Gambusia affinis (western mosquitofish): 122824990
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Entry
122824990 CDS
T07758
Symbol
lrfn5b
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gaf04990
]
122824990 (lrfn5b)
Domain-containing proteins not elsewhere classified [BR:
gaf04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
122824990 (lrfn5b)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_5
LRR_4
ig
Ig_2
LRR_9
LRR_14
V-set
fn3
Sp38
LRR_EndoS
DHU1_N
C2-set_2
Ig_DSCAM-DSCAML_C
LRR_Zer-1
LRRCT_2
DUF6182
Ig_5
Motif
Other DBs
NCBI-GeneID:
122824990
NCBI-ProteinID:
XP_043961930
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Position
LG22:15515752..15538751
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AA seq
801 aa
AA seq
DB search
MESFLVYLIVLGVAVKAHKVQICPKRCVCQMLNPNLATLCDKKGLLFVPPNIDRHTVEMR
LGDNFVTSIKRKDFANMTKLVDLTLSRNTIGSIAPYAFRDLENLRALHLDSNRLTRITND
TFSGMSKLHHLILNNNQLTHIHSGAFNDLTALEELDLSYNNLESAPWIAIQRMSSLHTLN
LDHNMLSLIPEGTFSGLQKLKRLDVTSNKLQKLPPDPVFQRAGVLATSGIMGPLSFALSF
GGNPLRCNCELLWLRRLQREDDLETCASPQHLAGRYFWTVSEEEFLCEPPLITRHSQELH
ALEGQSVTLRCKARGDPDPVIHWIAPDARLMSNSSRAVVHTDGTLEILISTVKDSGSFTC
VASNPAGEAHQTVDLLIAKLPHITNDTIAEQEPDPGSSDIATVTKTGAEAGGVPLGNAKT
SQEKKVVIAEATSTSALVKFNFHRSIPGIRMFQIQYNGTYDDSLVYRMIPPTSKNIMVNN
LAAGTQYDLCVLAIYDDQVTSLTATRVIGCVHFTTEPQYLRCHFMQSQFLGGTIVVIIGG
IIVASVLAFIIFLIVRYRVCNQGDADKALEMGDIRSLSSDGHLQGCGIPKSLSKQVLRPE
KNDKECARVALPPPEPTKQRPPVSVPTTKPSVPDCMVSTSAGSHSWHPASPGAPRPKRSG
APPKPSEGRRAEAQTDVELNNMNRNNSSEVKTATAVSTAAPGPGQPQKWTATPRVLRPHQ
ASRHYMTVPAGAVRVNRRHSLNADSSYRERCYVAYPKVGAGLRSKRSLSMSGELPQLEST
TNIHRARDKLSRSEWLLESTL
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgttcctggtctacctgatcgtcctcggcgtggctgtgaaggcccacaaggtc
cagatctgccccaaacgctgcgtctgccagatgctgaaccctaacctggcgacgttgtgc
gacaaaaaggggctgctgtttgtgccccccaacatcgacaggcacacggtggagatgcgg
ctcggcgataacttcgtcaccagcattaagcgcaaggattttgccaacatgaccaagctg
gtggacctgaccctctctcgcaacaccatcgggtccattgcaccgtatgccttcagagac
ctggagaacctccgagctcttcacctggacagcaaccggctgacccgcatcaccaatgac
accttcagcggcatgtccaagctgcaccacctcattctcaacaataaccagctcacccac
atccacagtggggccttcaacgacctaacagcgctggaagagctggacttatcctacaac
aacttggaaagcgccccgtggatagccattcagaggatgtccagcctccataccctcaac
ctggaccacaacatgctcagcctgattccagagggcactttctctgggctgcagaagctt
aagaggctggacgtaacctccaacaagctgcagaaactccctcctgaccccgttttccaa
agagccggcgtcctggcgacgtctggcataatggggcccttgtcgttcgcgttgagcttt
ggcggcaacccgttgaggtgcaactgcgagctgctgtggctgcggaggctgcagagggag
gatgatctggagacctgcgcttccccacaacacctggctgggcgttatttctggactgtt
tcagaggaagagttcctgtgtgagccgcctcttatcaccagacactctcaggagctgcat
gctttagagggccagagcgtgactctgcgctgcaaagccaggggcgacccggaccccgtc
atccactggatcgcgccggacgcgcggctcatgtccaactcttccagagccgtggtccac
acagacggcacgctggagatcctcatcagcaccgtcaaggactcaggttccttcacctgc
gtggcctccaacccggccggagaggcccaccagacggtggatctgctcatcgctaaactc
cctcacatcaccaacgacacgatcgcggagcaagagcccgaccccggatcatcagatatc
gccacagtgaccaagacgggagccgaggcgggaggggtgcctctggggaacgcgaagacg
agccaggagaagaaggtggtgatagccgaggccacctccacctcggccctggtgaagttc
aacttccacaggagcatccctggaatccgcatgtttcagatccagtacaacggcacatac
gatgactcgctggtgtacaggatgatccccccaaccagcaagaacattatggtcaacaac
ttggcggctggcacgcaatacgatctgtgcgtcctggccatctacgacgaccaggtcacc
tcgctgaccgccaccagggtgataggctgcgtccacttcaccaccgagccgcagtacctg
cggtgccacttcatgcagtcgcagttcctcggcgggaccatcgtggtcatcattggagga
attatcgtggcatccgtgctcgccttcatcatcttcctcattgtgcgttaccgagtgtgt
aaccaaggggatgcagacaaggccctggagatgggggatatccgatcactgagcagcgat
ggacatctacagggctgtggcatccccaagtccctttctaaacaggtcctccgtccagag
aagaatgacaaggaatgtgccagagtcgccctcccacctccagaaccaaccaagcaacga
cctcccgtctccgtgcccaccacgaaaccttctgttcctgactgcatggtgtctacctct
gctggcagccatagctggcacccggcctccccaggagcgccgaggcccaagcgttccggg
gctccaccgaaaccctcagagggccggcgggctgaagctcagacggacgttgagctcaac
aacatgaaccgcaataactcttcagaggtcaaaacagccactgccgtctccaccgctgcc
cccggtcctggccaaccccagaaatggactgctactccgagagtcctccgaccccaccaa
gcctcccgacattacatgactgtccctgcaggagcggtgagagtgaaccgcaggcactcg
cttaacgcagactcgtcgtacagggagcgctgttacgtagcctaccccaaagtcggggcc
ggcctgcgctctaagcgcagcctgtcaatgagcggagagcttccgcagctcgagagcaca
acaaacattcatcgagccagggacaaactatccaggtctgagtggctgctggagagcact
ttatga
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