Gambusia affinis (western mosquitofish): 122826184
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Entry
122826184 CDS
T07758
Symbol
thbs4a
Name
(RefSeq) thrombospondin-4a isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04145
Phagosome
gaf04510
Focal adhesion
gaf04512
ECM-receptor interaction
gaf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122826184 (thbs4a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122826184 (thbs4a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
122826184 (thbs4a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122826184 (thbs4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122826184 (thbs4a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gaf04147
]
122826184 (thbs4a)
00536 Glycosaminoglycan binding proteins [BR:
gaf00536
]
122826184 (thbs4a)
Membrane trafficking [BR:
gaf04131
]
Endocytosis
Phagocytosis
Opsonins
122826184 (thbs4a)
Exosome [BR:
gaf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122826184 (thbs4a)
Exosomal proteins of colorectal cancer cells
122826184 (thbs4a)
Exosomal proteins of bladder cancer cells
122826184 (thbs4a)
Glycosaminoglycan binding proteins [BR:
gaf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122826184 (thbs4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
COMP
EGF_3
cEGF
EGF
Laminin_G_2
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
122826184
NCBI-ProteinID:
XP_043963685
LinkDB
All DBs
Position
LG03:15230724..15243160
Genome browser
AA seq
976 aa
AA seq
DB search
MCFKAAALWLVLQQLLLTVAAQGIVYDLLVSPDCLPDLLQGSLKNKGRDEAFLLSSFRLQ
NRAPTSLFSVLNPKDNNKYLELSVQAKLSKVTLRYQKTDGRFGTTSFNHGSLADGREHHV
MMHASGLQRGPPRLNIYVDCRLAHTVNDLPAAFGSLPPGPNKVALRTLQSSGQDNLTDLK
LVIEDTIDNVATLQDCSMEPTESLHLLGFQGGRVVQSQTTMQELKSMLSEMRELLHKQIK
ETNFLRNTIAECLACGLGGSPTNPVPGPSPEQVVFPSHLTGCPPGTCFRQNMCISSESGG
FQCAPCPDGYTGDGVHCDDVDECSFNPCFPGVRCVNTAPGFRCEKCPVGYTGSEINGVGV
SYAKSHKQVCEDLDECLGPPENGGCTPNSLCYNTIGSFRCGECRAGFTGDQLTGCHGTRL
CPNGQPNPCDVNGECIVERDGSISCVCGIGWAGNGYECGKDTDIDAYPDNSLMCREDNCN
QVLHSYILLPYSRLTQACIRNYFLCVFQDNCVFVPNSGQEDADRDGSGDTCDDDADNDGI
INVDDNCWLVPNVDQKNSDKDIHGDACDNCKTVQNPSQRDTDKDGLGDECDDDMDGDGLK
NVLDNCQRVPNPDQADRDNDGVGDACDSCPDVANPNQSDSDDDLVGDTCDDNIDSDGDGH
QNTKDNCPTVINSSQLDTDKDGKGDECDDDDDNDGIPDSEDNCRLVPNSDQKDSDMDKVG
DACEGDFDKDNVIDIIDHCPENAEVTLTDFRAYQTVVLDPEGDSQIDPNWVVLNQGMEIV
QTMNSDPGLAVGYKAFSGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVMWKQTEQTY
WQAAPFRAVAEPGIQLKVVKSKTGPGEYMRNSLWHTGNTTDQVRLLWKDPRNVGWKDKVS
YRWFLQHRPQVGYIRARFFEGSKLVADTGVIIDTSMRGGRLGVFCFSQENIIWSNLKYRC
NDNIPDDYQEMEGVEH
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgtgttttaaagcagcagctctatggctggtgctgcagcaactgctgctcactgtcgca
gctcagggtattgtctacgacctgctggtgtctccagactgcctgccagacttgctccaa
ggaagcctgaagaacaaaggcagggatgaggcgttcctcctctcctccttcaggctccag
aacagggcccccacctctctgttcagtgtgcttaaccccaaggacaacaacaagtacctg
gagctcagtgtgcaagccaaactgagcaaagtgacgcttcgttaccagaagaccgacggc
aggtttgggaccaccagtttcaaccacggatccctggcagatggacgggagcaccacgtc
atgatgcacgccagcggcctccagcgcggcccacctcgcctaaacatctacgtcgactgc
aggctcgctcatactgtgaatgacctgccggccgcgttcgggtcactcccacctgggccc
aacaaggtggcactgaggaccctgcagtcaagtggacaggataatctgacagacttgaag
ttggttattgaggacaccatcgacaacgtggccaccctgcaggactgcagcatggaacct
acagagtctctgcacctgctgggtttccagggaggccgggtggtacagagtcagaccacc
atgcaggagctgaagagcatgctgtctgagatgagggagctgctccacaagcagattaag
gaaacaaactttctgaggaacaccattgctgagtgtctggcttgtggactcggaggcagt
cccaccaaccctgtcccaggtccgagtcctgagcaggtggtctttccttcccatctgact
gggtgcccaccagggacctgtttcagacagaacatgtgcatttcctcagagtcagggggc
ttccagtgtgccccctgtcccgatggatacacaggagacggggttcactgtgacgacgta
gatgagtgcagctttaatccatgtttccctggcgtccgctgtgtgaacaccgctcctggt
tttcgctgtgagaaatgccctgtgggatacacaggatcagagatcaatggcgtcggagtg
tcttatgccaaatcacacaaacaggtgtgtgaagacttagatgagtgtctgggccctcct
gagaacggaggctgcacccccaactccctctgctacaacactattggctccttccgatgt
ggagagtgtagggctggtttcactggcgaccagttgacaggctgtcatggcaccagactg
tgccccaatggtcagccgaacccttgtgacgtcaatggggagtgcattgtggagagagac
ggaagcattagttgtgtgtgcggtattggttgggctggtaatggttacgaatgtgggaag
gacacagatattgatgcatatccagacaatagtcttatgtgcagagaagacaactgtaac
caggtactccattcctacatcctcctcccatactcacgtttaacccaagcttgcatcaga
aactattttttgtgtgttttccaggacaactgtgtgtttgtgcccaactctggccaagag
gatgcagacagggacgggtctggtgacacctgtgatgatgatgcagacaatgacggcatc
attaacgtagatgataactgctggctggtcccaaatgtcgaccagaagaatagtgataaa
gacatccatggcgacgcctgtgataactgcaaaacagtccaaaatccctcacagagggac
acggacaaggacggactgggagacgaatgtgatgacgacatggacggagacggcttgaaa
aatgttcttgacaactgccagcgagtcccgaacccagatcaggcagacagggacaatgac
ggcgtaggggacgcgtgtgacagctgtcctgatgtggccaaccctaatcagtcggactca
gacgatgacctagtaggagatacctgtgatgacaacatagacagtgacggtgacggtcac
cagaacacgaaggacaactgtcccactgtcatcaactcgtctcagctggacacggacaag
gatggaaagggagatgaatgtgacgacgatgatgataatgatggcataccagacagtgaa
gataattgcagactggttcccaactcagatcaaaaggactcagacatggacaaagttgga
gatgcatgtgagggagattttgacaaggacaacgtgattgacatcatcgaccactgccct
gagaacgctgaggtcacgctgaccgacttcagagcctaccagaccgtggtgctggaccca
gagggagactcacagatagatcccaactgggtggtactcaaccagggtatggagatagtc
cagaccatgaactctgatcctggccttgctgttggctataaagccttcagtggcgttgac
ttcgagggaactttccacgtgaacacagtgacggacgatgattatgctggtttcattttt
ggctaccaggactcgtcctccttctacgtagtgatgtggaaacagacagagcagacctac
tggcaggccgcgcccttcagagctgtcgctgaaccaggaatacaattgaaggtggtgaag
tctaagacaggtcctggtgagtacatgaggaactccctgtggcacacaggaaacacgacg
gaccaggtgcgtcttctgtggaaggaccccaggaatgtcggctggaaggacaaggtttcc
taccgctggttcctccagcacagaccgcaggtcggatacatcagagctcgtttctttgag
gggtccaaactggtggcggacaccggggtgatcattgataccagtatgagaggtgggcga
ctgggtgtgttctgtttctctcaggaaaacattatctggtccaatctgaagtaccgctgt
aacgacaacattcctgatgactatcaagagatggaaggggtagaacactga
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