Gambusia affinis (western mosquitofish): 122826162
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Entry
122826162 CDS
T07758
Symbol
si:dkey-159a18.1
Name
(RefSeq) sortilin
KO
K12388
sortilin
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
122826162 (si:dkey-159a18.1)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
122826162
NCBI-ProteinID:
XP_043963642
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Position
LG23:12914261..12925072
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AA seq
826 aa
AA seq
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MIWITVLLSGLCVLHIALLLLAEGSSSSGGPWGRTVTFRRDKRAPRLQRDTSSSTDSSNP
SRGPAFASCRLPLTPMEHKILDDNTQETGFNGDDGSHVILTWVGDGTGVILVLSTISAPL
DSYLAGGSSRLYRSTDYGKSFHDISHRINHTFIKEELGISVGPGSSVILTADTPIVDNPG
GIIFTSMDAGATFKSTQLPFHLDQSITYHFFNPDYLVALSIDDSLWLSLDFGATWTKVHE
GVHSFSWGAGTNLFFSCSRVDAVEAEERGDLVLKRTKDLGKTFTIIHEDVFSFGYIGAFL
FFSVMEDPRSPRVMYFSSDQGETFSQALLPSASTEQFYSILDGDEDMLFLHVDNPGDTFF
GTMYTSDDRGILFSKSLERHLFDGHRKSDFTNITSLRGVYLTNKLDIDGRIRSVISFNRG
GTWRQLKKPQNVNCADNVKRCNLHIHGEHSRKNRIVPMLALSEPTAIGLVIAHGSVGDSL
SSSQHPDVFVSSDGGYNWRGTLRGPHHYSILDSGGLIVAVEVHREGQVKTIKFSTDEGQC
WKSYNFTEQPFFFAGLASEPGTKAMNVSVWGFRPEEDGQPMWVAVTIDFQSLITRECNKK
DYEEWLAHSTDKRNSERNGCVLGMKETYRRLKKQSVCRNGRNFVVTKKQIPCPCTREDYL
CDYGYYRHVNTSECVRQPNTPNKTFEMCLNGEEDELLTAGYRKVPSDKCQGGFTPQDVVQ
TIIRPCGVKPSPDPSVQSTSVGHFDTPKERLVLILVSVGAAVIVLVAIVSAVLVVKRGVY
RTRMPAYRFSNLRIQDDNNGITAEIGSAASSNGTACQNDSDVDLLE
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgatctggatcaccgtgctccttagtgggctgtgcgtcctccacattgccctccttctc
ttagccgaggggagcagcagcagcggcggtccctggggaaggacggtcactttccggcgg
gacaaacgggccccacgcctccagagggacaccagcagctccacagactcttcaaaccct
tctcgcggtcctgccttcgcctcttgccggcttcccctcaccccaatggaacacaagatt
ctggacgataacacacaggagacagggtttaatggtgatgacggctcccacgtgattctc
acatgggtgggcgatggtacaggagtgatcctggtgctgtcgacaatcagcgctccgctt
gattcttacctggcgggaggctcatctcgactctaccgaagcacagattatggcaagtcc
tttcacgatatctcccaccgcatcaaccacaccttcatcaaagaggagcttggaatcagt
gttggaccagggagctcagtgatactgactgcagacacacccattgtggacaacccggga
gggatcatcttcacctctatggatgctggagcaactttcaaatccacccagctgcccttt
cacctggatcagtccattacttaccacttcttcaaccccgactacttggtggcccttagt
atagatgacagtctttggctctcgctggactttggtgctacatggacaaaagttcacgag
ggagtgcattctttctcatggggagcaggcacaaatctgttcttcagctgcagccgggtt
gatgcagttgaagcagaagaaagaggagatttagtgttgaagaggacgaaggatttgggg
aagaccttcaccataattcacgaggacgtcttcagttttggctacattggcgcctttctc
ttcttctctgtgatggaggacccgaggtctcctcgtgtcatgtatttttcatcagaccaa
ggagagaccttcagtcaggcgcttctcccttctgcatcaacagagcagttttactccatc
ctggacggagacgaggacatgctcttcttgcatgtggacaacccaggagacaccttcttt
ggaactatgtacacgtcagatgaccgtggaatattgttctccaagtcgctggaacgacat
ctgtttgatggacacaggaagagcgatttcaccaacatcacctcactgagaggagtttat
ctaactaataaactagatatcgatggtcgaataagatctgtcatttccttcaacagagga
ggaacatggaggcaactgaagaaaccccagaatgtgaactgcgcagacaatgtgaagcgc
tgtaaccttcacattcatggagaacacagtcgtaaaaaccgaatagttccaatgctcgct
ctgtctgagccaactgccattggtctcgtcattgctcacggctctgtgggtgattctctc
tcatcatctcagcacccagatgtgtttgtttcctcggatggggggtataactggagaggg
acccttaggggccctcaccactacagcatactagactctgggggtctcatagtggctgtg
gaggttcaccgtgaaggacaagtcaagaccatcaaattctccactgatgagggccagtgc
tggaagtcgtataacttcaccgagcagcccttcttcttcgcaggcctggcctctgagcca
ggcaccaaggccatgaatgtcagcgtgtggggcttcaggccagaggaagacggtcagccg
atgtgggtggctgtcactatcgacttccagagcctcattaccagagaatgtaataagaag
gactacgaagagtggctggctcattctacagacaaaaggaactcggagagaaatggttgt
gtccttggtatgaaggaaacctacaggaggctgaagaagcagtctgtgtgcagaaatggg
cgaaactttgtggtcactaagaagcaaatcccatgcccatgcaccagagaggactactta
tgtgactatggctactatcgtcacgtgaacacctcagagtgtgtgagacagccaaatact
ccaaacaaaacttttgagatgtgtctgaatggagaggaggatgagcttctgactgctgga
taccgaaaagtcccaagtgacaagtgtcagggtgggttcactcctcaggatgtggtgcag
acaatcatccgaccatgtggggttaagcccagccctgacccttcagtccagtccacatca
gttggacactttgacactccaaaagaaaggcttgtcctgatcctggtgtctgtaggagca
gcagttattgttctagtggctattgtctctgcagttcttgttgtcaagagaggtgtttat
aggaccaggatgccagcgtatcgtttctctaaccttcgtatccaggatgataataatggc
atcacagcagagatcgggagtgctgccagcagcaatggtacagcttgccagaatgactca
gatgtggatcttctcgaatga
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