Gambusia affinis (western mosquitofish): 122824828
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Entry
122824828 CDS
T07758
Symbol
rev3l
Name
(RefSeq) DNA polymerase zeta catalytic subunit
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
122824828 (rev3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122824828 (rev3l)
Enzymes [BR:
gaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
122824828 (rev3l)
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
122824828 (rev3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
POL3_N
REV3_N
DNA_pol_B_exo1
zf-C4pol
Motif
Other DBs
NCBI-GeneID:
122824828
NCBI-ProteinID:
XP_043961580
LinkDB
All DBs
Position
LG22:complement(21385870..21441210)
Genome browser
AA seq
3007 aa
AA seq
DB search
MFAVRIVTADYYLASPIKGLDVCYSEFRESEVKKVPVVRIFGATPAGQKTCLHLHGVFPY
IYVPYDGCRQQPERYMRQVAFSIDRALNVAMGNPAASTQHVFKVVLVSGMPFYGYHAKEK
HFMKIYLYNPQILKRVCELLQSGAVMNKSYQPHEGHIPYLLQLFMDYNLYGMNLINMAAV
KFRRSQKKVGPADPNQPSSSSHSSISPWKIPCSTKLNDSSLAGTFVRWEDNALPSSLVLD
DVERQSTCELEVDAVAVDILNRLDIENQIGRNPGLQAIWEDEKQRRRENNQTSQIEAPDS
QDRGSVTSTESEKTFMNRLKEILRENKFDVTQDLFVDDEQESLSADLTLHPDLLTPDGVP
CTAANAVETHRDSQPDSVRSGGKVPEEAVIDEEAILSLLENSQTFLPLSQTSNNSTILES
SQDHALIDLLAGLEDDGFHRTPLIHSSQPQSLPGASTYNCNSDEEEVGPELEKEEAELSM
IMSQRWDSEHPERTNPPRPAVREAEDGFSDEQQESSDEDMEWSGTHSLFVNLSIPQLDGA
ADESSDSSLTDSGSMSQSSLTVTEKLLGKTNPCTGESVHLEPPSSAKILLCKHPEHRPVC
GLDTEEQLKNSFQLKSSPDGSSDCSAGFRVNKEITYILPVKHPIPRKIANHNEVPPICMD
KEDIRPLYTYNKKSSKPVEKADLEAFPFSSGKVSKNRKRYSSLETVETNRLSIFQNHSTI
SLCYSDLRACSAKTELELSTKERKSPILRSLTSTPSLMKEGEFIDHREEELAPESEEGDV
GELKIRYEDYQENKTERTIVAQQEAHYKFFPSVILSNCLNRKKTGNKKPADTCSKQELSP
TCKLKLKLPKKRLGMAGHRNKAAAAQSPISDSPVCTALCSETPACNQTPDTEGPVSEDQP
KPQVEVNEDEPNEEVEPAINEELDSEEKTVDEQIESVSETVVSNTITTSLLCEEAKDVTE
DRSSLDPDVSAKVNCTKSSALPGSKYTLRAKRKQNFDGTDEDQPGSSRSKNPRKFPRSQE
TKYQKRRKKEPPVIIKYIIINRFKGQKNMLVKMSKVNADEKLVMLTADKVEHYNKLAPLK
SFWPKVPESTAVRFPVKEPKAKKLPKRKARVNNTGKKTINISPKKPLVRRGQRVKRSTGC
QRRPLLPSLPPPRPCYCELADDFEKDYTDVMVELGYLSDRSPSPTESTPPRCWSPSDPFL
NSTEQLINPLSDPCLSSASLNPCTKSVTKRGQRRSRTAKPKKSTESKRKVNMSAAKPSQV
QEPKQEKSRRGVAAAARQRKKASNAAESPAISPQPRRSRKKKTDKPKSDDLCKEDSQLLF
SDGGLAPSESSSLDITSFQQPLGTNITCQSRSSASDTSMPNSARFIEPKAEDCETSIMQV
NQNILAPVEMKQQGCQTTMVKVEFCPEYCTAPQPPAETINDVQKDKGCRPSAPKNGETPA
LTETPSGLAVLKQLLQKRQQGQALPLQVVGTDRHAAAIAQAAVLLNPSAKHTKPIKTPST
APRKPRVPKSTAPKEKKPRNRKSRTSSTQPGQSVKQDGSMSDDCPLFSSAPSLSSCNFIE
DSLSPELPQDYTFDINTIHQAEFSSPYSGNQFVLTDKNLPVKFLSDICHEPPSAQVQGLE
GLSQSQTERDSDVCRVRPASPELFDRSGNGEPSTNLALLQSEKHRPERQRDWDFSFYKSH
TLSPFQDFHCERKEFLFSAFDPVIPLSLSSVSFVDQEGSPTSELHESIDGLTSTTPSSSP
HSISSLSHVRASQLQRGTGGGAHVLKPLMSPPSRDEILGSLMDLEMSEATFQEPFCSDPS
DIPNKPMEVGGRKLTVGTRLVRELQEFGGDLSLEGLHFWKTAFSVMTHPATTIASSQGVE
VEQTKEEKTGRLASSASDKKVVLLPCRSPPSHERVQLWLEARKQFDSLQKERREPGKEQE
GADVEQENPDRTKLPDVPRCISVNVEHCENTSSVRTRRRKKLSLSLALSPLVDTGPRSNS
TTLSPVSDESTVSPQPDKQEDASNTMSPESPELPPWQESHQLSPSAPERLDSKNSPEPPS
PRLPDSQERFGADQSPSPFYAADGNGGSSNPHRLHTTPFLRKRRRSTEDLDPVCSTPISD
KDPVSQRRRSQADPLRRVLLTTQMKNQFAAINVPKKEQSQIEGPSIANSYGFKVSMQNLQ
DAKALHEVQYLTLMGMELHARSRRDLEPDPEFDPICALFYCLSSDAPLQGRDGTQLTGAI
MVDKDHESCGQGSRSKAPLLVRSGVSGLQVTYAREEKMLFQELIAIMRRFDPDILLGYEV
QMHSWGYLLQRAAAIGVDLCQQLSRIPGDSKENRFAAERDEYGADTMTEINIIGRVTLNL
WRVMKSEVTLNNYSFENVAFHVLHQRFPLYSPRTLSDWFDHVTHLHRWKMVDHYVSRLHG
TMQLLQQQDIVGRTSELARLFGIQFLHVLTRGSQYRVESMMLRVAKPLNYIPVTPSVQQR
AQQRAPQCIPLVMEPESRFYSNSVVVLDFQSLYPSIVIAYNYCFSTCLGHVDSLGTPDEF
KFGCTSLRVPPELLHQLRNDITVSPSGIAFVKSSVRKGVLPRMLEEILSTRIMVKQSMKS
YRQDKALMRLLDARQLGLKLIANVTFGYTSANYSGRMPSVEVGDSIVHKARETLERAIKL
VNDTKKWGARVVYGDTDSMFVLLKGATKEQAFKIGHEIAEAVTATNPKPVKLKFEKVYLP
CVLQTKKRYVGYMYESLDQKEPVFDAKGIETVRRDGCPAVSKILERSIKLLFETRDISQV
KQFVQRQCVKVLDGRASMQDLTFAKEYRGSGSYRPGACVPALELTRRMMAYDRRLEPRVG
ERVPYVIVYGMPGVPLIQLVRRPMEVLLDPSLRLNATYYITKQILPPLGRLFQLIGVDVF
GWYQELPRIQKASCSTAVEGEEPSGRKGTISQYFTTLHCPVCDELTQLGVCARCRADPQR
VAVTLYQDMRQWESQQEQLLKICKNCSSCAERQVPCVSLDCPVLYKLSRVNRQLSKAPYL
RQLLEQF
NT seq
9024 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagtgcgcatagtcaccgcagactactatcttgcaagtcccattaaaggcctg
gacgtgtgttactctgaattcagggagagtgaggtgaagaaggtaccggtggtgcggata
tttggagcaacgccagcaggtcagaagacgtgtctccaccttcacggtgtgttcccatac
atctatgtgccatatgatggctgtagacagcagccggagcgctacatgcgacaagtggcc
ttcagcatcgacagggccctcaacgttgccatgggaaaccccgccgccagcacccagcat
gtcttcaaggtggtgctggtctccggcatgcctttctatggttatcatgccaaggagaag
cactttatgaagatctacttgtacaatcctcagatactgaaaagagtgtgtgagctatta
caaagtggagcagtgatgaataagagttaccagcctcatgagggccacatcccctacctg
ctgcagcttttcatggactacaatctgtatggcatgaacctgataaatatggcagcagtg
aagttccgcaggagccagaagaaagtgggccctgcagacccgaaccagccgtcctccagc
tctcactccagcatcagtccctggaagattccctgcagcaccaagctgaacgacagcagc
ctcgcaggcacctttgtccgctgggaagacaacgctctgccctcctcattagtcctggat
gacgttgagaggcagagcacctgtgagctggaggtggatgctgtggccgtggacatcctg
aaccgtcttgatattgaaaatcagatcggcaggaaccccggactgcaggccatttgggag
gatgagaaacagaggaggagggagaacaaccagacctcccagatagaagcgccggattca
caggatcggggctcggtcacttcaacagagagtgaaaaaaccttcatgaacagactgaag
gagattctgagggagaacaagtttgatgtgacccaagatttgtttgtggatgatgaacag
gagagtttgtcagctgacctcactctgcatcctgacctcctgacccctgacggggtgccg
tgtacagctgctaacgccgtggagacgcacagagactcccagccagattcagtgaggagc
ggtggaaaagtcccagaggaagctgtcattgatgaagaagccatcttaagtcttctggaa
aacagccagacatttctgccactctcacaaacatccaacaactccaccatattagaaagc
agccaggatcacgccctcattgatttgctggctggcctggaagacgacggtttccacagg
actccactaatacacagctctcagcctcaatcactccccggtgcatcaacctacaactgc
aacagtgatgaagaagaagtcggacccgagctggaaaaagaagaggcggagcttagtatg
ataatgtcacagcggtgggacagcgaacatcctgagagaacaaacccaccgaggcctgcg
gtcagggaggcagaggacggcttcagcgacgagcagcaggagtcctctgacgaagacatg
gagtggagtgggactcactctctgtttgttaatctgtccatcccacagctggacggggca
gcagacgaaagcagtgattcttctttaacagacagtggctccatgtctcagtcttcgctt
acagtcacagagaagctgttggggaaaacaaatccctgcactggagagagtgtccacctg
gagccgccatcgtcagctaagatcttgctgtgcaagcatcctgagcacaggccagtctgt
gggctggacacggaggaacaactcaaaaactcctttcaattgaaaagcagcccggacggc
tccagtgactgttcagcagggttcagggttaataaagaaatcacatacatcctgccagtg
aagcacccaattcctcgcaaaatagccaatcacaatgaggtgcctcctatctgcatggac
aaggaggacattcgaccgttgtacacgtataacaagaaaagctccaaacctgtggagaag
gctgatctggaagccttcccttttagcagtggaaaagtgtcaaaaaataggaaaaggtac
agcagccttgagactgtagaaactaaccgtttatccatctttcagaaccacagcaccatc
tccctttgttactcagacctcagagcctgctctgctaagacagagctggagctgagcact
aaggagagaaaaagcccaattctgaggagcctcacctcgacgccatccctcatgaaggag
ggcgagttcatcgaccacagagaagaagaactggccccggagagtgaggaaggagatgtt
ggggagctcaaaattagatatgaagactaccaggaaaataaaactgagaggactattgtg
gcccagcaggaggcacattacaagttcttccccagtgttattctctccaactgtctcaat
agaaagaagactggaaataaaaagccggctgacacctgcagcaagcaagagctatctccg
acttgcaagttgaagctgaaacttcctaaaaaaaggttaggaatggcaggacatagaaac
aaagcagcagcagctcagagcccgatctccgacagtccagtttgcactgccctctgttca
gaaacacctgcttgtaaccagactcctgacacagaggggccagtttcagaggatcaacca
aaaccacaggttgaggtaaatgaagacgagccaaatgaagaagttgagccagctataaat
gaagagttggacagtgaggaaaagacagtcgatgagcagatagaatcagtctcagagact
gttgtctccaacaccatcactacttcccttctttgtgaagaagccaaagatgtaacagag
gatcggtcgagcctcgatccagatgtgtctgcgaaagttaactgtactaaatcatctgca
ctgccggggagtaaatacacactgagggctaaacggaaacagaactttgatggtactgat
gaagaccagccaggttccagtcgttctaaaaaccccagaaagtttcccaggagccaggag
accaaataccagaaaagacgcaagaaagaacctcctgtaattatcaagtacatcataatc
aacaggttcaaaggtcagaaaaacatgttggtgaagatgtccaaagtgaatgcagatgaa
aagctggttatgttaactgcagataaagtggaacattacaataaactggctcctctcaag
agcttctggcctaaagtgccagagtccactgccgtcaggtttcccgtcaaagagcccaaa
gctaaaaaattgcccaagcgaaaagccagggtcaacaacacaggcaagaagaccatcaac
atctctcccaaaaagcctctcgtcagacgagggcaaagggtgaaaaggagcacaggctgt
cagagacgtccacttctgccctctctgcccccccctcggccgtgttactgtgagctagca
gatgactttgagaaagattacaccgatgtcatggtagaactgggctatctttctgataga
tccccaagcccaacagaatcaacgcccccgcgttgttggtccccaagtgacccttttcta
aacagtacagaacagctgataaatccactcagtgatccttgccttagctccgcatcacta
aatccatgcacaaagtctgtgactaaaagaggccaaaggagaagtcgaacagccaaacct
aagaagtccacagagtctaaaagaaaagtaaacatgtctgctgctaagccctcacaggta
caagaacccaaacaggagaaatcaaggagaggtgtcgctgctgctgcaaggcaaagaaag
aaagctagcaatgcagctgaaagtcccgcaatatctccacaacccagaaggtcccgcaaa
aagaaaaccgacaaacctaaaagtgatgatttatgcaaagaagactcccagcttcttttc
tctgatggcggattggctccatcagagagttcctctttagacatcacctcctttcagcaa
ccgctaggcaccaatatcacctgtcagagcaggtcctcggcttcagacacatcaatgccc
aactcagctcgctttattgaaccaaaggctgaggactgcgagacctcaattatgcaagtt
aaccaaaacatactggcacctgttgagatgaagcagcagggttgtcagaccactatggta
aaggtagaattttgtccagaatattgcactgcccctcagcctccagcagagacaattaat
gatgtccagaaagacaaaggttgtcgcccttcagctcctaaaaacggagagacaccagct
ctcactgagaccccgtctggcttggctgttcttaagcagctcctccagaagaggcagcag
ggacaggcccttcctctacaagtagttggaacagacagacatgccgctgccatagctcag
gccgcagtgctgctaaacccctccgctaaacacactaagcccattaaaactccttccact
gctcctcggaaaccccgggtcccaaagtctaccgctcctaaggagaagaaacccagaaac
aggaaaagcaggaccagtagtactcaaccaggccaatcagtgaagcaggacggcagtatg
tctgatgactgccctctcttctcctctgcaccgagcctctccagctgcaacttcatagag
gacagcttgtccccagagctcccacaggactacaccttcgatataaacactattcaccaa
gcagagttctccagtccctacagcggcaatcagtttgttttgactgataaaaacctacct
gtcaagttcctcagtgacatctgccatgaacctccatctgctcaggtgcagggcttggaa
ggtctttctcagagccagactgagagagactctgatgtgtgcagagtcaggcctgccagc
cctgaactctttgacaggtctgggaatggagagccctcaacaaacctggctctgcttcaa
tctgagaagcacagaccagaaagacaaagagactgggacttttctttctataaatcccat
accctcagcccttttcaagacttccactgtgagagaaaggagttcctcttctcagccttc
gacccggttatacctttgtctctaagctctgtgtcgttcgtggaccaggaaggctcaccg
actagcgaacttcatgagagcattgacggacttacatccaccacacccagcagctcccct
cactcaatcagttcactgtcacatgtgagagcaagccagcttcagcggggcaccggaggt
ggagcccatgtcctcaagcccctcatgtcccctccaagtcgggacgagatcctcggcagt
ctgatggacctggagatgtcagaagccacgttccaggagcccttctgcagcgatccctct
gacatcccaaacaagccaatggaggttgggggccgtaagctcaccgtgggaaccagatta
gtgagggaactccaagagtttggaggagacctgtctttggagggcctccatttctggaag
accgccttctccgtcatgacgcaccccgccaccaccatcgcctcctctcagggagtggag
gtcgagcagacaaaagaggaaaagacggggcgtctcgcctcctcagccagcgacaagaag
gtcgtccttctgccctgcaggagcccgccgagccacgagcgcgtgcagctgtggctggaa
gccaggaagcagttcgacagcctgcagaaagagaggagggagccggggaaggagcaggag
ggggcagatgtggagcaggagaaccctgacagaaccaagctgccagatgttcccagatgc
atttcagttaacgttgaacactgtgagaacacttccagtgtgagaactcgcaggagaaag
aagctcagcctgtccttagccttgtctcctctggtggacaccggccctcggtccaactcc
acaacgctgagtccggtttcagatgagagcaccgtgagcccccagcctgacaaacaggag
gacgcctccaacacgatgtctcctgaatccccagagctgcctccgtggcaggagtctcac
cagctgagcccatcggcgcctgagcgactcgacagcaagaactcaccagagccaccatca
cccaggctccccgattcacaggagagatttggagcggaccagtctccctctcctttctat
gctgcagacgggaacgggggcagcagcaatccacaccgcttacacaccacccccttctta
aggaaaaggcggaggagcacggaagatctggacccagtctgcagcacgcccataagtgac
aaggatcctgtttctcagagaagaagaagccaggccgatcctttgaggagagttttactg
accacacaaatgaagaaccagtttgctgctataaatgtgccaaagaaagaacagtctcag
attgaagggccaagtatcgccaactcgtacggcttcaaggtcagcatgcagaatctgcag
gacgccaaagctctgcatgaggtccagtaccttaccttgatgggaatggagctccatgct
agaagccgccgggacctggaacctgacccggagtttgacccaatatgtgccttattctac
tgcttaagctccgacgcgccactgcagggccgagacggcactcagctgacaggtgccatc
atggtggacaaagaccatgaaagctgtggtcaaggttccagatcgaaggcaccgctgctg
gtcaggtcaggagtctccgggctacaagttacctacgccagggaggagaagatgctgttt
caggagctcattgccatcatgaggaggtttgacccagacatcctgctgggatacgaggtg
cagatgcattcatggggctaccttcttcaacgcgccgctgcaataggagtggacctctgc
cagcagctgtcacggattccaggtgactccaaggagaaccgcttcgccgcagagagggac
gagtacggagccgacaccatgactgagatcaacatcatcggccgcgtcaccctcaacctg
tggagggtgatgaagagcgaggtgacgttgaacaactacagctttgagaacgtggccttc
cacgtgctccatcagcgcttccccctctacagcccccgcacgctgtccgactggtttgac
cacgtcacacacttgcacaggtggaaaatggtggatcattatgtgagtcgtttacacggc
accatgcagctgctgcagcagcaggacatcgttggcagaaccagcgagctggcccggctc
tttggaatccagttcctccatgttttgactcgaggatcccagtaccgtgttgagtccatg
atgctccgtgtggccaagcccctgaactacatcccggtgacgcccagcgtacagcagcga
gcccagcagagggcgccgcagtgcattcccttggtgatggagcccgagtcccgattctac
agcaactctgtggtggtgctggacttccagtcgttgtacccctccatcgtcatcgcatac
aactactgcttctccacatgcctcggccatgtggacagcctgggaacgccggatgaattt
aagtttggctgcacctccctgcgggttcctcctgagctcctccaccagctccgtaatgac
atcaccgtgtccccgagcggcatcgccttcgtaaagtcgtcggtgcgtaaaggtgtccta
cctcgcatgctggaggagatcctgagcaccaggatcatggtgaagcagtccatgaagagc
tacaggcaggacaaggccctgatgaggctgctggacgcccggcagcttggactcaagctc
attgccaacgtcacctttggctacacctcagcaaactactcaggacgcatgcccagtgtg
gaggtgggagacagcattgtccacaaagccagggagaccctggagagagccatcaagctg
gtcaacgacaccaagaagtggggagcccgagtcgtctatggagacacagacagcatgttt
gttctgctgaagggagccaccaaggagcaagccttcaagatcggccatgagatcgcagag
gccgtgaccgcgaccaaccccaaacctgtcaagctcaagtttgagaaagtgtatttgccc
tgcgtgctgcagacaaagaagcgctacgtgggctacatgtacgagagcctggaccaaaaa
gagccagtgtttgatgccaaagggatagaaactgtgcgtcgcgacggatgccccgctgtt
tccaagattctggagcgctccatcaagctgctgtttgagacacgggacatcagtcaggtg
aagcagtttgtccagcgtcagtgtgtcaaggttctggatggccgggctagcatgcaggac
ctgacctttgccaaggagtaccgaggcagcggttcgtaccggcccggagcctgcgtgcct
gccctggagctcaccaggcggatgatggcatacgaccggcgcctggagcctcgcgtgggc
gagagagtgccctatgtgattgtgtatgggatgcccggcgtgcccctcatccagctagtg
cgccggcccatggaggtgctgctggaccccagcctgcgcctcaacgccacctactacatc
accaagcagatcctgccgccgctgggccgcttgttccagctcatcggagtggacgtgttc
ggatggtaccaggagctccccagaatccagaaagcgtcctgttccactgcggtggagggc
gaggagccctctgggaggaagggaaccatttctcagtatttcaccacgctccactgccct
gtgtgtgacgagctgacccagctaggggtgtgcgcacggtgcagagccgacccccagcgg
gtggctgtgaccctgtaccaggacatgaggcagtgggagagccagcaggagcagctgctc
aagatctgcaagaactgcagcagctgtgctgagcgacaggttccctgtgtgtccctggac
tgtcccgtcctctacaagctgtcccgggtcaacaggcagctctccaaggccccatacctc
cgacagctgctggagcagttttga
DBGET
integrated database retrieval system
