Gambusia affinis (western mosquitofish): 122825756
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Entry
122825756 CDS
T07758
Symbol
capn3b
Name
(RefSeq) calpain-3b isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122825756 (capn3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gaf01002
]
122825756 (capn3b)
Enzymes [BR:
gaf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
122825756 (capn3b)
Peptidases and inhibitors [BR:
gaf01002
]
Cysteine peptidases
Family C2: calpain family
122825756 (capn3b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
Integrase_DNA
Motif
Other DBs
NCBI-GeneID:
122825756
NCBI-ProteinID:
XP_043963227
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All DBs
Position
LG22:8040155..8051116
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AA seq
771 aa
AA seq
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MEDGNHPEKKLVVEKTKVKVLHDTEASLEADGNVDYGITGANSIYSAILSRNEAVKDAKR
LKTFLELRDKYVTKQVLFEDPLFPANDSSLFYSQMPKMKFEWKRPSEICEDPQFIVDGAN
RTDICQGTLGDCWLLAAIACLTLNEKLLYRVIPPDQSFTENYAGIFHFQFWRYGEWIDVV
VDDRIPTCDNQLVFTKSFRKNEFWSALLEKAYAKLHGSYEALKGGNTLEAMEDFTGGVTE
FFELSEAPADLFTIMRKALERGSLMGSSIDVSSANEMESRTDQGLVRGHAYSIISLEECD
EVSKDSRIRLIRLRNPWGFVLWKGCWSAKSDEWLTISTADRENLKKQTVETSEFWMSFDE
FKKTFTKLEMCNLTPDGLQDDVRMTWTVSVNEGRWVRGSSAGGCRNFPDTFWTNPQYRLQ
LYEEDDDPEDGEVACTVVVALMQKGRRMQRHKGAKFLTIGFSIYKVPEKMQGQNQHLQKD
FFLYTASTAKCKSYINLREVSERFRLPPGEYAIIPTTFEPHEEGEFILRVFSEKQSTSEE
VGSTIERDQIEQDKKKKKKPIVFVSDIAHANKEIEHDGIQGEKRKKPKKKLLQAEEETEE
EKKFRAIYKQIAGEDMEICANELKTVMKNVLSKHSEIKTEGFSLETCRSMIALMDTDGSG
KLNLQEFKHLWKKIKAWQLIFKQYNQNKSCSISSFEMRNAVNDAGFHLNKQLYDIIAMRY
ADEHLNIDFDSYICCFVRLEGMFRAFNAFDKDGDGIIKLNVLEWLQLTMYS
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgggaaccatccagagaagaaacttgtggttgaaaagactaaggtgaaagtg
cttcatgacactgaggcgtcactggaggctgatggcaatgtggactacgggatcacagga
gcaaactccatctactctgccatcctcagcagaaacgaggcagtcaaagatgcaaagcgc
ctgaagacctttttggagctgagggataaatatgtgacaaagcaagttctttttgaggac
cctctcttccctgcaaacgactcctcacttttttacagccagatgcccaaaatgaagttt
gagtggaaacgtccctcagaaatctgtgaagatccccagttcatcgttgatggagccaac
agaaccgacatctgccaaggaactctgggagactgctggctgctcgccgccattgcctgt
ctgactctgaacgagaagctgctgtacagagtgattcctccagatcagagcttcactgag
aattacgccggaatcttccactttcagttctggcgttatggtgagtggatcgatgtggtt
gtggatgaccgcatccccacctgcgacaaccagctggttttcaccaaatctttcagaaag
aacgaattctggagcgctttgttggaaaaagcgtatgccaagttgcatggatcttatgag
gcactgaaagggggaaacactttggaagccatggaggatttcacaggtggagtcactgag
ttttttgagctgtccgaggcacctgctgatctcttcaccatcatgaggaaggcgctggag
aggggctcactgatgggcagctccatagatgtttcctccgccaatgaaatggagtcccgg
actgaccaagggctggtcaggggtcacgcctactccatcatcagcctggaagagtgtgac
gaagtctcaaaggactccagaatccgcctgattcgtctacgcaatccatggggatttgtg
ctctggaagggttgctggagtgctaagtcagatgagtggttgactatttctactgcagac
agggagaatttgaaaaaacagacggtggagacaagtgagttctggatgtcctttgatgag
ttcaagaagactttcaccaaacttgagatgtgtaacctcacccccgacggactgcaggat
gacgtacggatgacctggacggtttcggtcaatgaaggtcgctgggtgagaggcagctct
gctggtggctgcaggaacttcccagacacattttggacaaaccctcagtatcggcttcag
ctctatgaggaggacgacgacccagaggacggggaggtggcctgcactgttgttgtagcc
ctgatgcaaaagggtcggaggatgcagcgccataaaggagcaaaattccttaccattgga
ttttctatctacaaggtgccagagaagatgcaaggccagaatcaacatctgcagaaggac
ttcttcctctacacggcctccacagctaaatgcaagagttacatcaacctgcgggaggtg
tcggagcgcttccgactgcctccgggagagtatgccatcatccccacgacctttgaaccc
catgaggagggagagttcatcctcagggtcttctctgagaagcagagcacatctgaggaa
gtagggagcaccattgaacgtgatcaaatagagcaagacaagaaaaagaaaaagaagcct
attgtatttgtatcagacatagctcacgccaacaaagaaattgagcacgacggcattcag
ggggaaaagaggaagaaaccaaagaagaagctgctgcaagccgaggaagagactgaggaa
gagaaaaagttcagagccatttacaaacagattgcaggcgaggacatggagatctgtgca
aatgaactcaagacggtcatgaagaacgttctttctaaacatagtgagataaagacagaa
ggcttcagtcttgagacgtgtcgaagcatgatcgccttaatggatactgatggatcgggc
aaactgaatctccaggaattcaaacacttgtggaaaaagataaaagcatggcagctcatc
ttcaaacagtacaatcaaaacaagtcctgctccatcagcagctttgagatgaggaacgct
gtcaatgatgcagggtttcacctcaacaaacagttgtacgacatcatagccatgcgatac
gcagatgaacacctcaacattgactttgacagctacatctgctgttttgtgagactggag
gggatgttcagggcctttaacgccttcgataaagacggagatggaataattaaactaaat
gtcctggagtggcttcagctgacgatgtattcctag
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