Gambusia affinis (western mosquitofish): 122825135
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Entry
122825135 CDS
T07758
Symbol
ptchd4
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gaf04990
]
122825135 (ptchd4)
Domain-containing proteins not elsewhere classified [BR:
gaf04990
]
Other domain-containing proteins
Patched domain-containing proteins
122825135 (ptchd4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
DUF7041
Motif
Other DBs
NCBI-GeneID:
122825135
NCBI-ProteinID:
XP_043962203
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All DBs
Position
LG22:complement(20658624..20696144)
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AA seq
921 aa
AA seq
DB search
MCFIGGDGASASRILWRMLRQVIHRGLRASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTV
LSRFKPERDLEVLVAPTHSLAKIERSLANSLFSIDQSKHKLYSDLHTPGRYGRLILLARS
GGNILELADQVLQVHRQVLELRVTYKGFNYTFAHLCVLSHRDRRCLLDDIVTVFQDIQQA
VLSNSSFHKVPLSYPNTTLKDGRVSFIGHQLGGVSFSPNSRDQQVKFARAVQITYYLRSI
GPVVQDVIAERWENEFCALVTRLSTAEAPHPTDQLHILSLTSSSLWRDFHQTGMLSKGEV
LVSLVLVLLAATISSSMRDCLRGKPFLGLLGVLTICIANVTAAGIFFISDGKFNSTLLGI
PFFAMGHGTKGVFELLAGWRRTRENLPFKERVADAFADVMVCYTMTSSLYIITFGMGASP
FTNIESVKIFCQSMCVAILVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYLDR
QPTWFKTMMSDGHDLSTHHDSVPYQNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASF
SFMGCLQISDGSNIVNLLASNSPSVSYAVTQQKYFSNYSPVIGFYIYEPIEYWNSTVQEH
LKTLSHGFNKISWMDNFFHYLRVVNISASTKSDFINILKGSFLRSPEYQHFTEDIIFSKN
RNTDEYDIIASRMYLVARTTEKKREEVVELLEKLRPLMLINSIKFIAFNPTFVFMDRYSS
SVISPILTSGFSVLTILILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVGMDSISI
LCLIYTLNFAMDHCAPHLYTFVLATEHTRTQCIKLALEEHGAAILQNTSCFVIGIMPLVF
VPSNLTYTLFKCSLLTAGCTLLHCFVILPVFLTFFPPSKKRHKKKKRAKRKERERERERE
REREEIECIEVRENPDHVTNV
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcatcggaggagacggggcatctgcgagccggattctgtggaggatgctgcgg
caagtgatacacagagggctcagggcttccttctactggctcggcttgttcgtcagcagg
caccccgtcttcttcctcaccgtccccgcggtgctcaccatcatcttcggctccaccgtg
ctcagccgcttcaagcccgagcgggacctggaggtgctggtcgccccgactcacagcctg
gccaagatcgagcgcagcctcgccaacagcctgttctccatcgaccagtccaagcacaag
ctgtactcggatctgcacacgcccggcagatacggccggctcatcctgctggccaggtcc
ggcggcaacatcctggagctggccgaccaggtcctgcaggtccaccggcaggtgctggag
ctgcgcgtcacctacaagggcttcaactacacgttcgcgcacctgtgcgtgctgagccac
cgggaccggcgctgcctcctggatgacatcgtcaccgtgttccaggacatccagcaggct
gtgctgtccaacagcagcttccacaaggtgccgctcagctaccccaacaccactctaaag
gatggacgtgtgtccttcatcggccaccagcttggtggggtatccttctcacccaacagt
cgggaccagcaggtcaagtttgcccgggccgtccagatcacatactacctccgtagcatc
gggcctgtcgtgcaggacgtcatcgcagagcgctgggagaacgagttctgcgctctggtc
accagactgtccacggccgaggcgccgcacccgaccgaccagctccacatcctgtcgctc
acttcctccagcctttggcgggacttccaccagaccggcatgctgtccaaaggggaggtg
ctggtcagtctggttctggtgctcctggctgccaccatttccagctccatgcgggactgc
ctgagggggaagcctttcctcggcctcctgggcgtgctgaccatttgcatcgccaacgtg
acagctgcagggatcttcttcatatcggatgggaagttcaactccacactgctgggaatc
ccgttctttgccatgggtcatggaaccaaaggggtgtttgaactactggcaggctggagg
agaacaagggaaaaccttcccttcaaggagcgcgtggccgacgccttcgccgacgtgatg
gtgtgctacaccatgaccagctcgctctacatcatcaccttcggcatgggagccagccct
ttcaccaacatcgagtcggtgaaaatcttctgccagagcatgtgcgtggccatcctggtc
aactacttctacgttttctctttttacggctcctgcctggtgttcgccggacagctcgag
cagaaccgctaccacagcgttttctgttgcaagatcccctcagtggaatacttggaccgc
cagccgacatggtttaaaaccatgatgagcgacggccacgacctgtccacccaccacgac
agcgtgccgtaccaaaatcacttcatccagcacttcctgcgtgagcattacaccgagtgg
attactaacacctacgtcaagcctttcgtggtcatcctttatcttatctatgcttctttt
tcattcatgggatgtttacaaattagtgatggatcgaacatagtgaacctgctggctagt
aactcgccaagcgtttcgtacgccgtgacccagcagaagtacttcagtaactacagtcct
gtgattgggttttacatctacgagcccatcgagtactggaactccactgtgcaggagcac
ctgaagactctcagtcatggcttcaacaagatctcttggatggacaactttttccactac
ctccgggtggtgaacatcagcgcgtcgaccaagagtgacttcatcaatattctgaagggt
tctttcctgcgcagcccggagtaccagcactttacagaggacatcatcttctcgaaaaac
cgcaacactgacgagtacgacatcatcgcctcgcgcatgtacttggtagcgcggaccacg
gagaagaagagagaggaggtggtggagctcttggagaagcttcgccccttgatgctgatc
aacagcatcaagttcattgccttcaatcccacgtttgttttcatggaccgctacagttcc
tccgtcatctcgcccatcctgacctcaggcttcagcgtgctcaccatcctcatcctcacg
ttcttcctggtcatcaacccattgggaaacttctggctcattctcacggttacgtccgtg
gagctgggcgtcttgggtttgatgaccctctggaacgtcggcatggacagcatctcaatc
ctgtgccttatttatactctcaacttcgctatggatcactgtgcaccacacctgtacact
tttgtgttggccactgagcacacgaggacgcagtgcatcaagttggcactggaggagcac
ggggcggccatcctgcagaacacgtcctgcttcgtgattgggatcatgcctctagtgttt
gtgccttccaatttgacctacacgctgttcaagtgctccctgctcacggcgggctgcacc
ttgctgcactgtttcgtcatcctgcccgtcttcctgacgttctttccgccgtccaaaaag
aggcacaagaagaaaaagcgggcgaagcggaaagagcgggagagggaacgcgagcgggag
agggaacgggaggagatagagtgcatcgaagtcagggaaaatcctgatcacgtgacaaac
gtttga
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