KEGG   Gambusia affinis (western mosquitofish): 122825241
Entry
122825241         CDS       T07758                                 
Name
(RefSeq) PH-interacting protein isoform X1
  KO
K11797  PH-interacting protein
Organism
gaf  Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gaf04121]
    122825241
Ubiquitin system [BR:gaf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     122825241
SSDB
Motif
Pfam: WD40 WD40_Prp19 Bromodomain WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_EML WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_SCAP WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_HPS5
Other DBs
NCBI-GeneID: 122825241
NCBI-ProteinID: XP_043962422
LinkDB
Position
LG22:16904949..16947354
AA seq 1832 aa
MASDSTHIAQLTSELYFLIARFLEAGPCQKAAETLIREVEEKELLPRRLDWTGQEHPGTY
KNLVKLYRHVAPDHLLQVCSRVCPLLEREVPASVPGLTSLLGAGRQNLLRTSNSCKHVVW
KGSALAALHCGRPPEPPIIYGSPPNIVETSHSRRLNGSYRLRQLVPTAVYQHMKMHKRIL
GHLSSVYCVTFDRTGRRIFTGSDDCLVKIWGTDHGRLLATLRGHAAEISDMTVSYENTMI
AAGSCDKTIRVWCLQTCAPLAVLEGHAASITSLQFSPLCSGSKRYLSSTGADGTICFWQW
DARTLKFGQRPSKFTERSRPGVQMICSSFSAGGMFLATGSTDHIIRVYYFGSGQPEKISE
LESHTDKVDSIQFSHCSDRFVSGSRDGTARIWQLQPQGWKSILLDMQTKLPGKYNPPPLE
DKVTKLKVTMVAWDRHDSTVITAANNLTLKVWNSITGNLVHVLMGHEDEVFVLEPHPFDP
RILFSAGHDGNCIVWDLARGVKIRSYFNMIEGQGHGALFDCKCSPDGQHFAATDSHGHLL
IFGFGSSGKYDKIADQMFFHTDYRPLIRDANNYVLDEQTQQAPHLMPPPFLVDVDGNPHP
PRYQRLVPGREGCRDEQLIPQMGVTSSGLNQVVSEQAVDGPSPLDTMIQRLQQEQDQRMG
GTDAGASGANTRASRGSVGSPTEVHSPPNVGLRRSGQIEGVRQMHSNAPRSQMATEGDLV
AWSRRVLVPELEDASVRKQVTWREAKGDEEINIYQSERRRRTIHSLPKESRVHPTSECVV
DEGRKSQGNHGYHTRAAMEETSRQSAEAADDDDSTSEAEVEVRQINGYSSEDEKNEEEKE
PWPDEHSSSSDYSSDYSDWTADAGINLEPPKKSVKVKKKNSGSEEDSDKKREGKKEKKKE
KADKDGALPKKKKPKEKRKRNEFQEQGLTLEEWLPSAWITDTVPRRCPYIPQMGDEVYYF
QQGHEAYVEMAKQKKIFSINPKKQPWHKMELREQELMKIVGIKYEVGLPTLCCLKLAFLD
PDTGKLTGGSFSMKYHDMPDVIDFLVLRQQFDNARRRQWTIGDRFRSVIDDAWWFGTIES
QEPYQLQYPDSLFQCYNVCWDNGDTEKMSPWDMEPVPDDATFPDELGTSVPLTEDEQKDL
LYVPQDGEWGCRTRAEECERIIKAIDQLCTLDVAAPFAFPVDLQAYPTYCTVVAYVTDLS
TIRERLVNRFYRRLSSLMWEVRYIEHNAQTFNEPGSFIVTTAKFVSDLMLAFVKDQSLTD
LKPLYKTMKKATFSDSEDEDEEEDDEDNNAPGTSTRNHKGRQPMQRQLRNRPRSYDPHAW
KGRCKELLDLIFQCEDSEPFREPVDLQEYPDYLQIVDSPMDFGTVLKKLTEGNYPSPIEL
CKDVRLIFSNSKAYTPSKKSRIYSMSLRLSALFEEHISPILSDYKAIHGMTDKLTRRGTD
RQTRHAADRQTRHTTKRRRSESPTSSNASSPERKRRVSSRVTAKKEPSPAPSRPPSLRQH
VPLKQTPQLVNGKADTPAPGRTRSSARHFAHSSPPSSSNITNSTPSTGESSRSLRAHNSV
RASTPPVPEKVTPPPAADSSGGSTRRKLRMPVRHTLGSPSSPSTQSTAHLNGHSGHMTLG
MGRRRRRSRIDSPVSPPEVPTPASPSRPRGRPPGKKKGRKSKQEQDELRQSGSRRSSTPD
DELDHSTGDEGGTSSAPETSAPSDSGAAPTPRRRGRPRIVKTKESTSPAESPEPSPLRRS
SRRTNEEAMPHPQTSSERSGRKESPKGEAGDGTMGSMRTRNQGRRSAWYMEEDSEEEQRQ
LLFEDSSITFGTSSKGRVRKLTEKAKANLIGW
NT seq 5499 nt   +upstreamnt  +downstreamnt
atggcttcagacagtacacacatcgcgcagttgacttctgaactgtacttcctaatagcc
cggtttctagaggctggaccgtgccagaaagctgccgagaccctgataagggaggtggag
gagaaggagctgctacccagaaggctggactggacagggcaggagcaccccgggacgtac
aaaaatttggtgaagctgtacagacacgtcgctccagaccacctgctgcaggtttgctcc
agagtttgtccgctgctggagagggaggtccccgccagcgtgccgggactcaccagcctg
ctgggggccggcaggcagaacctcctgcgcaccagcaacagctgcaaacatgttgtgtgg
aaaggttcggcgttggcagcactacactgtggaagacccccggagccacctattatttat
gggagtccacccaatattgtggagacgagccacagccgtcgactgaacggctcctaccgc
ctccgtcagctggtgcccacagccgtctaccagcacatgaagatgcacaagaggatcctg
ggacacctgtcgtctgtgtactgcgtaactttcgaccggacgggtcgccgcatcttcaca
ggctcagacgactgcctggtgaagatctggggaaccgaccacgggcgtctgctggcgacc
ctgcgcggtcacgctgctgagatctccgacatgaccgtgagctacgagaacacaatgatc
gctgccgggtcctgcgataagaccatcagagtgtggtgcttacaaacctgcgcacctttg
gccgtcctggaggggcacgcagcctccatcacctccctacagttttcgcctctctgtagc
ggctcgaagcgctacctgtcctccaccggagctgacgggaccatctgcttctggcagtgg
gacgctcgcacgctcaaatttggccaaagacccagtaaattcacggagcgctccagacct
ggcgtccagatgatctgctcctccttcagcgcaggcgggatgttcctcgcaacaggaagc
accgatcacatcatcagggtgtactactttgggtcgggtcaaccagagaagatctctgag
ctggagtcccacacagataaagttgacagcatccagttctctcactgcagtgacaggttt
gtgagtggcagtagagatggtacggctcggatctggcagctgcagcctcagggctggaag
agcattctgctggatatgcagaccaaactgcctgggaaatacaaccctcctccactggaa
gacaaggtcactaagcttaaggttaccatggtggcgtgggatcgccatgacagcaccgtg
atcaccgccgccaataatctgacgctgaaggtgtggaactccatcaccgggaatctggtc
catgtcctgatgggtcatgaggatgaggtgtttgtcctcgagcctcatccgtttgatccg
aggatccttttctcagccgggcacgacgggaactgcatcgtttgggatctggcgagagga
gtcaagatccgctcttatttcaacatgattgaaggccagggacacggagcattgtttgac
tgtaaatgtagtcctgacgggcagcacttcgccgccaccgactcccacggtcacctgctc
atctttggctttggctccagcggcaaatacgacaagattgccgaccagatgtttttccac
accgattaccggcctctgatccgggacgccaacaactacgtcctggacgagcagacccag
caggcgccgcacctgatgcccccgcccttcctggtggacgtggacgggaacccccacccg
cccaggtaccagcggctggtgccgggccgggagggctgccgggatgagcagctcatccct
cagatgggggtcacttcctccggcctgaaccaagtggtgagcgagcaggcggtggacggg
cccagtccgctggacaccatgatccagaggctgcagcaggagcaggaccaaaggatggga
ggcaccgacgccggagcgtctggagcgaacaccagggccagcagaggttccgttggttct
cccactgaggtccactcccctccaaacgtcggtctccggcgcagcggccagatcgagggc
gtccgccagatgcacagcaacgccccgcgcagccagatggccacggagggcgacctggtg
gcctggagccgccgggtgctggtccctgagctggaggacgcctccgtcaggaaacaagtg
acgtggcgcgaggctaaaggcgacgaggagatcaatatttatcagtcggaaaggaggaga
cgcacgatccactcgctccccaaggagagcagggttcacccgacgtcagagtgcgtggta
gacgaggggaggaagagtcaaggtaaccacggctaccacactcgcgccgccatggaggag
acgagccggcagagcgcagaggctgctgatgacgacgacagcacctcagaggcggaggtg
gaggtgcgtcaaattaacggatactcctcagaggatgaaaagaacgaagaggagaaggag
ccgtggccagacgagcacagcagctccagcgattactccagcgattactctgactggacg
gcagacgccggcatcaacctggagccgcccaagaagagcgtgaaagtgaagaagaaaaac
agcggctccgaggaggacagcgacaagaaaagggaggggaagaaggagaagaagaaagag
aaagcagacaaagacggcgcattaccaaagaagaagaaaccaaaggagaagaggaagagg
aatgaatttcaggagcaagggctcaccttggaggaatggcttccctctgcctggatcaca
gacacggttccccgcagatgtccttacattcctcagatgggagacgaggtgtactacttc
cagcagggtcatgaagcttacgtcgaaatggccaaacaaaaaaagattttcagcatcaac
cctaagaaacagccctggcacaagatggagctgcgggagcaggaattgatgaagatagtt
ggcatcaaatatgaggtgggtctgcccacactctgctgcctgaagctggcctttctggat
cctgacacagggaagctgacaggaggctccttctccatgaagtaccatgacatgcctgac
gttattgacttcctggtgttgcggcagcagttcgacaacgctaggaggaggcagtggact
ataggcgacaggtttcggtcagtgatcgacgacgcctggtggttcggcaccattgagagt
caggagccctaccagctccagtatcccgacagcttgttccagtgctacaacgtctgctgg
gataacggtgacacagagaagatgagcccgtgggacatggaacccgtccccgacgacgcc
acgtttcccgatgagctgggcacgagcgtccctctgacagaagacgagcagaaagatctg
ctgtacgtcccgcaggatggtgaatggggctgccgcacgcgagccgaggagtgcgaacgc
atcatcaaagccatcgaccaactctgcacgctcgacgtggcagcaccgtttgccttcccg
gtagatctacaggcgtacccgacgtactgcacggtcgtggcctacgtcaccgatctcagc
accatacgtgaaaggctggtgaaccgcttctacaggcgcctttcctctttaatgtgggag
gttcgttatatagaacacaacgcccagacgttcaacgagccgggatcgttcatcgtcacg
accgccaagtttgtctctgacctcatgctggcgttcgttaaggaccaaagtctcacggat
ctcaagcctctgtacaaaaccatgaagaaggccaccttctctgactctgaagatgaggat
gaagaggaggatgatgaggacaataatgctccaggaacatcaacccgaaaccataagggc
cgtcagcccatgcagcgccagctacggaaccgtcctcgttcttacgaccctcatgcttgg
aaaggacgctgcaaggagctgctggaccttatctttcagtgtgaagactctgagcccttt
agagaacccgtggacctacaggagtacccggactacctgcaaatagtcgactctccgatg
gactttggcacagttctgaaaaagctgactgaaggaaattatccatctcccattgagctt
tgcaaggatgtcagactcattttcagcaattccaaagcgtacacacccagtaaaaagtcc
cggatatacagcatgagtcttcggctttctgcgctgtttgaggagcatatcagccccatc
ctttctgattacaaagcaatccacggcatgacagataaattgaccagacgagggacagac
agacagacgcgtcacgctgcagacagacagacacggcacacaacaaagagaaggaggagc
gaatcacccacaagcagcaatgcatccagcccagagaggaaaagacgcgtatcatccagg
gtgaccgccaagaaggagccatcgccagctccgtcccgtccgccatccctcagacagcat
gtccctctgaaacagactccacagctggtcaacggtaaagcggataccccagctccggga
cggacgcgtagttccgcacgccactttgcacactcatcacctccttcatcgagtaatatc
actaacagcacaccgagcacaggagaatcttctcgctcactgcgggctcataattctgtc
cgagcttcaacgccaccagttcctgaaaaggtcacgccccctccagcagcagacagtagc
ggtggaagcactcgtcggaagctcaggatgcccgtgcgacacacactcggttctccttcc
agcccctcgactcaaagtacggcccatctgaacggacacagcggtcacatgaccttaggc
atgggaagaaggaggcgaaggtccagaatagactcaccggtgagtcctccagaagttccg
actccagccagcccctcaagaccccggggtcgaccacctggcaagaagaaaggcagaaag
agcaagcaggaacaagatgagttgagacagagtgggagtcgccggagctccactccggat
gacgagctggaccactccacaggggacgaaggcggcacgtcgtccgccccggaaacgtca
gcaccgtcagactctggcgcggcgccgacacctaggcgacgaggccgaccgcggatagta
aaaacgaaggaatcgacttctccagccgagtcgcctgagccctcaccgctgagaaggagc
agcaggagaaccaatgaagaggccatgcctcatccccagacttcctccgagcgatcgggt
cggaaagagtctccaaagggcgaggctggggatgggacgatggggtcgatgcgcacacgt
aaccaaggaaggcggtccgcctggtacatggaagaggactcagaggaggaacagaggcag
ttgctgtttgaggactcgtcaatcacctttgggacgtcctctaaggggcgcgtccgcaaa
ctgacagaaaaggccaaagccaatctcataggctggtaa

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