Gambusia affinis (western mosquitofish): 122826039
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Entry
122826039 CDS
T07758
Symbol
prdm4
Name
(RefSeq) PR domain zinc finger protein 4
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122826039 (prdm4)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
122826039 (prdm4)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf_PR_Knuckle
zf-C2H2_4
SET
zf-C2H2_jaz
zf-met
zf-C2HE
zf-C2H2_6
Suf
Motif
Other DBs
NCBI-GeneID:
122826039
NCBI-ProteinID:
XP_043963431
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Position
LG23:7078160..7086480
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AA seq
888 aa
AA seq
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MNDMNLSPVGMDQLSVPSVSAGHLGLPTSPTHNPIPTPGMPVAIPSLGPSLGSLPSALSL
MLPMGPLSDRGVMCGLPERNYSLPPPPYPHLESSYFRHLLPGILSYLADRPPPQYIHPSS
LNMDGTLSVASNNPSSLDPYSGPGGPLEQGLVPLDSRQVSGQADLHQAGPHELDSTGLAM
ESRVNSPLSPDRMGEELASMDGVVVVSDAQQLGGGRQPQPHEGGVMPLHGPPVLELPVVM
EPDHLGDRVGSSGTGGAGGGGGGGGGNGGLGEQLHGNGEINPSVVSVVLTGSMSNPSQLE
PVSLHGHSGMGLEAVNVSSITAEVALGPENNLVLVNSTLQLEDPAPSKENMNAPCSIWCT
LCERSYASDCPEHGPVTFIPDMPIQSRARLSLPRPLCLRISVTDEPLGVFARDVIPPRTC
FGPMVGQHCSNVDLSDWPEKDTPQIWKMYHNNVLEFYIVTTDENECNWMMFVRKARTHEE
QNLVAYPANGKLFFCTSTEIHPEQELLFYYSRDYCRLMGVPQVPDGQICQCGKECSSFSE
LKSHLNSHSSNHSHNQPAHSHSPSLQDHAQAQQQQQQQQQQQQQQPAPPQQQQELQSQQQ
QQHVPPEEKLLNGSSSASSSPWPCSNPAAGQANGDSRSANRNSNSVTSRGRGQGSVREKK
FKCSMCSRAFTTSTKLNVHFMGHVGMKPHKCEYCSKAFSDPSNLRMHLKIHTGQKNYKCT
VCGKSFTQKSHVASHMLIHTGAEKLKCDLCDRSFIRKQDLRQHMFSHTNERQIQCTKCNK
HFLKTNHLKKHMNSHEGKRDFVCEKCHKAFLTKYHLTRHLKICKGPKRDRATRKEQNVFK
EEEEEEEDEEDDEEEDSRGRRGGGELNDEDYGLDVGGYNSEKSLSPPH
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacatgaacctgagtcctgtaggcatggaccagctgagtgtgccctcagtgagt
gccggccacctgggtctgcccacttctcccacccacaatcccattcccaccccaggcatg
ccggtggccatccccagtctgggcccgtccctcggctctctcccctctgctctgtccctg
atgctgcccatgggtcctctcagcgacagaggggtgatgtgcggcctgcctgagaggaat
tactccctgcctcctccgccgtatccccacctggagagcagttacttccgacacctactg
ccaggtattttgtcctacctggcagaccgtccacctcctcagtacattcatcccagcagc
cttaacatggacgggacgctgtctgtggccagcaacaacccctccagtttggacccctac
agcgggcctgggggccctctggagcagggcctggtgcccttggactcgaggcaagtcagc
ggtcaggcagaccttcaccaggccggccctcatgagctggactccacagggctggccatg
gagtcacgcgttaacagcccgctgtctcctgaccggatgggggaggagctagccagcatg
gacggggtggtggtggtgtccgacgcccagcagctcggcggaggacggcagcctcagcct
cacgaggggggggtgatgcctctccatgggccccccgtgctggagctgcctgtggtgatg
gagccggaccacctgggagacagagtgggaagctccgggacgggaggagctgggggcggg
ggagggggaggtggcggaaacggggggctcggggagcagctccacgggaacggagagata
aacccgagcgtggtgagcgtggtgctcaccggctccatgtccaaccccagccagctggag
cccgtgtctctccacggacactcggggatggggctggaggcggtcaatgtgtcctccatc
accgccgaggtggccctcggccccgagaacaacctggtcctcgtaaactccaccctgcag
ctggaggatccggctcccagcaaggagaacatgaacgccccctgctccatctggtgcacg
ctgtgtgagcgctcctacgcctccgactgtccggagcacggtccggtcaccttcatcccc
gacatgccgatccaaagccgggctcgcctctccttgccgcgtcctctctgccttcgcatc
tctgtaaccgatgaaccgcttggagtgtttgcacgggacgtcattcctccgaggacctgc
ttcgggccaatggtggggcagcactgcagcaacgtggatctctctgattggccagaaaag
gacacgcctcagatctggaagatgtaccacaacaacgtgctggagttctacatcgtgaca
accgatgaaaacgagtgcaactggatgatgtttgtgcgcaaggcgaggacccacgaagag
caaaatctggtggcgtatcccgccaacgggaagctgttcttctgtacgtccacagagatt
catcccgagcaggagctgctcttctactacagccgagattactgcaggctgatgggtgtt
cctcaggtccccgacggccagatctgccagtgtggcaaagagtgctcgtcgttctccgag
ctcaagtctcacctcaacagccatagcagcaaccacagccataaccagcctgcgcacagt
cacagcccatcgctgcaggaccacgcccaggcgcagcagcagcagcagcagcagcagcag
cagcagcagcaacagccggcaccacctcagcagcaacaagagctgcagtcacagcagcag
cagcaacacgttccacccgaggaaaagcttctcaacggcagctccagcgcctcgtcctcc
ccatggccttgtagcaaccccgccgcgggacaagcaaacggcgatagccgcagcgccaac
aggaactccaacagcgttacctccagggggagaggtcagggcagcgtgcgggagaagaag
ttcaagtgcagcatgtgctctcgggctttcaccacttccacgaagctgaacgtgcacttc
atggggcacgtagggatgaagcctcacaagtgcgagtactgcagcaaggcgttcagcgat
cccagcaacctcaggatgcacctcaagattcacacaggtcagaaaaactacaaatgcacg
gtttgcgggaagtcgttcactcagaaatctcacgtggcttcccacatgctcatccacacc
ggcgcagagaagctcaagtgtgacctttgcgacagatcgttcatccggaaacaagatctg
agacaacacatgttctctcacacaaatgagcgccagattcagtgcacaaagtgcaacaag
cacttcctgaaaaccaaccacctaaagaaacacatgaactctcatgagggcaagagagac
tttgtctgcgagaagtgccacaaagcttttctgactaaataccacctcacacgtcacctt
aagatctgcaaagggcccaagagagacagagcgactcgaaaggaacagaacgttttcaag
gaagaggaggaagaagaagaggatgaggaggacgacgaagaagaggacagcagagggaga
agaggtggaggagaactgaatgatgaggactatggtttagatgttggaggttataactct
gaaaagtccctgtcccctcctcattga
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