Gambusia affinis (western mosquitofish): 122825500
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Entry
122825500 CDS
T07758
Symbol
esr1
Name
(RefSeq) estrogen receptor
KO
K08550
estrogen receptor alpha
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
122825500 (esr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122825500 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gaf03310
]
122825500 (esr1)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
122825500 (esr1)
Nuclear receptors [BR:
gaf03310
]
3. Estrogen like
3A. Estrogen receptor
122825500 (esr1)
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GFIT
Motif
Pfam:
Oest_recep
zf-C4
Hormone_recep
DUF7234
Motif
Other DBs
NCBI-GeneID:
122825500
NCBI-ProteinID:
XP_043962869
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Position
LG22:complement(9675127..9688719)
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AA seq
621 aa
AA seq
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MYKRQNPVQSKQEFGPALRPRISPASSELETLSSTRLPPSPRAPLSDMYPEESRGSGGVA
AVDFLEGTYDYATPTPAPTPLYSHSTTGYFSAPLDAQGPPSDGSLHSLGSGPTSPLVFVP
TSPRLSPFMHAPSHHYLETASTPAYRSSHQPASREDQCDTRDEACSVGELGAGVGAGTAA
GGFEMPKETRFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDRNR
RKSCQACRLRKCYEVGMMKGGVRKERGRVLQRDKRQTGVSDREKTGKGLEHKVAPHHDKR
RRSSALGGARSSVTSLPSDQVLLLLQGAEPPILCSRQKLSRPYTEVTMMTLLTSMADKEL
VHMIAWAKKLPGFLQLSLHDQVLLLESSWLEVLMIGLIWRSIHCPGKLIFAQDLILDRNE
GDCVEGMAEIFDMLLATASRFRMLKLKPEEFVCLKAIILLNSGAFSFCTGTMEPLHDSAA
VQNILDTITDALIHHISQSGYSAQQQARRQAQLLLLLSHIRHMSNKGMEHLYSMKCKNKV
PLYDLLLEMLDAHRHHPVKPSQPSSPDDKAPPSTSGVCLGGSSPVGSGSGPRGGSETLIR
TPSAPSVLQYGGSRSDCTQVL
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtataagaggcagaacccggtgcagagcaagcaggagttcggaccagcactcagaccc
aggataagcccagcctcctcagagctggagaccctctcctcgacacgtctcccaccctca
ccccgtgcccccctcagtgacatgtaccctgaagagagccggggctctggaggggtagct
gctgttgacttcctggaagggacatacgactatgccacccccacccctgccccaacgcct
ctttacagccactctaccactggctatttctctgctcctctggacgcccagggaccacca
tctgatggcagccttcactctctggggagtgggccgaccagtcctcttgtgtttgtgccc
accagcccaaggctcagcccctttatgcatgctccaagccaccactatctggaaactgcc
tcaacaccagcttacagatccagtcaccagccggcctcccgagaggaccagtgcgacacc
cgtgacgaagcatgcagtgtgggagagctgggagctggagtcggagccggcaccgcagcc
ggggggtttgagatgcctaaagagacgcgtttctgtgctgtgtgcagcgactatgcctcc
gggtaccactatggggtgtggtcctgtgagggctgcaaggccttcttcaagaggagcatt
cagggtcacaatgactatatgtgcccagcaaccaatcagtgtactattgacaggaatagg
aggaagagctgccaggcttgccgactcaggaagtgttacgaagtgggtatgatgaaagga
ggtgtgcgaaaagagcgtggtcgtgttctgcagcgcgacaaacgacagactggcgtcagt
gacagagaaaaaactggaaaaggcctggagcacaaagtggcaccccatcacgataagagg
agacgcagcagtgccctgggaggagcgagatcctcagtgaccagcctgccatctgaccag
gttctgcttctccttcagggtgctgagcccccgattctgtgctcccgtcagaagctgagc
cgaccctatactgaggtcaccatgatgaccctgctgaccagtatggccgacaaggagcta
gtccacatgatcgcttgggcaaagaagctcccaggtttcttgcaactctccctccacgat
caggttctactgttggaaagttcatggctggaggtgctgatgattggactcatttggagg
tcaatccactgccctggaaaactgatctttgcacaagacctaatactggacaggaatgaa
ggagactgtgttgaaggcatggcggagatcttcgacatgctgctggccaccgcttcccgc
ttccgcatgctcaaactcaaaccggaggaatttgtttgcctcaaagcgatcatcctgctc
aactctggtgcgttttctttctgcaccggaacgatggagcccctccacgacagcgcggcc
gtccagaatatcctggacaccatcacggatgcactcatacatcacatcagccaatcagga
tactcggctcagcagcaggcgagacggcaggcccagctgctcctgctgctctcccacatc
agacacatgagcaacaaaggcatggagcacctctacagcatgaaatgcaagaacaaagtg
cctctgtacgatctgctgctggagatgctcgatgcccaccgccaccacccggtcaaaccg
tctcagccttcatctccagatgacaaagctcctccctccaccagtggtgtgtgtttgggc
ggctcctctccagtcggttccggttccgggcctcgaggtggcagcgagaccctgatcaga
accccctcggctcccagcgtcctgcagtacggaggctcccgctccgactgcacccaggtc
ctgtga
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