Gambusia affinis (western mosquitofish): 122825190
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Entry
122825190 CDS
T07758
Symbol
lamp1a
Name
(RefSeq) lysosome-associated membrane glycoprotein 1a
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03272
Virion - Hepatitis viruses
gaf03273
Virion - Lassa virus and SFTS virus
gaf04140
Autophagy - animal
gaf04142
Lysosome
gaf04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
122825190 (lamp1a)
03272 Virion - Hepatitis viruses
122825190 (lamp1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122825190 (lamp1a)
04142 Lysosome
122825190 (lamp1a)
04140 Autophagy - animal
122825190 (lamp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122825190 (lamp1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gaf04147
]
122825190 (lamp1a)
04090 CD molecules [BR:
gaf04090
]
122825190 (lamp1a)
Membrane trafficking [BR:
gaf04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
122825190 (lamp1a)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
122825190 (lamp1a)
Other autophagy associated proteins
RNautophagy/DNautophagy
122825190 (lamp1a)
Exosome [BR:
gaf04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
122825190 (lamp1a)
CD molecules [BR:
gaf04090
]
Proteins
122825190 (lamp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
VAS1_LD
DEC-1_N
Motif
Other DBs
NCBI-GeneID:
122825190
NCBI-ProteinID:
XP_043962315
LinkDB
All DBs
Position
LG02:complement(20503447..20508650)
Genome browser
AA seq
423 aa
AA seq
DB search
MGSTSKMKVLESLAPLFIVCLGILGCTRAVSLEVKEGNSTCIKADLSALLFITYTTFNST
SNVSTSLPDSTSVDAASSSCGAAGRPPWLVAVFRSGHALGLSFATNGSFYSVTNLTLQYN
LSDTSLFPQSNGSGIVTVVSSSVGIWAPLNITYRCASPTTIRAGGAAVTFSAMRLEAYMP
GNDLSPAESVCAADQTTTTTAPPTPTTTAAPAPTPAPTPPGAPKTGVFSVTNSSGTVCLL
AKMGLQLNVSYVSQSQNKTVQELVNVNPNLTITSGSCGGTTASLVLTQQTTTLNFTFSMN
STTSKYHLSGINLLANWSDMTAPFSASNTSLDYLRSTLGRSYMCNTEQTLLVAPAFSLNT
FRLQVQPFGVKASQFAAAEECQLDQDQMLIPIIVGAALAGLVLIILIAYLIGRKRSHAGY
QTI
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgggctcgacttctaagatgaaagtcctggagagcttagccccgcttttcatcgtctgt
ctgggaattttaggttgcactcgggcagtcagtcttgaggtgaaggaagggaactctacc
tgcatcaaagccgatctgtctgcattactcttcatcacatacaccaccttcaacagcacg
agtaatgtttccacctcgctgcctgactccacctcagtcgatgcagcaagtagctcgtgt
ggagcagcaggccgcccgccgtggctggtggcggtgtttagatcgggtcacgcgctcggc
ctcagcttcgccaccaatgggagtttttatagcgtcactaacctgacgctccagtacaac
ctgagcgacacttcgctgttccctcagtccaacggctctggcatagtgactgtggtgagt
tcctcggttgggatctgggctcccctcaacatcacctaccgctgtgcgagccccaccacc
atcagagcgggaggagctgccgtcaccttctctgctatgaggctggaggcatacatgcca
ggaaatgacctcagcccagcagaaagtgtgtgtgcagcagatcaaacaaccaccaccaca
gcgccccctactccaactacaacagcggctccagcaccaactccagcaccaactccacca
ggagcgcccaagaccggagtgttctctgtgacgaacagcagcggtaccgtttgtctcctc
gccaaaatgggtctgcagctcaacgtctcctacgtctctcagtctcaaaataagactgtt
caggaattggtcaacgtgaaccccaatctgacgataacatcaggatcatgtggaggcacc
actgccagcttagttttgacacaacagaccaccacacttaattttaccttctccatgaac
tcaacaactagcaagtaccatctgagtggaataaatctgttggccaactggtccgacatg
actgctcctttctcagccagtaacaccagtttggactacctccggagcacactgggacgc
tcctacatgtgcaacacggagcagactctgctcgtggccccagctttctctctcaacaca
ttcagactgcaggtgcagccgtttggagtcaaagccagccagtttgcagcagcggaggaa
tgccagttggaccaggaccagatgttgatccccatcatcgttggagcagcactggctggt
ctggtgctgatcatcctcatcgcgtatctaataggcaggaagaggagccatgctgggtac
cagaccatctga
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integrated database retrieval system
