Gambusia affinis (western mosquitofish): 122825797
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Entry
122825797 CDS
T07758
Symbol
prdm1c
Name
(RefSeq) PR domain zinc finger protein 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122825797 (prdm1c)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
122825797 (prdm1c)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
zf-met
Zf-C2H2_ZNF451
STL11_N
zf-C2HE
zf-C2H2_15
zf-BED
zf-Vps39_C
Motif
Other DBs
NCBI-GeneID:
122825797
NCBI-ProteinID:
XP_043963290
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Position
LG22:8679523..8688611
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AA seq
783 aa
AA seq
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MCGSSQGFKASSSECTTDMLTSERSPQSIGATSVTGTQNLDMRSWSEANFEEQCTYIVKD
HPLEEESKSHGKTRAERSLPRNLALKRCYSSTEVLGVTSKELIPKGTRFGPLVGESYTSK
TLPKNADSRYFWRVFSEGHLHHILDGLNEEQSNWMRYVNPARSVEEQNLVACQIGLDIFF
YTIKPLQPDQELLVWYSSELAQRCNYPHLGQLAVEKNEQIQACEKIKGKRGHTVSEILRD
EPSRPKSICLRHQDSQVFSTSVPVFPLCSNTVYPMQSNLEPTHGFRYVPLLSLAPYSASA
AKRPALSTPIPTNLHFTLQHTQDVGKTEPHQKPCVSKDVHSTLRESPYLLPHYSLGLLPH
SLPFYNERLKPHLPTSSKFLPFDNYAHFLHPSGSGSKDFLLVSSNYKQDLSLMQNSEHKD
TNDLYSKKANYLKNTSNDLRDFKYSACTNVYTDLTASTKASSPPIGINLHGEPSFAPQEC
SPPVATAASSNYLPSKPTAATQSNAEDALDLGRQKRGGQIIGYKTLSYPLTRQNGKIRYE
CNICGKVFGQLSNLKVHLRVHSGERPFKCQTCNKTFTQLAHLQKHYLVHTGEKPHECKVC
HKRFSSTSNLKTHQRLHSGERPYQCKLCPAQFTQFIHLKLHKRLHTGEGTHRCPRCSSTY
LHYSSLQVHLQGFCPLSPSASRRLSPEELQRVNSEIERFDMSEAAEQLEVMATEAEIDKG
NIIDLIQKIENNILSLQDAARGKAELSISRSAAECTAAQMHFHSPMVLPPASIKLESGCI
SKT
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctcctctcaaggctttaaagcctcttcttctgaatgcaccacagacatgcta
acctcagagaggtcaccacagagcataggagctacctctgtgacaggtacacaaaattta
gatatgagatcgtggagcgaagccaactttgaggagcagtgcacctacattgtgaaagac
catcctctggaggaagagtccaaaagccatggcaaaacaagagccgagaggtctttgccc
agaaaccttgccctgaaacgttgctacagttctacagaggtgcttggagtgaccagtaag
gagttgattccaaagggtacccgttttggtcctctcgttggcgaaagctacaccagcaaa
acactgccaaaaaatgctgacagcagatacttctggagggtcttctcagaggggcatctt
caccatatcctggatggtttgaatgaggaacaaagcaactggatgcgttatgtcaaccca
gcaagatcagtagaagagcagaatctggttgcctgccagataggtttggacatcttcttt
tacacaatcaaaccacttcagccagatcaggagcttctggtgtggtacagctctgaactt
gcccagcgttgcaactaccctcatcttggccaactagctgttgagaaaaatgagcagatt
caggcttgcgaaaagatcaaaggaaaacgaggacacactgtttctgagattctccgagat
gaaccttccagacctaaatctatctgtctcagacaccaggacagtcaggtgttttcaacg
agtgtcccagtttttcccttatgttccaatactgtctacccaatgcagtccaacttggag
cccactcatggcttcagatatgttcctttactatctttggcaccatacagtgcttctgct
gccaaaaggccagcattaagcactcccattccaactaatttgcacttcaccctgcaacac
actcaagacgttggtaaaactgaacctcaccaaaagccttgtgtttctaaggatgttcac
tccactctcagggagagcccctatctattgcctcactactcactgggacttctcccgcat
tcattaccattctacaatgaacgactgaaaccacacttgcccacatcctctaagttttta
cctttcgacaactatgcacactttctacatccttcaggtagtggttccaaagacttttta
cttgtgtcatccaactacaaacaagacctcagtcttatgcaaaacagtgagcacaaagac
accaatgacctctactccaaaaaggcaaactacctcaagaatacttcaaatgacctcaga
gacttcaaatactctgcttgcaccaatgtctacacagacctcactgcatctaccaaggcc
agctccccacccattggcattaatctccatggagaaccttcttttgcacctcaggaatgc
tcacctccagttgctacagctgcctcctcaaactaccttccttccaaacctacagctgcc
actcagagcaatgctgaagatgcattggatcttgggaggcaaaagagaggaggccagatc
attggctacaagacgctgtcttatccactcacaaggcaaaatggaaagattcggtatgaa
tgcaacatctgtggaaaggtcttcggacagctgtccaatctcaaggttcatctgcgagtg
cacagtggtgagcgtccatttaaatgtcagacctgcaacaagaccttcactcagctggca
cacttgcaaaaacactacctggttcacacaggagagaaacctcacgagtgcaaggtgtgc
cataagagatttagcagcactagcaacctgaagacccaccagagattgcactccggtgag
aggccttaccagtgcaagctctgcccagcccaatttactcaatttattcacctcaagctt
cacaagcggctgcatacaggggaggggactcaccgctgtcctcgctgctccagcacgtat
cttcactacagtagcctgcaggtgcacctccaaggcttctgccctctttccccctcagca
tcccggaggctgtcaccagaggagctacaacgggtcaattctgagatagagaggttcgac
atgagtgaggcagcagagcagctagaagtaatggccaccgaggccgagatagacaaaggg
aacatcattgacctgatacaaaagatagagaataatatcttaagcctccaagatgctgcc
agagggaaggccgagctgagcatctctagatcagcagcggagtgtaccgctgctcaaatg
cattttcatagtcccatggttttgccaccagcaagcatcaagctggagtcaggctgcatt
tcaaagacttaa
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