KEGG   Gambusia affinis (western mosquitofish): 122824839
Entry
122824839         CDS       T07758                                 
Name
(RefSeq) histone deacetylase 2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
gaf  Gambusia affinis (western mosquitofish)
Pathway
gaf03082  ATP-dependent chromatin remodeling
gaf03083  Polycomb repressive complex
gaf04110  Cell cycle
gaf04330  Notch signaling pathway
gaf04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    122824839
   03083 Polycomb repressive complex
    122824839
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    122824839
   04350 TGF-beta signaling pathway
    122824839
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    122824839
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gaf03036]
    122824839
Enzymes [BR:gaf01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     122824839
Chromosome and associated proteins [BR:gaf03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     122824839
   HDAC complexes
    Sin3A-HDAC complex
     122824839
    BRAF-HDAC complex
     122824839
    REST complex
     122824839
    SHIP complex
     122824839
    MiDAC complex
     122824839
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     122824839
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    122824839
  Chromatin remodeling factors
   NuRD complex
    122824839
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 122824839
NCBI-ProteinID: XP_043961596
LinkDB
Position
LG22:complement(21738258..21751490)
AA seq 489 aa
MAYTTAGGTRKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEVYRPHK
ATADEMTKYHSDDYIKFLRSIRPDNMSEFSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSA
AGSVKLNRQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIH
HGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYG
QIFKPVMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIRGHAKCVEYMKSFNLPLLML
GGGGYTIRNVARCWTYETAVALDTDIPDELPYNDYFEYFGPDFKLHISPSNMTNQNTMEY
MDKIKQRLFENLRMLPHAPGVQMQAIPEDAVPEDTVDEDTEDPEKRLSIRATDKRIACDE
EFSDSEDEGQGGRRNTANHKKGAKRPKVDEEKESEEKKADVKEEDKTIDSGSEKAESKGT
VKTEQTSST
NT seq 1470 nt   +upstreamnt  +downstreamnt
atggcttacaccacagcaggtgggaccaggaagaaggtctgctactactacgacggtgac
ataggaaattattactacggacaaggccatcccatgaagccgcaccgcatccggatgacc
cacaacctccttctgaactacgggctgtacagaaagatggaggtctatcgaccacacaaa
gccactgcagacgagatgaccaagtaccacagtgacgactacatcaaattcctcagatcc
atccggccggacaacatgtctgaattcagcaagcagatgcagcgattcaatgttggggag
gactgccctgtgtttgacggcttgtttgagttctgtcagctgtcggcagggggctctgct
gctggctcggtgaagttgaaccggcaacagacggacattgcagtgaactgggctggagga
ctgcaccacgccaagaagtctgaagcttcaggcttctgctacgtcaatgacattgtgtta
gccatcttggagctgctcaaataccaccagagggtgctctatattgatatcgacattcat
catggcgatggagtagaggaggcattctacaccacagacagagtcatgaccgtgtccttt
cataaatatggggagtactttcctggaaccggagacctgagggacatcggagctggaaaa
ggcaaatattacgctgtcaacttcccactgagggacggcattgacgacgagtcctacggg
caaatcttcaaacctgtgatggccaaggtgatggagatgtaccagcccagcgccgtggtg
ctccagtgtggcgccgactctctgtctggagaccgcctcggctgcttcaacctcaccatc
cgaggtcacgccaagtgtgtggagtatatgaagtcgtttaacctcccattgctgatgctg
ggtggaggaggatacacgatccggaatgtagctcgctgctggacctatgagacggccgtt
gctctggatacagacatccctgatgaacttccatacaatgactattttgagtactttgga
cctgacttcaagctgcacatcagcccctccaacatgacaaaccagaacacaatggagtac
atggacaagatcaagcagcgactgtttgagaacctgcggatgctgcctcacgcgcctggg
gtccagatgcaggccatcccagaagacgctgtcccagaggacacagtggacgaggacact
gaggaccctgagaaacgcttgtccattcgtgccacagataagaggatagcctgtgatgaa
gagttctccgactctgaggatgaggggcagggtggcaggaggaacacagccaatcacaag
aagggcgctaaaagaccaaaagtggacgaggagaaggagagcgaggagaagaaagcagat
gtgaaagaagaggataagacaatagacagcggctcagaaaaggctgaatccaaaggaacg
gtgaagaccgagcagaccagcagcacctga

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