Gambusia affinis (western mosquitofish): 122825694
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Entry
122825694 CDS
T07758
Symbol
stxbp5a
Name
(RefSeq) syntaxin-binding protein 5a isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122825694 (stxbp5a)
Membrane trafficking [BR:
gaf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122825694 (stxbp5a)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
122825694 (stxbp5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
WD40_Prp19
ANAPC4_WD40
WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Lgl_C
EIF3I
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
VPS8_N
Beta-prop_VPS8
CFAP43_N
Synaptobrevin
WD40_like
Beta-prop_WDR35_TULP_N
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
122825694
NCBI-ProteinID:
XP_043963140
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Position
LG22:10165155..10261542
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AA seq
1145 aa
AA seq
DB search
MKKFNIRKVLDGLKEASSSSSSSTPSVQVGPQENNLIQETLQSEHFQLCKTVRHGFPYQP
SSMAFDPVQKILAIGTQSGALRLFGRPGVECYCQHESGAAVIQLQFLINEGALVSALADD
SVHLWNLRQKRPAVLHSLKFNRERITFCHLPFQSKWLYIGTERGNIHIVNVESFMLSGYV
IMWNKAIELSSKTHPGPVVHISDNPMDEGKLIIGFESGIVVLWDLKSKKADYRYTYDEAI
HSVAWHHDGKQFICSHSDGTLTIWNIRGQGKPIQTITPHGKQPKDGKKSESCKPILKVEY
KTTRNGDPFIIFSGGLSYDTVGRRPCLTVMHGKSIAVLEMDYPIVDFLTLCETPYPNDFQ
EPYAVVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYFADCPVDLIPALYSVG
SRQKRQGYSKKEWPISGGNWGQGTQSYSEIIITGHADGTVKFWDASAIMLQVLYKLKTAK
VFDRNRSKEDKGSTEVSDEDPFAIQIMAWCPESRMLCVAGVSANVIIYRFSKLEVTTEVV
QLLEVRMQYELNETESPDGGGGEQTSAHPTPGASPQTSGPPSHPSTSSNNSDGGNIPCLK
VRSSPLKQSPGYQVDLVVQSVWVSGEPPQQITSLAMNSSYGLLVFGNSNGLAVVDYIQKT
VVLNLGTVELYGSNDPYQRQPRSPRKARQPSGGLCDINECSATSEDCCKSPTSVLMSHSN
LQQFYNGGGRGAKMSRKLSLPTELKPDLVLLSVCPPRAANPLDHRDNSFSRSRSSSVTSI
DKEARETINSFHFCETFARKGDSTLTPCLYVGTSLGTVLVLALTLPPAGEQRQLQPIIIS
PTGMLVRLKGSIMRMAFLDSAGSLLPSAFETWCEPNVTADGEEREKIRKRRPVSVSPSTS
QELNESQFAVVCSEKQAKVISLPSQTCIYKHSITEASFVLRADVVQMNQSVCMACFCANG
HIMTLSVPGLRPLMDVNYLPLTDMRIARTFCFTNLGQAMYLCSPTEIQRITYSQETCENL
QEMLGELFTPVETPEAPNRGFFKGLFGGGAQSLDREELFGEIVAGKASRSLAQHIPGPGG
IEGMKGAASGVVGDLARARIALDERGQKLGEMEERTAAMMASADSFSKHAHDMMLKCKDK
KWYQF
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaacatcaggaaggtgctggacggcttgaaagaggcgtcttcctcctct
tcctcctccacgccgtctgtccaagtagggccccaggagaacaacctgatccaggagacg
ctccagtccgagcatttccagctctgcaagactgtccgtcatggcttcccctatcagcct
tcgtcgatggcttttgaccccgtgcagaagatcctggccatcggtacccagagtggagct
ctcagattgtttggtcgtcctggggtcgaatgctactgtcagcatgagagcggagcagcc
gtcatccagctccagtttcttatcaatgagggagcgctggtgagtgctttggccgatgac
agcgtccacttgtggaacctgaggcagaaaagaccagcagtcctccattccctcaagttc
aacagagagagaataactttctgccacctgccattccagagtaaatggctgtacatcggc
acagaacgagggaacatccacatcgtcaatgtggagtccttcatgctctcaggctacgtc
atcatgtggaacaaagccattgaactttcctccaagactcacccgggacccgttgtccac
ataagtgataaccctatggatgagggaaagcttataattggatttgagtctgggatcgtg
gtcctgtgggatttgaaatcaaagaaagcagactatcgctacacttatgatgaggctatc
cactcagttgcctggcatcatgatggaaaacagttcatttgcagtcattcagatggaact
ctgactatatggaacatcagaggccaaggaaaacccatacagacaatcacaccgcatgga
aaacagcccaaggatggaaagaagtcagagtcgtgtaaacccattcttaaagtggaatat
aaaacaacgagaaatggggaccctttcattatattctctggtggtctgtcttatgacacg
gtgggacggaggccatgtctgacagtcatgcacggaaagagtattgctgtgctggagatg
gattatcctatcgtagactttctcacgctatgtgagacaccatatcctaatgattttcag
gagccttatgctgtggtggtcctgttagaaaaagatttagtggtgatcgaccttgcacaa
aatggttaccccatatttgagaacccatatcctctaacgatccacgagtctcctgtaacc
tgctgtgagtactttgccgactgccctgtggatctgattcctgcactttactctgttggt
tcacggcaaaagcgacagggttacagcaaaaaggagtggcctattagtggtggaaactgg
ggacagggcacacagagctactccgagatcatcatcactggtcatgctgatggaacagtg
aagttctgggatgcctctgcaataatgctccaggtgctttacaagttaaaaacggcaaag
gtttttgacaggaaccgatccaaggaagacaagggcagcactgaggtgtcggacgaagat
ccctttgccattcagattatggcctggtgccctgagagcaggatgctgtgtgtggccggg
gtgtcagccaatgttatcatctaccgcttcagcaagcttgaagtaactactgaggtggtg
cagttactagaggtgcgaatgcagtacgagctgaacgaaacagagtctccagatggtgga
ggtggcgagcaaacgtcggcacatcccacccctggtgcctcccctcagacaagcggccca
ccttcacacccttctaccagcagcaacaactctgacggaggcaacataccctgccttaaa
gtgcgaagttctcctttgaagcagtctccaggctaccaggtggatttggtggtccagtca
gtgtgggtgagtggagagcctcctcagcagatcacaagtctggcgatgaattcctcctac
ggcctattggtgtttggcaacagtaacggcctggcagtggtggactacatccagaaaacg
gtagttcttaatctgggcacggtggagctttacggatccaatgatccctaccagagacag
cctcggtcgccaagaaaagcacggcagccttccggaggcttgtgtgacattaacgaatgt
tcagccacatcagaggactgctgcaagtctccaacttcagtgttgatgtcacacagcaat
cttcaacagttctacaatggaggtggtagaggagcaaagatgtcacggaaattaagctta
cctactgagctaaagccagacttggtcctcctgtccgtgtgcccaccgcgggctgccaac
cccttagaccaccgggacaactctttcagccgctcccgctcctccagcgtcaccagcatc
gacaaggaagcccgagagaccatcaactcctttcacttctgtgagacttttgcccggaag
ggagacagcactttgacgccctgtctatatgtcggcacttcgctggggactgtactagtt
ttggcactcactttgccacctgcaggggagcagcggcaactgcagccaattatcatttca
cctactggtatgttggtgcggctcaagggaagcatcatgcggatggcttttctggactct
gctggttccctgctaccttctgcatttgaaacgtggtgtgagcccaacgtcacagctgat
ggtgaagaaagagagaagatccgaaagaggcggcctgtctccgtttcaccttccacctca
caggagctcaatgagagccagtttgctgtggtgtgctctgagaagcaggccaaggtcatt
tcacttccttcccagacctgcatctacaaacacagcatcacagaggcttctttcgtctta
cgggcagacgttgtacagatgaaccagtcagtgtgcatggcttgtttttgtgccaacggc
cacataatgaccctcagtgtgccgggactgagaccgctcatggatgtaaactacctacct
ttgacagacatgcgaatagccaggacgttctgcttcacaaacctaggccaggccatgtac
ctttgctcgcctactgagattcagaggataacttacagtcaagaaacctgtgaaaattta
caggagatgctgggcgaactttttacaccagtagagacaccagaggcaccaaacagaggg
ttttttaaaggtctctttggaggaggagcgcaatcgcttgacagagaagaactatttggt
gagatagtggctgggaaggcatctcgaagtctggcccagcacatccccggcccaggtggc
atcgaggggatgaagggggcggcttcaggtgtggtcggagatctggcacgtgctcggata
gcactggacgaaagaggccaaaaactgggtgaaatggaggagaggacagctgccatgatg
gccagcgcagattctttttccaaacatgcccatgatatgatgctgaaatgcaaagacaaa
aaatggtaccaattctga
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