Gambusia affinis (western mosquitofish): 122825641
Help
Entry
122825641 CDS
T07758
Symbol
sox11b
Name
(RefSeq) transcription factor SOX-11b
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122825641 (sox11b)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122825641 (sox11b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
NOA36
Autophagy_act_C
PPP4R2
RXT2_N
Motif
Other DBs
NCBI-GeneID:
122825641
NCBI-ProteinID:
XP_043963074
LinkDB
All DBs
Position
LG22:complement(1320647..1322819)
Genome browser
AA seq
371 aa
AA seq
DB search
MVQHREHPGAGITKESREATDTEEGELVAASACSAVPLKPDWCKTASGHIKRPMNAFMVW
SKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDTEKIPFIREAERLRLKHMADYPDYKYR
PKKKPKTEGCAFPAGKSTAQSPEKSTVRSVSKNPGAAKKLSKLKAGKTVAVSGRGGSHQP
DHRYRYMVSHSFKTVKREFTDDEEEDDDDDDDEDSEEEFKVEEEEEEEPSRFSLAKIPSE
PQFESSGRLFYSFKNITRQGGGASSYPASLSPASSSRSGSTSSCCGEDLDDLPAERADLA
LGFLGDPWASSCSAAAGNLSLSLVDKDLDSCGSEGSLGSHFEFPDYCTPELSEMIAGDWL
EANFSDLVFTY
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggtccagcacagggaacatcctggagcgggaatcaccaaggagtcccgcgaggcgacg
gacaccgaggagggtgagctggtggcggcttcggcctgcagcgccgtgccgctgaagccg
gactggtgtaaaacagcgtcgggtcacataaagcggcccatgaatgccttcatggtgtgg
tccaagatcgagcggaggaagatcatggagcaaagtccggacatgcacaacgcggagatc
tccaagcggctcgggaagcgctggaagatgttgaaggacacggagaagatcccgttcatc
cgggaggcggagcggctccgactcaagcacatggccgactacccggactataagtaccgg
cccaagaagaagcccaaaaccgagggctgcgcgtttccagctgggaagtcaaccgctcaa
tcccctgagaagagcaccgtgaggtcggtgagtaaaaaccccggagccgccaagaaactc
tccaaactgaaggccgggaagacggtggccgtgtccggccgcgggggcagccaccagccg
gaccaccggtaccggtacatggtgagccacagctttaaaaccgtcaaacgggagtttacc
gacgacgaggaagaggatgatgatgacgacgatgatgaagactctgaggaagagttcaaa
gtcgaggaggaagaggaggaggaaccgtcccggttcagcctggccaagatcccgtccgag
ccgcagttcgagtcctccggccggctcttctacagcttcaagaacatcacccggcagggc
ggcggggcctcctcctacccggcctccctctcccccgcttcctcctcccggtccggatcc
acgtcctcctgctgcggggaggacctggacgacctcccggcggagcgggccgatctggcg
ctgggcttcttgggcgacccctgggcctcctcctgcagcgccgccgccgggaacctcagc
ctgtccctggtggacaaagacctggactcctgcggcagcgagggcagcctcgggtcccac
ttcgagttcccggattattgcaccccggagctgagcgagatgatcgccggggactggctg
gaggccaacttctcggacctggtcttcacgtactga
DBGET
integrated database retrieval system
