLCCRKVEDKQRWLEAFAKERQRVKEDEEMGIDISDEQRKQAIANARRPKHGKIKTVGY
ADSVPPHQNLPPLQQRHITIPTSVPQQQVFSLAEPPRRKPYHLLYSITRSAFFRK
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgagcagggcagaacagaaggacaaggccttgtcccgaagtgaagaccctctccagtgt
ctgcactgcccaaaccctgatcccctgatacggagcagacctctgagtgacgtttatcca
tcgcaggtcgtcgctgacaggaactctgtcccctacctgctgtctgggtgtggtgcccag
gtacagccggtgggtgctgctccgatctctgacgagagcaggataaatggaataaatcac
tctgcctggtccaaccctgtgataggtcaagctgaaggcagacctcataactcccgaatt
atgaggctgttctcaaactccaggaagggtgtcatccctcctagcagtcctgctgccgac
tgtccaaacaatgacagcaacggcagcccccagccgtggaccgggttttcagggctgggt
gtgatggactccttcaaaaagctacgatcgtctgtactgcaaggaattcagagtaaaggg
gcagcaacaggcaacctcggacagaatgcaccattagcagatgtggaaatgccaaatgga
tcagccgggagcagctcagaacgtgagccaactgacgctgctcatcatttaacgactgca
gaaggaaatcttgtatcaaatggaagtttagctgaccaaaaatcagcaacggttgagcag
tacggctcggatattgaggactatgatgatgaggaagctgaaagtggtctcacacgcaat
tccaggttttccagaagcatgaggaaagcatacggggcaggaagaatctcgttacttgat
acaaacaatggaagaagtgtaggaagtgacaaaaatgacactacaagcagcacacaaata
tcaaatcacacatcacaggtggacatccagacagagacccagaaggaaaacattaatgtg
aatgttctgagcagactcagtaaaagtgcagagaacctgcatatatttagacgtaaaagc
cattgtccaggtcctccatccccacaggaagaccatcagaagatcacattgtccaatggg
accccaagcattcaaaggactgccagcacttcctcagtggacctccgaggaaggaggagc
ccaatgaagaacaaggggccaatggtcaagctaatcggtagcatgactgacctaaccagc
cgacgaaagcaaagtccgtccccaagtcccacgactccatctcccatatcccccttgtgc
cgtctccacgacgactactctcgccgtttgccttgcctgcagagcagcgagcggcagcgc
cggcccgtagccgtcactgctcaggtcagctctgtcagatgcactccgctcattcacgcc
cagcctgaagacaacacagagctgcagttgcatcaggttgtctccaacccactttcctca
gggcccagagattcaccagagcagatttcagctgatatctctgctcagcatgagctgctg
cctgcttcaactaccagtaatactaaacagatggtcgaatgtgtttcacccccactcagc
aagagagaggcatcgcaacaacaacctgactttgcctcgataccaaatgaggtgaaatcc
catcttcaagaacaagagtcaattccccgaacagaaaaagtctccaactcacccgtgtca
cccacacctcccacagacggagctgcagcttccacagaaaccgcctctgtcaagcccaga
cagaggagcgggcggcccagacctcggccaatctccgactacgcccagctcgtttccagg
aagcactgcatccccgaggaagtagcggagacaaactacgaggaaaggacatcagatgcg
cagctgcaggaaaactgcagctccaatgggaacggcagcaaccctgacaactgtagcctt
aacggggaggttcagaggcatcggcccgtctcggtgatcggggccgtggatctgttcgct
acagatactgagctcaagaaggatcgccttccttctcctttgtcgcgaccaccaatcccc
tcccacaaggtgcccccctacagaggagtgtctgccaggttccgaccctgcgctctctcc
cagagcaccccgatcggactggaccgcgtggggcggcgcagactccaccgagtgctcagc
gctggtgtgtctgagtgttcggcgacgctggatgacagcgtgagcgaggaggaggaggag
gagagcagcttcgaggagcttgctgatggaacgccctacctccagcccggggtggagctc
tccgtgctcaacgagtggataatctcgggccatgccgtgtacgccgaggctctctgggac
catgtgaccatggaggagcaggagctggccttcaaggccggcgacgtgatccgcctcctg
gacgcttcccacaaggactggtggtggggcagaggaggcgacagggaggcctggttcccg
tccagctttgtgagggtccgtgtgaaccaggaggactcgagcactgagagtgtggagagt
gtggcggaccaggaagatccagcccccagggataaacccaacactcagcacagggagcag
atgagaaccaacgtggttcaggaaatcatgaacactgaacgcatctacatcaaacactta
aaagacatctgtgagggttacattcgtcagtgccggaaaaactccagcatgttcacagag
ctgcagctgaagacaattttcagcaacatagaagacatctacagattccagaggcagttc
gtcagagaactggagaagaagtacaataaggaagaaccgcatcttagtgaaatcggctcc
tgcttcctcatgcagggcgagggattttcgatctactctgagtactgtaacactcatcct
gctgcctgcgctgagctgcaacgtctcatgaagatgggcaaatataaacatttcttcgag
gcgtgccgcctcctccagcagatgatcgacatctccatcgctggtttcttgctcacacct
gtccagaagatctgtaaatacccactgcagctgggggagctgctcaagtacacacccaaa
gaccacagggaccacactggtgtcagccaagcatacgaggctatgaagaaggtggccagt
ttaatcaatgagaggaagcggcggctggagagcatcgacaccatcgctcactggcaggtt
gccattctgcactgggagggccctgatgtgctggagcgcagctcggagctgatccactcc
ggcgagctgacccgcgccgtccggcagggtaagccgcagcagcgcagcttcttcctgttc
gaccaccagcttgtctactgcaaaaaggacgtcctgcgtagagacctgctgcactaccga
ggacgtctggacatggacgagatcgaagtggtggacgtcgccgatgggcgggacccagac
ctgggcctgaccctgaaaaacgccctgcggctgcggaacgcctccaccctggagttcatg
tgcatgctgtgctgcaggaaggtggaggacaagcagaggtggctggaggcttttgccaag
gagagacagagggtgaaggaggatgaggagatgggaatagacatcagcgatgaacaaaga
aaacaggccattgctaatgccagaagaccaaaacatgggaagatcaaaaccgttggctat
gccgactccgtcccgccacaccaaaacttgcccccccttcagcagcgccacatcacgatt
cccaccagcgtgcctcagcagcaggtgttttctctggccgagccccccagacgaaagcct
taccacctgctgtacagcatcactcgcagcgccttcttcaggaaatga
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