Gambusia affinis (western mosquitofish): 122825387
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Entry
122825387 CDS
T07758
Symbol
hmbox1b
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122825387 (hmbox1b)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
122825387 (hmbox1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
DUF494
HTH_37
AbiJ_NTD3
HTH_31
NOC3p
Motif
Other DBs
NCBI-GeneID:
122825387
NCBI-ProteinID:
XP_043962728
LinkDB
All DBs
Position
LG22:complement(19959287..19979620)
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AA seq
503 aa
AA seq
DB search
MSDFSEEPRFTIEQIDLLQRLRRTGMTKQEILHALDTLDRLDREHGDKFCRRTSSSSSTY
LVGGANSSAAKTTATSFNNNATASATTTTTSSSSATCNGGEGGDHSSSSSSLVVVAAAVA
SSTTSKISTATQTQFNNSGGGLSPSPSNSYDTSPPSAVLPSPVALVALSQNGRDSLAATP
NGKLSPPRYPVNSAAASRAFGFETAEEDLDVDDKVEELMRRDSSLVKEEIKAFLGNRRIS
QAVVAQVTGISQSRISHWLLQHGSDLSEQKKRAFYRWYILEKTTPGATLNMRPAPLPLEE
MEWRQTPPPLATAPGTFRLRRGSRFTWRKECLAVMESYFNDNQYPDEAKREEIANACNAV
IQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEATILESHGIDVQSPGGHSNSDDI
DGNDFAEQACDLPYFDKRPLSRPFGLYRLEPTSPTQDDSAAHNEHQDPISLAVEMAAVNH
TILALSRTGGVPNDIKTESLEDE
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacttcagtgaggagccgcgcttcaccatcgagcagatagacctgctgcagcgg
ctgcgtcgcaccggcatgacgaagcaggagatcctgcacgcgctcgacactctggaccgg
ctggaccgggagcacggcgacaagttctgccgccgcacctcttcctcctcgtccacctac
ctcgtaggcggggccaacagctccgctgccaaaacaaccgccacatccttcaacaataac
gccactgcctcggcaacaaccaccaccacctcctcctcctcggcgacgtgcaacggcggc
gaaggcggcgaccactcctcctcctcctcctccctcgtcgtggtcgccgccgccgtcgcc
tcgtccaccacctccaaaatctccacggccacgcaaacgcagttcaacaacagcggcggg
gggctgtccccgtcgcccagcaacagctacgacacgtccccgccctcggccgtgctgccg
tcgcccgtggcgctggtggcgctgtcgcagaacggacgggacagcctggccgccacgccc
aacgggaagctgtccccgcctcgctacccggtgaacagcgcggcggcgtccagggcgttc
ggcttcgaaaccgcagaggaagacttggacgtggacgacaaggtggaggagctgatgaga
cgggacagcagtctggtcaaagaggagatcaaagctttcctggggaaccggaggatttct
caggctgtcgtggctcaagtgaccggcatcagtcagagcaggatctcccattggctgctg
cagcacggctccgacctgagcgagcagaagaagagggctttctaccgctggtacatcctg
gagaaaaccacgccaggtgccactctgaacatgcggccagcaccgctgcctctggaggag
atggagtggaggcaaaccccgccgcccctcgccaccgcccccgggaccttccgactgcgt
cggggaagccgcttcacctggaggaaggagtgcctggctgtgatggagagctacttcaat
gacaaccagtacccagatgaagccaaaagagaggagatagccaacgcctgcaatgctgtt
attcagaaaccagggaagaagctgtctgatctggagagggtgacctccctgaaagtctac
aactggttcgctaaccggcgcaaggagatcaagagacgagctaatatcgaagcaacaatc
ctggagagtcatgggatagacgttcagagtccaggtggacactccaacagcgacgacatc
gatgggaatgactttgcagagcaggcctgcgacctgccctacttcgacaagagacctctc
agccgaccgtttggcctttaccgcctggagcccacctcacctacacaggacgacagtgca
gctcacaacgagcatcaggaccccatctctctggccgtggagatggccgccgtcaaccac
accatcttggcgctgtccagaaccggaggcgtgcccaacgacatcaagaccgagtccctg
gaggatgaatga
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integrated database retrieval system
