Gambusia affinis (western mosquitofish): 122824870
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Entry
122824870 CDS
T07758
Symbol
casp8ap2
Name
(RefSeq) CASP8-associated protein 2 isoform X1
KO
K25593
CASP8-associated protein 2
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122824870 (casp8ap2)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
122824870 (casp8ap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding_7
bZIP_1
DUF2959
INO80F
Motif
Other DBs
NCBI-GeneID:
122824870
NCBI-ProteinID:
XP_043961641
LinkDB
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Position
LG22:22336677..22347935
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AA seq
1836 aa
AA seq
DB search
METFDASDSVDPGLDEDSVDIYEGLDAAGVGSNTEKWPSVGSGLKDSLDLYEDIVAEEQN
NRETSYTELKCRFEAAQHQIKELHRRLQQMETQNTGLSSENNRLKKNISALLRTARQEIV
RKDAEIKQLTQQVQRFHHHHQPRIKQAQDSPSSFQASSSCSSTRTLSPPSSRPLVLPPPP
NPPPHFAPPISSQFEEEPPPADAPQPTSKETCHFSRSMKSSTHNCSKRHETAEKLPGVDG
CTSRDREVKGQSYKLSESAERRLRDCSHHNKESEQKQAYKEDKDTRKGFDSQSHKNKKYQ
NVGRHCRSDGAKTSSQEHFHSAASSEHRREGRKIQRTDKASSIEHAKVSGQQSVGSCSSE
SRKIPRCHKYDNWSSPKNKRSSSPNQSTKRCGDGSRERERSRQRDRQRSVDRRCEDEIRS
RHHRRSSQKESSRDWEKHRDKLTGRADESKEGRRETKPRDVKRSSEEPSPEANTSINDNS
NRKLCFMETLNLTLSPIKKYTAPRDSSLEEPLRLEGDVDENSQPNLDNMCVIDEVDGGEL
GSEPGPGHAAEQALEEFKAPLNQTSNMEDGNNGGESQGRPLAALISSLWRPPQGPADTTK
DLKHPEELLELISNSWITERGQLEVTKSSQPNNTPPQILAQHSSSEALTSEVHQAAAAAE
HEHTAADEHAAAEHEHTAADEHAAAEHEHTAADEHAAAEHEHAAADSGEAPAPARLSQST
VSEAAASAQPDDTHGTEEVYEEARLRDGWGHQAASPGTSQPSSTSVTMDNHPIGQPQSSK
DLDSVSSTICLTSLPQKGLSLTEDICAMTQIDTDPRTSSPQPSSSVDCIGVSKVSSTTEE
LSPATITPKKFCSQDCKKELSSFVVLSHDEDSMMHTLSNLKRIPEVISPLRSPAQTAKRG
VLHVHSKLGHVKSLQKDFFTSAAETNLMKLDVNKENKYPGSPANRGAQDMVNMESEQISS
PFDTELEEGEILSESDEATSSSPVPATKRAKLMEPVRNKPSLQSSSRKKSEERRVASKEP
LDSAAVSTQSPRSRFKTVCPSASKASFSTVEEIMETFKMVRTEMRKKYMKLHKTFPKKSF
WGVMDNFQKSFLEFVDGAHFGQICRDAEELKSKLRKLITSVFSKVLNNGIVKRIFEQQAV
NLKQKLWDFVDVQVDYLLMDIQTTLKSLCQAVWTPTEDKRPGGQGTKPQQAPVKKPLCKQ
NKSHPPNPSLGQTKSCAVVPYRTGLGSRGKDIRMSYTEKDGATHIHPPGRINTQTTVNFL
SDSNAASSPDKTKMVIPQNGSVIDRTDFELLTEQQASSLTFNLVRDSQMGEIFKCLLQGS
DLLESTGMCGDNTAWAVGTPRKDGERFLNFATPSKVLSPSKSDTSARLIATWSSISPRQR
SSPCTKTPIPLHPALFDESCLLEVPSGNRALLQGSLAAEKYSILAEDLAVSLTIPSPLKS
DSHLSFLQPAGVGIHVVSTPDSVISAHISEDALLDGEDATEQDIHLALDNSSCSSRDSTA
SQTPGSTLFFKPDVPMQALVMEKSNDHFIVKIRQMNVSAEGTLIAGEPFSQTLIEKNQQH
EEDDAQERLKVAGQTEKKLCVTGNPTSGSHTQGQRQTPGINPSNPRQDTSTQSGKTTRET
DPSDPSSNTSSPTFHSSLVPDPSRTQLQVEATPPKLFPLQSQKQTSPPSVTLSPNITASK
TLFYDSGREETTVSESEKSLTIDTSSSSEKTSRDCEQLRKRKRRQEKLKAKRCKNEDKSL
QEVSPSRKNDEELKPSPAALSPSSLSAKNIIRKKGEVVMAWTRDEDRAILMFLKTKRASR
ETFSTLSEKLNKPSGQIAHRFYQLMKLFKKQGKMDM
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atggaaacatttgatgcctctgactcggtggaccccgggcttgatgaagactctgtggat
atctatgaaggcctggatgctgctggggttggcagcaacactgaaaagtggccttctgtt
ggttctgggctgaaagactcactggatctttatgaggatatagtggctgaggaacagaac
aacagggagacatcatacaccgagttaaaatgcagatttgaagcagcccaacatcaaatc
aaagagttgcacagaagactacagcagatggaaacacagaatactgggttgagcagtgag
aacaatcgtcttaagaagaacatctctgcacttttacgaacagcaaggcaagaaattgtt
cggaaagatgctgagatcaagcagctgactcagcaggtccaaagatttcatcatcatcat
cagcctcggataaaacaagcccaggattcaccttcatcttttcaagcctcctccagctgt
tcctcaacaagaacactttcaccaccttcttctcgtcctcttgttcttcctcctcctcct
aatcctcctcctcattttgctcctcctattagttcccagtttgaggaggagcctcctcca
gcagatgctcctcaacctacctcaaaggaaacttgtcatttcagcagatccatgaagtcc
tcaactcataattgctcaaaaagacatgaaacagctgaaaaactgcctggagtagacggg
tgcacttccagagatagagaggtcaaaggtcaaagttataaactgtctgaatcagcagaa
aggaggcttagagactgttcccatcataacaaggagtctgagcaaaagcaagcttacaaa
gaagacaaagacactagaaaggggtttgactcccagtctcacaaaaataagaaataccaa
aatgttgggagacactgccgatcagacggagctaaaacttcttcacaagaacattttcac
tctgcagcttcctctgaacacagaagagaaggcaggaaaattcagagaacagataaagcc
agctccatagagcatgctaaagtttctggtcagcagtcggtagggagctgcagctcagag
tccagaaaaatccccagatgtcacaaatatgataattggtccagtccaaagaacaagaga
agctcctctccaaatcagtccacaaaacgctgcggtgatggcagtagagaacgggaaagg
agcagacagagagaccgtcagagaagtgtggacagaaggtgtgaggatgaaatcaggagc
aggcatcacagaagaagcagtcagaaagagagcagcagagactgggagaaacacagagat
aaactgacggggagggctgatgaatccaaggaaggacgacgggaaacgaaacctagagat
gtgaaaagatcctctgaagaacccagcccagaagcaaatacttctataaacgacaactca
aacaggaagttgtgttttatggaaacactgaatctaactctttcaccaatcaaaaagtac
acggcgcccagagatagcagcctagaggaaccgctaagactagagggtgatgttgatgaa
aactcccagcctaacctagacaacatgtgtgtcattgatgaggtagatgggggtgagcta
ggatcagaaccaggaccaggacatgctgcagagcaagccttggaggagttcaaagcgcca
cttaaccagacgtccaacatggaagatggcaacaatggaggtgaatctcaagggagaccc
ctggctgccctcattagctccctctggaggccaccccagggtccagcagacacaaccaaa
gacttgaaacatcccgaggaactgctggagctgatctccaacagctggataactgaaaga
ggtcagctggaggtcacaaagagctcccagcccaacaacacacctccacaaatcctggcg
caacatagtagctctgaagcactgacctctgaggttcatcaagctgcagctgcagctgaa
catgaacatacagctgctgatgaacatgctgcagctgaacatgaacatacagctgctgat
gaacatgctgcagctgaacatgaacatacagctgctgatgaacatgctgcagctgaacat
gaacatgctgcagctgattcgggtgaagctcctgctccagctaggctctcccagagtaca
gtcagtgaagctgcagcttcagctcagccagacgacacacacggtactgaagaggtatat
gaggaagccagactcagagatgggtggggtcaccaggctgcatcccctggtaccagccaa
ccgtcttctaccagtgttaccatggacaaccatcctattggccaaccacaaagctctaaa
gacttggattcagtgtctagcactatctgtctgacctcacttcctcagaaggggctgagt
ctgaccgaggatatttgtgcgatgacccagatagacacagaccccaggacctccagcccc
cagcctagctcctctgtagactgcattggggtatccaaggtcagcagtaccacagaggag
ctcagccccgctacaattacccctaagaagttttgcagccaggactgtaaaaaagagctg
tccagttttgtggtcctgtctcatgatgaagactccatgatgcacaccctgagcaacctg
aagaggattcctgaggtcatcagccccctgaggagcccggcacagacagccaagagaggt
gtcctccatgtccacagcaagctgggacatgtgaagagtcttcagaaagattttttcacc
tctgctgctgagaccaacttgatgaagttggatgttaataaggagaacaaatatccaggt
tctcctgctaaccgaggagcacaggacatggtgaacatggagtcggagcagatttcaagt
ccttttgacaccgaactggaagaaggagaaattttaagcgagagtgatgaggcgacttct
agttctcctgttcctgccaccaagagggcaaagttaatggaaccagtcaggaataaaccc
agcctccagtcatcttcaagaaaaaaatctgaagaacggcgggttgcttctaaagaacct
cttgattcagctgctgtctcaacgcaaagtcccaggagtcgttttaaaaccgtttgccca
tcagcaagcaaagcatctttttcgactgtagaggaaataatggaaacattcaagatggtt
cgcacggagatgcggaaaaaatacatgaagcttcataaaacctttcctaaaaaaagcttt
tggggtgtgatggataatttccagaagtcttttttagagtttgtggatggtgctcacttt
ggccagatatgcagggatgccgaggagctgaagtccaagctgaggaaactaattacgtct
gtgtttagcaaagtgcttaataatggcatagtgaaacgcatttttgaacagcaagcagtc
aatctaaagcaaaagttgtgggactttgtagatgtccaagtggactacttgctcatggac
atccagacaacactgaagagtctctgccaagctgtctggactcccactgaagacaagagg
cccggtggacaggggaccaagcctcagcaggctccagtgaagaagccgctgtgtaaacag
aacaagtcccacccccccaaccccagcctgggccagaccaagtcatgtgcagtagtccct
tacagaaccggactaggcagcagaggtaaagacatccgtatgtcatacacagaaaaagat
ggcgccactcatatacatcctccaggacgcataaacacacaaactacggtcaacttcctg
tccgacagcaacgctgcctcttctccagacaaaactaagatggtgatccctcagaacggc
tctgtgatcgatagaacagactttgagctgcttactgagcaacaagcgtccagtttgaca
ttcaatttggtcagagactctcagatgggagaaatattcaagtgtcttctccaaggatca
gacttgttagaaagcacagggatgtgtggagacaacactgcctgggctgttgggacccca
aggaaggatggagagagatttctcaactttgccacaccatcaaaggtcctctcgccatcc
aagtctgatacttcagctagactcattgctacctggtccagtatttcacccagacagagg
tcatccccatgcaccaaaacccccatacccctccacccagccttgtttgatgaaagttgc
ctcctggaggttccgtctggaaacagagcgctgctgcagggcagcttggcagcagagaaa
tactccattttagctgaagatctggctgtctccctgacgattccatctcctcttaaatct
gacagccatctcagcttcctccagccagcaggcgttgggatccatgtggtatccacccca
gacagcgttatcagcgcacacataagtgaggatgctctgctggatggggaagacgctaca
gagcaggatatccacctggccctggacaactccagctgcagctccagagacagcaccgcc
tcccaaacgcctgggagcactctgttcttcaagcctgacgttcctatgcaggcactggtg
atggagaagtccaatgatcacttcatcgtaaagattcgacagatgaatgtgtctgcagaa
ggcacactaattgctggagagccatttagccaaacactgatagaaaagaatcagcaacac
gaagaagatgatgcccaggaacgtctgaaggttgctggtcagacagagaaaaagctctgt
gtcactggaaacccaacctctggatcacacacccaaggacagagacagactccaggaatc
aatccatccaacccaagacaagacacttctacccagtctgggaaaaccactcgtgaaacg
gatccatcagatcctagttcaaacaccagttcaccaactttccacagttcactagtccca
gatcccagtaggacacagctccaagtagaggcaactccacccaaattattcccactccag
tcccagaagcaaaccagtccccccagtgtcactttaagcccaaacattacagcatcaaag
acactgttctatgactcgggcagagaggagaccacggtgtctgagtcagaaaagagtctc
accatcgacacaagcagctcatcagagaaaacctccagggactgtgaacagctccggaaa
cggaaaagacggcaggagaagctgaaagccaaaagatgtaaaaatgaggacaagagtctg
caggaggtttctccatccaggaagaatgacgaggagttgaaaccttccccagcagctctg
tccccaagcagcctgtctgccaagaacatcatcaggaagaagggcgaggtggtgatggca
tggaccagagatgaagatagagccattctgatgttcctgaagaccaaaagagcttcacgg
gaaacgttctccacactgtctgagaaactaaacaagccgtcaggccagattgctcacagg
ttttaccagctcatgaagctttttaagaagcaggggaagatggacatgtga
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integrated database retrieval system
