Gambusia affinis (western mosquitofish): 122825069
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Entry
122825069 CDS
T07758
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B-like isoform X1
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04020
Calcium signaling pathway
gaf04080
Neuroactive ligand-receptor interaction
gaf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122825069
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122825069
04082 Neuroactive ligand signaling
122825069
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122825069
Ion channels [BR:
gaf04040
]
Ligand-gated channels
Glutamate (ionotropic)
122825069
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Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
122825069
NCBI-ProteinID:
XP_043962073
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Position
LG22:complement(3735888..3756100)
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AA seq
1240 aa
AA seq
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MSLTSSLSWFRTFRTLRTFLVVQLFLGPGCHLHPQPCHLLAQIGHAVRVGALLPAQREAR
LQVQAALSRTAAALSRDRNRDQDPDPERVNFLPYNLSVELVSRQLAAADPESLIRCACQR
VLERGVSAALAFPQSREELLQVDLLAAALRVPVVSLIEHAEPLRTQNRFHLQMVTGFPES
VLSDLLLAVLRRSGWREGTVVLCRGWEEAGGLLRFLDSQTSGPWDGSVTWHLQALLNLTQ
SAHDDTQIHDFLSRHFRRNQPPPAAVLLFGADPECTAAVLRSAQDLGLTLPLVHWVLGQP
LSPDVLHTFGLPLGLLAYGEVDRKPLDFYIRDALQLITRAVAAATVVRPDLALVQNTVSC
HDTPEAPTAGWYLSRFLANTSFSGLTGLVGVDQKRSLVLTSQRFHIWSLRRDALGQPAWV
TVGSWEDGQLQVEDQEVWRGPKPRRRAEVEADVGGRWRPGDACGGDPGPVVTLVEHPFVF
TRDVDDDSSCPAGQFCLDAGTNSSETLERYFWEVAAGNGSSLPLEYRKCCYGYCIDLLEK
LAEDLGFHFDLYIVGDGKYGGVEGGRWTGLVGDLLSGLADMAVTSFSINSARSRVIDFTS
PFFSTSLGILVRSKDTAAPIGAFMWPLHWSMWVGIFLALHITARSSSPCTQWKSPFGMTP
HGRNRVRVFSYSSALNLCYAILFGRTVSSKTPKCWTGRFLMNLWAIFCLLVLSSYTANLA
AVMVGEKTFEEVSGIHDAKLHHPSQGFRFGTVRESSAEDYMKKSFPEMHEYMRRFNEPTT
PEGVATLKTDPPQLDAFIMDKALLDYEVSIDAECKLATVGKPFAIEGYGIGLPQNSPLSS
NLSEFISRYKSDGYMDLLHDKWYKVVPCGNRVFAVTETLQMGISHFSGLFVLLCVGVGGA
LLTLAGEHGFYQLILPHIRRRQNLKYWLHTSQVSHDVTSEKNFMFLERRTEFLISFPQKI
HRALNLTYDDVKRQRAEREKSCNLEKTQAGQGPASPWVPPGPSVPTAAARWDDESRKETP
AAADARDFKRVHFSLETLNTRRLLARLAVSEAKGGGAKGDRAGPMKPGAGPSSRLCENGG
PAASLASLVLSLPSSSSVRTNAPPLPGVTPPIPIISQPLPDATPPVPDTATPLPVVATPL
PAELAALQQQIDQMREKLRAALARRADIQTSLAKPVSMATTSPPPVLVTSTGIPSPTLPA
ITMATSLSPNRKSVMTMTAPPHRVLSKVPPLRSRLSNQRR
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcacctcttcgttgtcctggttccggactttccgaactctccgaaccttcctg
gtcgtgcagcttttcctgggtccggggtgccacctccacccgcagccctgccacctcctg
gcgcagatcggacacgcagtgcgcgtcggtgcgctcctgccggcgcaacgggaggctcgt
ctccaggtccaggcggcgctgagccgcacggcggccgctctgagccgggaccggaaccgg
gaccaggatccggaccccgagcgggtgaacttcctgccctacaacctgagcgtggagctg
gtgtcccggcagctggccgccgcggacccggagtccctcatccggtgcgcgtgccagcgc
gtgctggagcgcggagtttccgccgcgctcgccttcccgcagagccgcgaggagctgctg
caagtggatctgcttgccgccgcgctgcgcgtgcccgtcgtcagcctcatcgagcacgcg
gagccgctgcgcacgcagaaccggttccacctgcagatggtgacagggtttccagaatct
gtgctgtctgatctgttgctggcggttctgcggcggtccggttggagggaagggactgtg
gttctgtgccgaggctgggaggaggcgggtggcctcctgcggttcctggactcgcagacc
tctggtccttgggacggatcagtcacctggcacctgcaggcgctgctgaacctgacccag
tcggcccatgacgacactcagatccacgacttcctgtcccgacatttcagacggaaccag
cctccgcctgcggcggtgctgctgtttggagcagaccccgagtgcacggcggcggtgctg
cgcagcgcccaggacctcgggctgaccctacccctggtccactgggttctgggccagcca
ctcagtcccgacgtgctccacaccttcggcctgccgctcggcctgctggcctacggagag
gtggacaggaagccgctcgacttctacatcagagacgccctgcagctgatcaccagagct
gtcgccgcggcgaccgtggtaagaccagacctggctctggtccagaacacggtgagctgc
cacgacacaccagaggcaccaacagcagggtggtacctgtccaggttcctggccaacacc
tccttctctggactaacgggtctggttggcgttgaccagaagcgctctctggttctgacc
tcgcagcggttccacatctggagcctgcggcgtgacgcgctgggtcagccggcctgggtg
acagtgggcagctgggaggatggccagctacaggtggaggaccaggaggtgtggcggggg
cccaaaccccggcgccgggccgaggtcgaggcggacgtggggggccgctggaggccaggg
gacgcctgtggcggggacccgggtccggtggtgaccctggtggagcatccctttgtgttc
acgcgggacgtggacgacgatagcagctgccccgccggccagttctgcctggacgccggc
accaacagctcagagactctggagcgctacttctgggaggtggcggccgggaacggcagc
tcactgcctctggagtacaggaagtgttgctatggttactgcatcgacctgctggagaaa
ctggctgaggacctgggcttccactttgacctctacatcgtcggagatggaaagtacgga
ggcgtggaaggcggccgctggacggggctggtgggcgacctgctgagcggcctggccgac
atggccgtcacctccttcagcatcaactccgcccgcagccgtgtcatcgacttcacctcg
cccttcttctccacaagcctgggcatcctggtgcggagcaaggacacggcggcccctatc
ggagccttcatgtggcccctgcactggtccatgtgggtgggcatcttcctggcactccac
atcaccgcgcgctcttcctcaccctgtacacagtggaagagtccgtttgggatgacgcct
cacggtcgcaacagggtcagggtgttctcctactcctcggctctgaatctgtgctacgcc
atcttgtttgggcgaacggtgtcgtccaagacgccaaagtgctggaccggccgcttcctg
atgaacctgtgggccatcttctgcctactggtgctatccagctacaccgccaacctggca
gccgtcatggtgggggagaagacctttgaggaggtctctgggatccacgatgccaagctg
caccatccatcgcagggcttccgctttgggacggtgagagagagcagcgctgaagattac
atgaagaagagcttcccagaaatgcacgagtacatgcggcgcttcaacgaaccgacaacg
cctgaaggagtcgccaccctaaagacagatcctcctcagctcgatgccttcatcatggac
aaggccctgctggactacgaagtttccattgatgccgagtgtaaactggcaacagttggg
aaaccctttgccatcgaaggttatggcatcggactcccccagaactctccgctgagctcc
aacctgtccgagttcatcagcaggtacaagtccgacggctacatggacctgctgcacgac
aagtggtacaaggtggttccctgtgggaaccgagtgttcgccgtgaccgagactctgcag
atgggcatcagtcacttctctggactcttcgtgttgctgtgcgtcggagtgggcggagct
ctgctgaccctcgcaggtgaacacgggttttaccaactcatcctgccgcacatacggcgc
cggcagaacctgaagtactggctgcacacgtcccaggtgagtcatgatgtcacctcagag
aagaacttcatgttccttgaacggagaactgagttcctgatttctttcccacagaagatc
caccgagcgttgaatctgacgtacgacgatgtgaagaggcagcgggccgagagggagaaa
agctgtaacctggagaagacccaggcagggcagggccccgcgagtccctgggtacccccg
ggaccctcagtacccactgccgctgccaggtgggacgacgagtccaggaaggaaactcca
gctgctgcagatgctcgagacttcaagcgagttcacttcagtctggagaccctgaacaca
cggcgcctgctggcccgcctggcggtctcagaggcgaaggggggcggggctaagggtgac
agggcgggacccatgaaaccaggggcggggccaagcagccggctatgtgagaatggggga
ccggcagcttcattggccagtctggtgctctcactgccctcctcttcctctgtgaggacc
aatgccccgccccttcctggtgttactcctcccattccaataatatcccaaccccttcct
gatgcaaccccgcccgttcccgatacggctacgccccttccggtggtggccacgcccctt
cctgcagaattggcggcgctgcagcagcagattgatcagatgcgggagaagctgagggct
gcgttggctcgccgggcggacatccagacctccctagccaagcctgtttctatggcaacc
accagcccacctccagttttggtgacttctacagggatcccgtcccccaccttacctgcc
atcaccatggcaacaagtctatctccaaacaggaagagtgtgatgaccatgacagccccc
cctcacagggtgctatccaaagtcccgcccctccgcagcaggctgtccaatcagcggagg
tga
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