Gambusia affinis (western mosquitofish): 122824669
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Entry
122824669 CDS
T07758
Name
(RefSeq) aggrecan core protein-like isoform X1
KO
K06792
aggrecan 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gaf00535
]
122824669
00536 Glycosaminoglycan binding proteins [BR:
gaf00536
]
122824669
04091 Lectins [BR:
gaf04091
]
122824669
Proteoglycans [BR:
gaf00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
122824669
Glycosaminoglycan binding proteins [BR:
gaf00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
122824669
Lectins [BR:
gaf04091
]
C-Type lectins
Lecticans
122824669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
EGF
V-set
hEGF
EGF_3
Motif
Other DBs
NCBI-GeneID:
122824669
NCBI-ProteinID:
XP_043961467
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All DBs
Position
LG02:complement(2368459..2385524)
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AA seq
1496 aa
AA seq
DB search
MLKWTVLLSLCLSISSATFNYLYEQRSFMDPEDILTVSIPLEGLQRPLLGETLLLQCYFQ
DHSVEDSGFPPDTPLSHRIKWSYVTKEKTTTILVALEGRVRISESYLDRVQLQSYPQTPT
DASIKISELRSSDTGAYRCEVQIGIEDAYDIVHVLVQGIVFHYRPFMGRYTLTFEKAKAA
CAQNSAVIASPEQLQAAFEDGFHQCDAGWLSDQTVRYPIHETRMNCYGDKEELPGVRTYG
MRDLNETYDVYCFADRMPGRVFHSTSAVKFTFSEAALACSYQGARLATTGQLYLAWQGGM
DICNAGWLRDGSVRYPINIRRPQCGGGLLGVRTVYLHTNQTGYPLPDSRYDAFCYTDSPD
DEGSGTDEGSGVGIVTTVTKSPEVFFSKTTTESEAVGEVETQQPFDLSLTSSENPNKLPP
PQPTNFTDFTFDLIEAVTNQPAVQREPSKTSVISPAGVVFHYRSPTGRYALTFVEAQLAC
QGVRGAMATPQQLQRAYEDGYHQCDAGWLLDQTVRYPNVFPREKCAGDLGDQPGVRTYGL
RPAEERYDVYCYTEKIKGEVFHVGSAEGFTYDEAASACENHNAVLASTGELYAAWKLGLD
KCRAGWLLDRSVRYPVNSPRPGCGGEKSGVHNLYSPPNQTHYPEVDSRFDAYCIRVGFLS
ESNGTELNITDIQKALPNQTSDTDDGFFIVPPIPVEISSSGSGSADFDSASAGDNSGVQF
NSGDQITSGDQSGSGDRSGSGDQSGSGDRSGSGDQSGSGDQITSGDQSGSGDQVNSVEQS
GSGDRSGSGDQSGSGDQVNSVEQSGSGDRSGSGDQVNSGDISGSGGKITFGDQDWYTETA
GTSGGSSLASGSGSGSGPRVVFSGLCIAAVEGSTSGEPQEAGEGRTDVLIFPLSAADSGE
LSGSGDMSGSGSGFDFIEKDAGHLTGTGLILDQELSGFISFLSGSSSGSGRSGDISGNGD
APILIIDDKLIDAKKENNLDGGPLDFSGSGNFYGSGVLSGSSSGSDSEFLNGVTFMGSGF
TKLIGSPSGEHEEATGGLFYSSGSERGVQISGFKISSFSFDSRAGVSGSGFSKSETSTTK
GEEEGSAIFFTQGLMTEIPGDDKLPLELGENSVLYSGEASGNNGFYSGDGNKNSSEDNTF
MSGVSSSGDSSDPLVVVLPAPSVDPALTEPIIRTEGDIHGPELTHNSRVHVSPGPAVAPA
GLAAPPAEVKPAFEQTAGVLEASNPCEPNPCGKASCTVEEEVAFCFEAEVCHPNPCANGA
TCVESADSFKCLCLPSYGGERCEIEEQRCEDGWTKFQGNCYLHVSDRAEWLEAEQRCRHL
NAHLVSIITPEEQQFVSAHAQENQWIGLNDKTVQKDFQWTDGSPLQYENWKLNQPDNYLN
PAEDCVVLIWHENGKWSDVSCSDHLPFTCKKGPVFCGAPPLVKNTRMFGNRRSEYPVNSI
IRYQCNPGFRQRHLPVVRCQADGNWEKPKVECTDVKARNRIKLRSSRNSPVSGKNK
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagtggaccgtgctcctgtctttatgtttaagtatctcctctgcaacatttaac
tatctttatgagcagagatccttcatggatccagaggacattctgactgtgagcattcct
ctggagggcttacagcgccccctgctgggagaaactctgctactgcagtgctactttcag
gaccactctgttgaagattctggttttccccccgacactcccctttcccaccgtatcaaa
tggagctacgttacaaaggaaaagacgactaccatccttgtggctttggagggacgggtc
cgcatcagcgaaagttatctggacagagttcagctgcagagctacccccagactccaaca
gatgccagcatcaaaatatcggagctacgttccagtgacacaggagcgtatcgctgtgaa
gttcagattggcattgaggatgcctatgacattgtgcatgtccttgttcaaggtattgtg
ttccactaccggccctttatgggtcgctacactttgacttttgagaaagcgaaggcagca
tgtgcccagaacagtgcagtcattgcttctccagagcagcttcaagcagcattcgaagat
ggtttccaccagtgcgacgctggctggttgtctgaccaaacagtgcggtacccaatccac
gagactcgcatgaactgctatggtgacaaagaggaactcccgggggtcaggacgtatggc
atgagagatctcaatgagacgtatgatgtttactgctttgcagataggatgccaggcaga
gtttttcacagcacctctgcagtgaagttcaccttctctgaggctgcgctggcgtgttcc
taccaaggagctcggctagccaccacaggtcagctgtaccttgcatggcaggggggtatg
gacatctgcaatgccggctggctgagagatgggagtgtccgctaccccatcaatattcga
cggccacaatgtggagggggtctgctgggggtgcgaacagtttatctccacacaaaccaa
actggatacccacttcctgattcacgctatgatgccttctgttacacagattcccctgat
gatgagggttcaggcacagatgagggcagtggtgttgggattgttaccacagtgacgaag
agtccagaggtgttcttcagcaagacgaccacagagagcgaagcagttggagaggtggag
acccagcagccatttgatctgagcctcaccagcagcgagaaccccaacaagctgccacct
cctcagccaacaaacttcacagatttcacctttgaccttattgaggcagtcaccaaccag
ccggctgtacaaagggagcccagcaaaacctctgtcatctctccagcaggtgtggtcttc
cattaccgctcacccactggccgttatgctctcacattcgttgaggctcagttggcctgc
cagggtgtcagaggcgccatggccacaccacagcagctgcagcgagcatacgaggatgga
tatcatcaatgtgatgcaggttggcttctggaccagactgtgaggtatcctaacgtgttt
cctcgagaaaaatgtgctggagatcttggagatcaacctggagttcggacgtatggcctc
agaccagcagaggagagatacgatgtttactgctacaccgagaagatcaaaggagaggtt
tttcatgtgggatctgctgagggtttcacctacgacgaggctgcttctgcctgtgaaaac
cacaatgcggttctggcctccactggagagctctatgcagcctggaaactgggcttggac
aagtgccgagcaggctggctactggaccgcagcgttcgctaccccgtcaacagcccccgt
cctgggtgtggaggagagaaatcaggggtgcacaatttgtactctcctccaaaccaaaca
cactaccctgaagttgattccagatttgatgcatactgtataagagttggctttctgtct
gaatcaaatggaactgaactgaacatcacagacatccagaaggctctacccaaccagaca
tcagatactgatgacggcttcttcatcgttcctcccattccagtggagatttcaagttct
ggctctggttcagcggactttgattcagcctctgcgggagataattctggagtacaattc
aactctggagaccagattacctctggggatcagtctggttctggagaccggtctggttct
ggagatcagtctggttctggagaccggtctggttctggagatcagtctggttctggagac
cagattacctctggggatcagtctggttctggagaccaggttaactctgtagaacagtct
ggttctggagatcggtctggttctggagatcagtctggttctggagaccaggttaactct
gtagaacagtctggttctggagatcggtctggttctggagaccaggttaactctggagat
atatctggttctggaggcaaaatcacctttggagaccaagattggtatacagagactgca
gggaccagtggaggatccagtttggccagtggatctggttcaggatctggacccagggtt
gttttctctggactctgcattgcagcagtagagggctcaacgtcaggagaacctcaagag
gctggagaaggaagaacagacgttcttatattccctttgtctgccgctgattctggggaa
ctcagtgggagtggagatatgtccgggtctggatctggatttgacttcattgaaaaagat
gctggacatctcactggtacgggtcttatcttggaccaggagttgtcaggttttattagt
tttctatctggatcttcatctggaagtggacgatctggagacatttctggaaatggagat
gctccgatcttaataatagatgacaaactaattgatgcaaagaaggagaacaaccttgat
ggaggtccgttagatttcagtggttctggaaacttttatggatctggggttctcagtggg
tcttcctctggaagtgactccgagtttcttaatggtgtgacttttatgggttcaggcttc
actaaacttattgggtcaccttctggagaacacgaggaggctactgggggtttgttctac
agctctggatcggaacgtggggtgcagatatctggatttaaaatctcaagcttcagtttt
gattcaagagctggagtttctggatctggtttctctaaatctgaaacatcaacaaccaaa
ggcgaggaagagggcagtgccatatttttcactcagggtctaatgacagaaatacctgga
gatgataagttgcctctggagctgggagaaaactcagtgctctacagtggagaagcaagt
ggcaacaatggtttctactccggtgacggaaacaagaattcatctgaggataacaccttc
atgtcaggggtttcttcttctggagattcttctgatccactggtggtggtcctacccgct
ccatcagttgacccagcactaacagaacccatcataagaacagagggagatatccatgga
cctgaactgacacacaactccagagttcatgtttctccaggtccagcagttgcccctgca
ggattagcagctcctcctgctgaagtcaaaccagcttttgaacaaacagcaggtgtccta
gaagcttccaacccatgtgaaccaaatccttgtggcaaagcttcatgtacagtagaggaa
gaagttgctttctgctttgaggcagaagtgtgccatcccaacccttgtgccaacggagcc
acctgtgtggagagtgcagactctttcaaatgcttatgcctgcccagctacggaggggaa
cgctgtgagatcgaggagcagcgatgtgaagacggctggacgaagtttcagggaaactgc
tacctgcacgtctctgacagggcggagtggctggaggcggagcaacgctgtcgacacctg
aacgctcacctggtcagcatcatcacaccagaggagcagcagtttgtcagcgctcatgcg
caggagaaccagtggatcggcctgaacgacaaaacggtgcagaaggatttccagtggacg
gacggctctccactgcaatatgagaactggaagctgaaccagccagacaattacctcaac
ccagctgaggactgcgtggttttgatctggcatgagaacggaaagtggagcgacgtttcc
tgcagcgaccacctgccgttcacctgcaagaagggaccagtgttttgcggcgctccgcct
ctggtgaaaaacacacgcatgtttggaaaccggaggtcggagtatccggtcaactccatc
atccgttatcagtgcaacccaggatttagacagcgccatctacctgtggtccgctgccaa
gctgacgggaactgggagaaacccaaagtggagtgcacagatgtaaaagccaggaacaga
ataaaactcaggagcagcagaaattcaccagtgagcggaaaaaacaaataa
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integrated database retrieval system
