Gambusia affinis (western mosquitofish): 122825365
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Entry
122825365 CDS
T07758
Symbol
hnrnpub
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein Ub
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122825365 (hnrnpub)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gaf03041
]
122825365 (hnrnpub)
Spliceosome [BR:
gaf03041
]
Common components
Common spliceosomal components
hnRNP proteins
122825365 (hnrnpub)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
AAA_17
CPT
AAA_22
Zeta_toxin
AAA
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
122825365
NCBI-ProteinID:
XP_043962683
LinkDB
All DBs
Position
LG22:complement(19546095..19558280)
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AA seq
829 aa
AA seq
DB search
MSTINVKKLKVNELKDELKKRNLSDKGLKAELMDRLQAALDEEALAGDTSAAQEDSVDDG
FDQSVDQEGMGEEEEGEGEGPVEESMEANEEEAENEDDGNGVAEDEEMGEGEDGGDGDGD
GDGDGDGDGDGDEDDEMDPMLKADVDDMEKIEDGEPGDNAAEGDADKDTNADQKNKKGVK
RRREEHGRGYFEFIEENKYSCASFKSPVPPLEEEDEECDETKVCLDTYNCDLHFKVSRDR
YSASSLIMESFAYLWSGGKGTYGVNSGKACFEMKLTEKISVKHISSKNLEIHDVQVGWSL
STGTLLLGEEEFSYGYSCKGKKTTNCVTEDFGETYEENDVICCLIDFEGEEVVLSFAKNG
GEPAVAFRVRKDCLNGQALFPHVICRNCAVEFNFGQMETPYFPTPEGYTFLQQIPVSERV
RGLKGPQTKADCEIIVMVGLPGSGKTTWVKNQVQQNPGKYYILSSDTIVDKMMINSLKRQ
SKDITKLSAISQRAPLFLGKFIEIAARKKRNYILDHTNLSAPGQKRKMCLFAGFQRKAVV
VFPTEEEYKTRVQKKVESDGKEVPEHALLKMKGFYALPEEGESFSEVTYAELPKDDAAKL
LEQYKEESKTALPAEKKPNQGSTTPKRGGSGGGGPRGSGRGGKNQFGRSGQGQRGGGGRG
GFQNRGNFRGGPGPRGGFNRPPRGFLPPPAFRGGFPRPGSFGRGGGPIPSLAGSPRGGPM
RGGMGLRGGPMNRGGQMNRGGQMSRGGQMNRGGGNMNRNANRGPPAHFQQRGGGRGNFGQ
KNSNYGNNRNSGGFGNRNGMDKAQAFNQSWQQGFWNQKPWSQQYQPGYY
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccattaacgtgaagaagctcaaagttaacgagctgaaggacgagctgaaaaaa
cgaaatctctcggacaaggggctgaaggccgagctgatggatcgcctgcaggccgcgttg
gacgaagaggccctcgccggggacacctcggcggctcaggaagactcggtagatgatggg
ttcgaccagtctgttgaccaagagggaatgggagaagaagaggaaggcgaaggcgaaggc
ccagtagaggagagcatggaagccaacgaggaagaagcagagaatgaggacgacggcaac
ggcgtcgccgaggacgaagaaatgggtgagggagaagacggaggggacggggacggagac
ggagacggagacggggacggagacggggacggggacgaggacgatgaaatggatcccatg
cttaaggcggatgtggacgacatggaaaaaattgaagatggtgagcccggagacaacgct
gcagagggggatgcggacaaagacacgaatgctgatcagaagaataagaagggtgttaag
agacgccgggaggaacatggaaggggctactttgagtttattgaagagaacaaatacagc
tgcgcctcttttaagtctcccgtgccaccgctggaggaagaggacgaagagtgtgatgag
accaaagtctgcttggacacctataactgtgacctgcactttaaggtgtccagagaccgc
tacagcgcttcgtcgctcatcatggagagctttgcttatctgtggtctggaggaaaggga
acctatggggtgaactctggcaaagcttgctttgagatgaagctcacagagaagatttca
gtgaaacacatttccagcaagaacttggaaatccatgatgtgcaggttggatggtccttg
tcaactgggacgctgctgctgggtgaggaagagttttcctatggttactcctgcaaaggg
aagaagaccaccaactgtgtgactgaagactttggggaaacatatgaggagaatgatgtc
atctgctgcctcattgactttgagggcgaggaggtggtcctgtccttcgccaagaacggt
ggggaaccagccgtcgctttcagggtccgcaaggactgcttaaacggccaggcccttttc
ccacatgtcatctgtcgcaactgcgctgtggagtttaactttggccagatggagacgcca
tacttcccaacgccagagggctacaccttcctgcagcaaatccccgtcagcgagcgagtg
agggggctgaagggaccccagactaaggccgactgtgagatcatcgtgatggttggtctg
cctggctctggcaaaactacatgggtcaagaaccaagtccagcagaaccctgggaagtac
tacatcctgagcagtgacaccattgtggacaagatgatgatcaacagcttgaaacgccag
tccaaggatatcaccaagctgagcgccatttcccaaagagctccactgttcctgggcaaa
tttatcgagatcgctgctcgcaagaagaggaactacattctggatcatactaacttatct
gcaccgggccagaagaggaagatgtgtctgtttgctggcttccagcgtaaggctgtggtc
gtcttccccacagaggaggaatacaagacgagggtccagaagaaggttgagagtgatggc
aaggaagtgcctgagcatgcgctgctcaaaatgaaagggttctacgccctgccggaagaa
ggggagagcttcagcgaggtgacgtatgccgagctgccaaaggacgacgccgccaagctg
ctggagcagtacaaagaggagagcaagacggctctgcccgctgagaagaaacccaaccag
gggagcacgactccgaaaagaggcggcagcggaggaggcggccctcgcggcagcggccgg
ggaggcaagaatcagtttggccgcagcggacagggacaaaggggcggtggcggacgtgga
ggcttccagaacagaggcaacttcagaggaggtcccggcccacgcggcggcttcaaccgt
cctcctcgcggctttctacctccaccagccttcaggggcggcttcccccggcctggcagc
tttggccggggcggcggccccatccccagcctggctggatccccaagaggcggacccatg
aggggcggcatgggactccgaggagggcccatgaaccgcggaggtcaaatgaacagagga
ggtcaaatgagccgagggggtcagatgaacagaggtggaggcaacatgaaccgcaacgcc
aacagggggccccccgcccatttccagcagagaggaggaggccgtggaaactttgggcag
aagaacagcaactatggcaacaacaggaacagcgggggctttggcaacaggaacggcatg
gacaaggctcaggccttcaaccagagctggcagcaagggttctggaaccagaaaccttgg
agccagcagtaccagcctggatattactaa
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