Gambusia affinis (western mosquitofish): 122825661
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Entry
122825661 CDS
T07758
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM2-like
KO
K16847
T-lymphoma invasion and metastasis-inducing protein 2
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gaf04990
]
122825661
Domain-containing proteins not elsewhere classified [BR:
gaf04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
122825661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
Tiam_CC_Ex
RhoGEF
PH
PH_9
PDZ_6
PDZ
SOS1_NGEF_PH
HR1
PDZ_2
Motif
Other DBs
NCBI-GeneID:
122825661
NCBI-ProteinID:
XP_043963097
LinkDB
All DBs
Position
LG22:complement(1566531..1612242)
Genome browser
AA seq
1486 aa
AA seq
DB search
MSHVDDVIFQVAMGNTDSHSSFSSPVKPCGSLRSSTKKEEVTSARSWWRSSQGRSQGPRG
QGHWGQHASWQYESTPRGGAKQSVGSPQRFNQGDRMQDGRRSPFGFQGPNGDQASLQCGG
SPKVLLSKDGSMRVEFTNARVVPVEPQGPPPANLLPESSHRTSKGSSLSSEGSWYDSPWG
AAGELTDSVFVCGQSVDTSSGYNTCSSTQVEDVSPGFSSALLFPPAEGAKGHNSCSSGRT
EDSGIGDSVILQPDLHDLNLTSPSDFHSTHNALPAFPTSADSFLQQQLLPAVDNVIQEEA
PSVGGFEPRYFSHTLPNRKAEPVGAAFSGNNRKDFLKSRIRQLSDWTGSLSRKKRRIQEP
HSSDSSGVFINSLNAGAPWPSNPLLQSSQNQFLPADWDFPRSLDQNQSSDAQRQNVYRSF
MRELETGCGGAADRTEPLEDDDDAEEEMEEEAGGGDLDGLLEADQGAVRRAGWLYFKPLI
TVSKDRKLELVARRKWRRYWVTLKGCSLLFYATFGRSSGAEQDLSPHYALLADDSVVQAV
PEHPRREHVFCLSNSHGDVYMFQATNQTDLENWVTAIHSASAALLARRQGKEDTLRLLRC
QSRSLLHKIDMDGKMKKMAELQLSIIKDQKSRRAVESQIQQWEQNLEKLNLDLFRFRCYQ
SSLQGSELPNPKSLLAVASRPSKASLGRLGVFSASSFHALVCSREDGTLRRRCRSVSGGR
RRGLPSSLKVLPKPIQDGKLSDHQVLHRHVSAPSAQSVPAVCWSETVTCVSKQSEVLPSA
GHVAELQLSEERLPSAAGVFSLNVCRPNTNQDFGFAVTGHVDGAGKSHVFVSDVDPLGLS
ARGGLLAGDEVLAVNGSAVSGLDLDHLQTLFRHQNLRLLLRRDELPDAEEPTITWPDPAD
LWVKQSDLHTWTSDAAPPAGSDPSMPLTQESPEQNTDQVFSLYQTFPESKTSDVDVPRNP
YVREGSLHPPSPAHLSVCQRLRKVIQELVDTEKSYVKDLVCLFEIYLTPLQSETFLSKDE
MEALFGSLPEMLDFQRVFLQTLEERIASCPDFSSLETPEQFKMLLFSLGGSFLYYADHFK
LYSGFCANHIKVQKVLERAKTDAAFKHFLETKNPTNQHSSSLESYLIKPVQRVLKYPLLL
RELVSLTDTESSEHTHLTEALRAMEKVASHINEMQKIYEDYGCVFDQLAAEQSGADKQVT
EISMGEFLVHSPVVWLNPLPCLRRLRKEPHLTLFVFKRAVILVHRENKLKKRMTSSRSAD
LDPFRFRWLIPVSALQVRPANIPGSEDPCVWELVHSRSEVEGRPETVFQLCSSDLEAKAA
LLRALSSLLKEQAASGSLRRTRLSAAERSATWRRRPRPGRSDLQRTAPHPPAERCGAPEE
TCSEPPLPSHAGSSGMRPRLCSLTGELEAQLQRLNFSEEDQGAAQRLDEEERRTSSLRRG
AAGDGLDFSSSVGRDFSVQSMTSMINEDCFYDPVLAIQTDNSNLLT
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatgttgatgatgtcattttccaggttgccatgggaaacacagacagtcacagc
agcttcagctctccggtcaaaccctgcggctccctcaggtcctccaccaagaaggaagag
gtaacgtcggcccgtagctggtggcggagcagccagggccggagccagggcccccggggc
cagggccactggggccagcatgcctcctggcagtacgagtccacgcccagagggggcgcc
aaacagagcgtgggatcccctcagaggttcaaccaaggcgaccggatgcaggacggccgc
aggagtccgtttggattccaggggcctaacggtgatcaggcgtccctgcagtgtggcggc
agtcccaaggttctgctcagcaaagatggcagcatgagggtggagtttaccaacgccagg
gtggttcctgttgagccgcagggcccgccacccgccaacctcctcccggagtcgtcccac
cgcaccagcaagggcagctcgctgagctcagagggatcctggtacgactcgccgtggggc
gccgccggcgagctcaccgacagcgtgtttgtctgcgggcagagcgtcgacaccagcagc
ggctacaacacctgctcttccactcaggtggaggacgtctcacctgggtttagctccgcc
ctcctgttccctcctgcagagggcgccaaaggccacaacagctgctcctctggccgcact
gaggacagcggcatcggggactctgtcatccttcagcctgacctccacgacctcaacctg
acgtcaccgtcagacttccacagcacacacaacgcgcttccagcctttccaacgtcagcg
gactctttcctgcagcagcagctgctgccagccgtggacaacgtcatccaggaggaggcg
ccgtccgttggaggcttcgagccgcggtacttctctcacacgctgcccaatcgtaaagcc
gagcctgtgggcgccgccttctccgggaacaaccggaaagacttcctgaagagtcggatc
cgacagctgagcgactggacgggaagtttgagccgcaagaagaggcggatccaggagccg
cacagcagcgactcctccggcgtcttcatcaacagcctgaatgccggcgctccctggcct
tccaaccctctcctccagtcgagccagaaccagttccttccggccgactgggacttcccc
aggagcctggatcagaaccagagcagcgacgctcagcggcagaacgtgtacaggagcttc
atgcgggagctggagacgggctgcggcggcgcggccgaccggaccgagccgttggaggac
gacgacgacgcagaggaggagatggaggaggaggcgggaggaggagacctggacgggctg
ctggaggcggatcagggcgccgtgcggcgcgcggggtggctctactttaaaccgctcatc
accgtcagcaaggacaggaagttggagcttgtcgcccgccggaagtggaggcgctactgg
gtcacactgaaaggctgcagtctgctgttctatgcgacgttcgggcggagcagcggcgcc
gagcaggacctttctcctcactacgctctgctagcggacgacagcgtcgtccaggccgtc
ccggagcatccgcgcagggagcacgtcttctgtctgagcaactcgcacggagacgtctac
atgttccaggccactaaccagacggacctggagaactgggtgactgccatccactcggcc
agcgccgccctgctggccaggcgtcaggggaaggaggacacgctgcggctgctgcgctgc
cagagccgctcgctgctgcacaagatcgacatggacgggaagatgaagaagatggccgag
ctgcagctgtccatcatcaaggaccagaagagccggcgggcggtggagagccagatccag
cagtgggagcagaacctggagaagctgaacctggacctgttccggttccggtgttaccag
tccagcctgcagggctccgagctgcccaacccaaagagcctcctggccgtggccagccgc
ccctccaaagcctcactgggaagactgggagtcttctccgcctcctccttccacgctctg
gtgtgcagtcgtgaggacgggacgctgcggcggcgctgcaggtctgtgtcgggaggccgg
aggagaggcctgccgtcctccctgaaggttctacccaaacccatccaggacgggaaactc
tcggaccaccaggttctccatcgtcacgtctcggcaccatctgctcagtccgttcctgct
gtctgctggtcagaaactgtgacctgcgtgtccaaacaaagcgaggtgctgccctctgca
ggacatgtggcagaactgcagctgagcgaggagcgtcttccttcagctgctggagtcttc
agcctgaacgtctgtcgaccaaacacaaaccaggactttggttttgcggtgacgggtcac
gtggacggagcgggaaaaagtcacgtgttcgtcagtgacgtcgacccgctgggcctgtcg
gccagaggaggcctgctggccggagacgaggtgctggcagtcaacgggtcggccgtgtcc
ggactggacctggatcacctccagactctcttcagacaccagaacctccgcctgctgctg
aggagagacgagctgcctgacgcggaggaacccaccatcacatggcctgaccccgctgac
ctctgggtcaaacagtccgacctgcacacctggacctcagatgctgcgccccctgctggt
agtgacccatcaatgccgctcactcaggaatcacctgaacagaacacggaccaggttttc
tccctgtaccaaaccttcccagagagcaaaacgtcagacgttgatgttcccagaaacccg
tacgtcagagagggaagtctgcatccgccaagccccgcccacctgagcgtctgtcagcgg
ttacggaaagtcatccaggagctggtcgacacggagaagtcctacgtcaaggatctggtt
tgtctttttgaaatctacctgacgccgctgcagagcgagacgttcctcagtaaagacgag
atggaggcgctgttcggcagtctgccggagatgttggacttccagagagtttttctccaa
acgctggaggagagaatcgcttcctgtccggacttcagcagtttggaaactcctgagcag
tttaagatgctcctcttctcgttgggtggatcctttctctattacgccgaccacttcaag
ctctacagcggcttctgtgcaaaccacatcaaagtccagaaagttctggagagagcgaaa
acagacgcagccttcaagcacttcctggagacaaagaatccgaccaatcagcactcgtct
tctctggagtcgtacctgatcaaacctgttcagagggtcctgaagtatccactgctgctg
agggagctggtgtctctgactgacactgagagctccgagcacacacacctgacagaggcg
ctgcgagcgatggagaaggtagcgagtcacatcaatgagatgcagaagatctacgaggat
tatggctgcgtgtttgaccagctggcagccgagcagagcggcgctgacaaacaggtcaca
gagatctcgatgggggagttcctggtccactcgccggtggtctggttgaaccctctgccg
tgtctgcgacggctgagaaaggagcctcatctcacgctgttcgtgttcaagcgagccgtc
atcctggttcaccgtgagaacaagctgaagaagagaatgacgagctcccgttcagccgat
ctggaccccttcaggttccgctggttgatcccagtttcagctcttcaggtccgaccggcc
aacatcccaggttcagaggacccctgtgtatgggagctggttcacagcaggtcagaggtc
gagggtcgaccagagaccgtcttccagctgtgcagcagtgatctggaggcgaaggccgct
ttgctccgcgctctcagctccctcctcaaagaacaagctgctagcggctccctgaggaga
acccggctgtccgccgctgagaggagcgccacctggaggaggcggcccagacctggccgc
tccgacctccagagaactgctcctcatccgccggcagaacgctgcggcgccccggaggaa
acctgctccgagccgccgctgccgagccacgccggctcctccgggatgaggcccagactg
tgctccctgaccggagagctggaggcgcagctgcagcgcctcaacttctccgaggaggac
caaggagcggcgcagcgcctggacgaggaggagaggcggacctccagtctgcgtcggggt
gcagccggagacgggttggacttcagcagctctgtggggagagacttcagcgttcagagc
atgacgtccatgatcaacgaagactgcttctacgacccggtgctggcgatccaaacggac
aacagtaacctgctgacttga
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integrated database retrieval system
