Gambusia affinis (western mosquitofish): 122825309
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Entry
122825309 CDS
T07758
Name
(RefSeq) transcription factor IIIB 90 kDa subunit-like isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaf03021
]
122825309
Transcription machinery [BR:
gaf03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
122825309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
RB_B
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
122825309
NCBI-ProteinID:
XP_043962566
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All DBs
Position
LG22:176812..197987
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AA seq
706 aa
AA seq
DB search
MSSRVCRTCGGSDIDVDQARGSAVCTGCGSVLEDNIIVSEVQFVEGSGGVSSAVGQFVSA
DGPVKAPLLGSGFHTGVGKESRAQTLQNGKRQIQQLGSQLQLNQHCLDTAFNFFKLVVSK
HLTRGRRTEHVIAACLYLVCRTEGTPHMLLDLSDLLQVRATWEQPAAASLSSGPITERLC
VQVNVYILGKTFLLLARELCINAPAIDPCLYIPRFAHMLEFGDKNHEVSMTALRLVQRMK
RDWMHTGRRPSGLCGAALLVAARMHKFRRSVKDVIGVVKVCQTTLRKRLTEFEDTPTSQL
TIDEFMRVDLEQECDPPSFTAGQHKVKMQQLEQELARKLDEVEGEISCYKEEIETELEKS
RPKLRGIYAAYAKEMDPEDDDVLSSPVDPEDKEGDDAALQAAAQRLTQDFLRRVIQEEEG
GGAPQEAETEGAGRPAQGAPLASILGNASLGLQESFHTFDLPEPDQNPDEDPSPSGELDL
EGIDDQEIDKYILNEKEVEVKTELWTKQNADYLKEQKEKEERISKEKEQGTYKEKKKKYK
KREQIEAATAGEAIEKMLERKKISSKINYDVLKDLNQPAGSPASEPPGGAAIVSRKRLSR
RRRKASDANAELSASATVMTKRFRRLISSTPRKKKAAPQVETAVVMETASEAVHEAPPAA
VPDAGPAPTEAPPPGETEEEEEEAEEDCVSALQLVGDYGCEEEEVF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgagttccagggtgtgccggacctgtggggggtccgacatcgatgtggaccaggcccgg
ggcagcgcagtgtgcacgggctgcggctcggttctggaggacaacatcattgtgtcagag
gtccagttcgtggaaggaagtggaggcgtgtcgtctgctgtgggacagtttgtctctgct
gatggtccagttaaagctccactcctcggttctggtttccacaccggcgtcggaaaggag
tccagagcccagacgctgcagaacggtaagcgtcagatccagcagctgggcagccagctg
cagctcaaccagcactgcctggacacggccttcaacttcttcaagctggtcgtcagcaaa
cacctgaccagaggccggcggacggagcacgtcatcgccgcctgcctctacctggtgtgc
cgcaccgaaggcacgccccacatgctactggacctgagcgacctgctgcaggtaagagca
acatgggagcagccagctgcagcgtctctgagctctggaccaatcacagagcgtctctgt
gtccaggtgaacgtctacatcctggggaagaccttcctgctgttggcccgggagctgtgc
atcaacgcgcccgccatcgacccgtgcctgtacatccctcgcttcgctcacatgctggag
tttggagacaagaaccacgaggtttccatgacggcgctccgcctggtgcagaggatgaag
agggactggatgcacacgggtcgtcgcccgtccgggctctgtggagcagctctcctggta
gcggctcggatgcacaagtttcggcgctcggtgaaggacgtgatcggcgtggtgaaggtg
tgccagaccactctgaggaagaggctaacagagtttgaggacacgcccaccagtcagctg
accatcgatgagttcatgcgggtggatctggagcaggaatgtgatccgccgtccttcact
gccggccagcacaaagtcaagatgcagcagctggagcaggaactggcccggaagctggac
gaggtcgaaggagaaatcagctgctacaaggaggagattgagacggagctggaaaagagc
cggcccaaactcagggggatctacgccgcctacgccaaggaaatggatccagaggatgac
gacgtcctgtcctctccggtcgacccggaggacaaggagggggacgacgccgccctgcag
gccgccgcccagcggctgacgcaggacttcctgcgtcgggtgatccaggaggaggagggg
ggcggggcgccacaggaagcggaaacggagggagccgggcgacccgcccagggcgcccct
ttggcctccatcctgggaaatgccagcctgggcctccaggagagctttcacaccttcgat
ctgccagaaccggaccagaacccagacgaggatccgtctccgagcggagagctggacctg
gaaggaatcgatgatcaggagatcgataagtacatcctgaacgagaaggaggtggaggtg
aagacggagctttggaccaagcagaacgcagattacctgaaggagcagaaggagaaggaa
gagaggatctccaaggagaaggagcagggcacctacaaggagaagaagaagaaatacaag
aagcgtgagcagatcgaggcggccacggcgggcgaggccatcgagaagatgctagagagg
aagaagatctccagtaagatcaactacgacgtcctgaaagacctgaaccaaccggcagga
agtccagcctccgagcccccagggggcgccgccatcgtctcacgcaaacgcctgagccgc
cgccgcaggaaggccagcgacgccaacgcagaactgtccgccagcgccaccgtaatgacc
aagaggttcaggcgcctcatttcctccacacctcggaaaaagaaagccgctccgcaggtg
gaaacagcagttgtcatggaaacggcatcggaggctgtacatgaagctcctcctgcagct
gttccagacgcaggccccgcccccaccgaagccccgcccccgggggaaacggaggaagag
gaagaggaggcagaggaagactgcgtcagcgcactgcagctggtcggagattacggctgt
gaggaagaggaagtgttctag
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