Gambusia affinis (western mosquitofish): 122825688
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Entry
122825688 CDS
T07758
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122825688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaf03021
]
122825688
03036 Chromosome and associated proteins [BR:
gaf03036
]
122825688
Transcription machinery [BR:
gaf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122825688
Coactivators
SAGA/TFTC/STAGA complex
122825688
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
122825688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
AAA_23
Motif
Other DBs
NCBI-GeneID:
122825688
NCBI-ProteinID:
XP_043963169
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All DBs
Position
LG01:31544934..31557207
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AA seq
852 aa
AA seq
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MDGPAGITSAAEPITTAAQSHFDSLTTSGAVTGASGGADKEQASGAPALDGNGAVMNCQL
PGSGQSDSSQTAVANGPTSSSPGFIIRTSLSAQNTPTSSGSSSQPAEKTLPTVALVRPPM
QTSANETQSTESPNTILSPGSGSVSCKTEPTKSITPAGAQVLPSGVLSATMRNPTVLQNL
RTTLSSTISAAPPGGIRTIAPQVLAPRLTQPQQNTTSIQNIQIPAGMVLVRSESGQLLMI
HQQTLAQMQAQAQSQSATTPRPAAPTSTPPVQVTSLQTPGGPLLARSVTPTTIIKQGSPV
QTTIATTTTLQRPPVLQNTIILGGNATSTGQALGTPTTVQATAAVTQRVGSLGATGVPVT
PTAITAETLENVKKCGNFLSTLIKLASSGKQSSETTATVKELVRNLLEGKIEPEDFTSRL
YKELNSSPQPYLVPFLKRSLPALRQMTPDPEAFIQQSLLPQPSGQPAAATSPALGAVVLR
PSLSPAVSAATGSTTTKATVITLSQKANSKPGLVVTQQQQVRPQVTLAQSPLVTIRGATP
SRIIVGQPQMVRHIPQGSVVKKNVAPGTRGVQLLNQASLIDAQRNKLKEAGGGTFKDDDD
INDVASMAGVNLSEENARIMASSSELVGIVTRSCKDEAFLSIPSLTRIVLQIGKKFGVSE
LGTDVITYISHATQQRLQNLLENASHVAQLKNLNFKEDERCEQVSDVRAQLKFFEQLDQM
EKQRKEEQEREILLKAAKSRSRQEDPEQLRLKQKAKEMQQLELAQIRQREANLTALAAIG
PRKKRRTDSPLSGASAEGSGLGSSQPGGSSGQGSRQFMRQRITRVNLRDLLLCLENDRDS
NHSQLLYKGLLK
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggacgggccagctggaatcacatcagcggctgaaccaatcacgactgccgcacagagt
cacttcgattcactgacaacaagtggagcagttacaggagcatcaggtggagctgataaa
gaacaagcgtctggtgctccagctttggatggaaacggcgcggtgatgaactgtcagctc
cccggaagcgggcagtcagacagctcacagacagctgtggcgaatggacccacttcttcc
tctcctggttttattattcgaacttctttgagtgcacagaatactccgacctcatctggg
agttcgtctcagcctgctgagaaaactcttcccacagtggcgcttgtaaggccaccaatg
caaacttctgctaacgagactcaaagtacagaaagcccaaatacaatcttatcaccaggg
agcggtagtgtttcctgcaaaactgaacccactaaaagtataactccagccggtgcgcag
gtcctgccttcgggtgttttgtctgcgaccatgaggaatccgactgttctgcaaaacctg
aggactacattatcgtcaacgatcagtgccgctccgccaggaggaatacggaccattgct
ccacaggtgttagctcctcgactcactcagcctcaacaaaacactacaagtatccaaaac
atccaaatccctgcaggcatggtgttggttcgcagtgagagtgggcagctgctgatgatt
caccagcagactttggctcagatgcaggctcaggcacagtcacaaagcgcaacgacgcca
cgacctgcagcccccaccagcactccacctgtccaggtcacatctcttcagactccagga
ggtcctctgctggctcgctctgtaaccccgacgaccatcatcaaacagggttccccagtt
caaaccacaatagcaaccacaaccactctccagagacctcctgttctgcagaataccatc
atacttggaggaaatgccacttccacaggacaagctcttggaacgccaaccacagtgcag
gcaacggcagcagtaactcagagggtggggtccctcggggccactggggtgcccgtcact
ccaacagccatcacagctgaaacactagagaatgtgaagaagtgtggaaactttctgtct
acactcattaagttagcatccagtggaaaacagtcatctgagactacagccactgtcaag
gagcttgttaggaatttgctggaagggaagatagagcctgaggatttcaccagcaggttg
tacaaggagcttaattcttctcctcagccataccttgtaccttttcttaagagaagtctt
ccggcgttgcgtcaaatgaccccagatcccgaggccttcatccagcaaagcctgctgccc
cagccaagcggtcagccagctgcagcaacctctccagcccttggcgctgtggttctgcgt
ccttctctttctcctgcagtcagtgcggccacaggctctaccacgaccaaggccacagtc
atcaccctctctcagaaagccaacagtaaacccggactggttgtgacccagcagcagcag
gtgaggccacaggtgaccctggctcagtctcctttggtaacgatcagaggagcaacaccc
agccgcatcattgtgggtcaaccacagatggttagacacattccacaaggttctgtggtg
aagaaaaatgtggctccagggaccagaggagttcaactactcaaccaggcatccctcatc
gatgctcagaggaacaagctaaaggaagcaggaggggggactttcaaagatgatgacgat
ataaacgacgtggcttccatggcaggggtcaacttatccgaggagaacgcccgcatcatg
gccagtagctctgaacttgttggcatcgtgactcggtcctgtaaggatgaggctttcctc
tccatcccctctctcacccggatagttttgcagattggtaaaaagtttggtgtcagtgaa
ttgggcacagatgtgatcacctacatttcccatgctacacaacagcgactgcagaacctg
ttggaaaacgcttcgcatgttgcacagctgaagaatttaaattttaaggaggacgagcgg
tgtgagcaggtcagcgacgtgcgagctcaactcaaattctttgagcagctggatcagatg
gagaagcaaaggaaggaggagcaagagagagagatcctgctgaaggctgccaagtctagg
tcacggcaagaagacccagagcagctcagactgaaacagaaggccaaagagatgcagcag
ctggagttggctcagatcaggcagagagaagccaacctaacagcgttggcagcaatcggc
ccgaggaaaaaacggagaacagactcccctttaagcggtgcgagtgcagagggttcaggg
ttgggatcctcccagcctggaggctccagtgggcagggctccagacagtttatgcgccag
cgcatcaccagagttaacctccgggacctgcttttatgtctggagaatgacagagactcc
aatcactcccagctactctacaaaggtctcctcaaataa
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