Gambusia affinis (western mosquitofish): 122824967
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Entry
122824967 CDS
T07758
Symbol
col10a1b
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
gaf
Gambusia affinis (western mosquitofish)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
122824967
NCBI-ProteinID:
XP_043961878
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Position
LG22:complement(23341332..23349551)
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AA seq
656 aa
AA seq
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MDLRVTSLLFILLALAEGTPERYYAPKVTKVPYPVKSHSVAGPQGPPGPPGEPGPMGPSG
PPGERGVGHPGPRGPPGPPGASGLSQAGKPGTPGAPGKPGIPGAPGERGLNGATGPMGPR
GSPGTPGTPGPAGLSATGKPGPAGLPGPMGHRGEPGLKGHPGIPGLPGPKGERGIGVPGV
QGPPGGTGPMGPSGMPGKPGVGKSGSPGYPGEPGKAGMPGRDGAPGPMGLPGLKGHTGPP
GVGAPGKPGQNGTPGTPGPMGSRGPQGPAGQPGSPGMPGVGKTGEPGIPGSRGAPGSPGT
TGQKGEPGPTGFTGQPGAPGPIGPAGPQGARGFQGESGPVGPKGDIGMVGAPGPRGSKGE
QGAQGFTGKPGVPGAVGPPGVPGHNGAQGPKGSQGHGGPPGSPGANGVPGLKGHTGAPGA
PGKSGEPGLPGESGPVGPPGPSGPPGLKGHPGLPGPPGPAGLTAKGISGPMGPPGPPGQR
GHDGLPGPAGPPGPPGPPGEMVYHHEKSMPIKSHEVVMPHEVMKAPMSAFSAVLTMAYPP
AGTPIAFNQVLYNGENHYDPHSGVFTCQIPGLYYFSFHVHVNGANALVALYKNEEPSVFI
YDEYNKGFLDQMAGSAVFMLHPGDRVYVQVPDEESNGIFAADNVHCGFSGFLIAST
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggacttaagggtaacaagcctcctttttatcctcctggcattggccgagggaaccccc
gagagatactacgcgccaaaagtgacaaaggtcccgtaccccgtgaagagtcactctgtt
gcaggaccacaaggtcctccaggaccaccaggtgagccaggaccaatgggaccatctgga
cctcctggagaaaggggtgttggtcatcctggacctcggggccctccaggaccacctggc
gcctctggcctctctcaggctggcaaacctggtaccccaggtgctcctggaaaacccgga
atccctggtgcacctggtgaaagaggattaaacggtgcaactggaccaatgggaccaaga
ggttcccccggtacacctggaacccctggacctgctggactttcagccactggaaaacct
ggaccagcagggcttccgggtccaatgggtcacagaggagaacctggtttgaaggggcat
cctggtatccctggtcttcctggtcctaaaggagagagaggcattggtgttcctggggtc
cagggtccaccaggtggaactgggccaatgggcccatctggcatgcctggcaaacctgga
gttggcaagtctggttcccctggctatccgggagaacctggtaaggcgggaatgccagga
agggatggtgcccctgggccaatgggtttgccaggtcttaaaggtcacactggacctcca
ggtgtaggagcaccaggaaaaccaggccagaatggtaccccaggtacacccgggcctatg
ggatccagaggtccacagggacctgctggtcaaccaggctcccctggtatgccaggtgtt
ggtaagactggtgaacccggaataccaggatccagaggagctccaggaagtccaggaacc
actggtcagaaaggagaaccaggcccaactggatttactggtcaaccaggtgctcccggt
cctatagggccagctggtccacagggtgcaagaggatttcagggtgagtcaggcccagta
ggacccaaaggtgatattggtatggttggtgcaccaggcccaagaggatccaagggtgag
cagggagcacaaggctttactggaaaaccaggtgttcctggtgcagtaggtcccccagga
gttccaggccataatggagcgcagggtccaaagggttcacaaggccatggtggccctcca
ggaagtcctggtgcaaatggtgtacctggacttaaaggacacacaggggccccaggagca
ccaggtaaaagcggtgaacctggactgccaggagaatcaggaccagttggcccccctggt
ccatcaggcccccctggacttaagggacacccaggtctcccaggtccacctggtccagca
ggcctgacagctaagggaatttctggccctatgggtcccccaggacctccaggtcagaga
ggccatgatggtctccctggtcctgctggtcctcctggtccacctggtcccccaggagag
atggtgtaccaccatgaaaagagtatgccaatcaagtcccacgaggttgtgatgcctcat
gaagtgatgaaggctcccatgtctgcctttagtgctgtgctgaccatggcctacccccct
gctggaacccctattgctttcaaccaggttctttacaatggagagaaccactatgacccc
cacagcggtgtgttcacctgtcagatcccaggtctttactattttagcttccacgtgcat
gtcaatggtgcaaatgcattggtggccctctacaaaaatgaggagccttcggttttcatc
tatgatgaatacaacaagggcttcttggatcagatggcaggcagtgctgtttttatgctg
cacccgggggacagagtctatgttcaagttcccgatgaggaaagcaatggtatatttgct
gctgacaatgttcactgtggcttctctgggttcttgattgcctcaacgtga
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