Gambusia affinis (western mosquitofish): 122826219
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Entry
122826219 CDS
T07758
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b isoform X1
KO
K05636
laminin, beta 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04510
Focal adhesion
gaf04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122826219 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122826219 (lamb1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
EGF_2
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
122826219
NCBI-ProteinID:
XP_043963739
LinkDB
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Position
LG23:14074506..14105337
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AA seq
1776 aa
AA seq
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MRVFIFFLAALALWSPVRAQEPEFGDMCTEGSCYPATGDLLIGRAHRLTASSTCGLQEPK
RFCIVGHLEEEKKCFICDSREMYDEDNNPTSHTIENVVTTFAPNRLKTWWQSENGVENVT
IQLDLEAKFHFTHLIMTFKTFRPAAMMIERSMDFGKTWQVYQYFAQNCESAFPGISTGPM
RRVDEIICDTRYSDFEPSTEGEVIFRVLDPAFEIDDPYSLRIQNMLKITNLRIKFIKLHT
LGDNLVDFREEVTEKYYYALFDMVVRGNCFCYGHASECAPIDREQGRPEGMVHGRCVCNH
NTEGLNCERCQKFYHDLPWRPAEGRNTHSCKRCECNRHSLSCHFDLAVYISTGNVSGGVC
DDCQDNTVGRQCEQCAPFFYQHPNRDLRDPNICEPCNCDPEGSLQGGLCDSRTDVAAGLI
SGQCRCKLYVEGERCDHCRQGHYGLGQGPDGCLPCSCNSLGTMPGGNPCDSDTGQCFCRR
LVTGHNCDECLPEHWGLSNDMDGCRPCDCDQGGAINNNCDPQSGQCVCRAHMFGRLCDQV
ESGFYFISLDHYTYEAEEAQHGPGVKSVARAYPQDRSPTWTGMGFARVPEGGYIEFSVNN
IPQSMDYDILVRYEPQLPQQWEQVTVRVERPVFNPPSYTAHCSTSAQSGDEQFISLPPGS
RHVLLVSPVCLEKGLNYTIRLTFPLYSLESHIQNPHTLIDSLVLMPRVREMEMFHGTEGE
EAWDTFQRYRCLESSRSVVKSPMTDICNDYIFSISALLHKGAMTCHCDPQGSISAVCDPH
GGQCRCRPNVVGRNCDHCAPATFLFSPAGCRSCDCDPLGSVTPFCHESTGQCECVQDATG
RQCSHCLPGFWGFPQCRRCQCNGHSEYCHPQTGECQGCRDFTTGHHCERCMNGYHGDPEL
GSGSHCRPCMCPDGPRSGRQFADSCYLLPNQMVCVCSHGYKGTRCDECAPGYYGNPLIPG
GRCTPCDCNNNIDMHDPGSCDVRTGACLKCLYHTQGHTCQQCKPGYYGDATTQSCRKCMC
NSLGTTSYVCPSPDDCRCDQRNGQCSCLPNVVGQNCDRCAPNTWNLASGTGCQRCDCDPV
HAAGSSCDEVTGQCVCKPGFSGRTCRECKELFWGNPEVKCHACDCEPRGISSGQCHRATG
QCACLEGFSGHRCDHCARGYKGDFPICEPCHQCFSVWDTVVGELTNQTRRLEAQVTELLT
TGVTAPYKELISSLERNAKAVREIVLNKTASEKLENVQDLIYLITGVVSFLNGNLSTTQG
DLNHVNDGANTTETNLDVLTKEANKLEQHVQMLIQQVHNIKNANIHGAMNTISAAHMESQ
DAELRSNAATSDPGNTLEQSAALRKATEDKLSSSQREFDRKHQRNAQKLDKLSKELDKFD
LSPLSEKMCGGSGEGESCSTCGGFGCVKEDGAPHCGGEGCTGFVTTSQTALKSSQKLDQE
IQQAMEEVDKLSRMVWEANIRANEAKAKAMDVLISSNRSKERVEQSNKKLRDLIKEIRDL
LTNEKADASVIEAVANEVLALKMPTSAEKLQELTNEIREKVGTLTSVEEILSQSAKDIRG
AESLLTRAKSASEEASNVTAMAHTVKVALEKTERAQSIAMDAIQLANNNTKETTDLINSV
ESETEQSELKLSETTGRLLELEHDLGLLRQNNLEMNQKVETAERVSERAKVIAEEAQKEF
DGDLKDKLEVVEDYIEDKGESVLQARSKANELQREARELITQSNSKLQRLRELENSYEAN
QQVLEEKAEELAALEQTAQLILDEISQKVSLYSSCQ
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atgagggtcttcatcttctttctagcagctttagcgctgtggagtcctgtcagggcacag
gagccagagtttggagatatgtgcacggagggcagctgctaccccgccacgggtgacctg
ctgatcggcagggcgcacagactcaccgcctcctccacctgcggcctccaggagcccaag
cgcttctgcattgtcggacacctggaagaggaaaagaaatgtttcatatgtgactccagg
gagatgtacgacgaggacaacaaccccaccagccatacgattgagaacgtggtcaccacc
ttcgcccccaaccgcctcaagacctggtggcagtctgagaatggtgtggagaatgtaact
atccagctggacctagaagccaagtttcatttcacacacctcatcatgaccttcaagacg
tttcgtcctgctgccatgatgattgagcggtccatggattttgggaaaacatggcaggtt
tatcaatacttcgcccaaaactgtgagtctgcctttcctggcatctccactggaccgatg
cgtagagtggacgaaatcatctgtgacacccgctactcagactttgaaccatccacagag
ggagaggtgatatttcgggtgctggatcctgcttttgagattgatgacccctacagcttg
aggatacagaacatgttaaagatcacaaacctcagaataaagttcatcaagctccacacg
ctgggtgacaacctggtggatttcagagaggaagtgacggagaagtactactacgcgctc
tttgacatggtcgtccgagggaactgcttctgctacggccacgcctccgagtgcgcgccc
atcgacagagaacagggcagacctgaaggcatggttcatggccgctgcgtttgcaaccat
aatactgaggggctgaactgtgagcgctgccaaaagttttaccacgacctgccatggaga
cctgcagagggccgaaacacccactcctgcaaaagatgcgagtgcaatcgccattccctg
tcgtgtcacttcgacctcgccgtgtacatttcaaccggtaacgttagcggaggcgtgtgc
gacgactgccaggacaacaccgtgggccggcagtgcgagcaatgtgcccctttcttctac
cagcaccccaacagagacctgagagaccccaacatctgtgaaccgtgtaactgtgacccg
gagggatctctgcagggcggactgtgtgactcgcggactgatgtggcggccgggttgatc
tcgggtcagtgccggtgtaaactctatgtggagggagagcgctgtgaccactgcagacag
ggacactacggactgggacaggggccagatgggtgcctgccttgttcctgcaacagcctg
ggaacaatgccaggaggaaacccctgtgattcagacacaggacagtgcttctgcaggcga
cttgtcaccggtcacaactgtgatgagtgcctgccagagcactggggtctgtcgaatgac
atggacggttgtagaccgtgtgactgcgaccagggaggagcaatcaacaacaactgtgac
ccccagtcagggcagtgtgtttgccgggcgcacatgttcggacgcctctgcgatcaggtc
gagtccggattctacttcatctctttggatcactacacgtatgaagccgaagaggctcaa
cacggccctggggtcaaatccgttgcgagggcctatcctcaggaccgaagccccacatgg
accgggatgggctttgctcgtgttcctgaaggcgggtacattgagttcagtgtcaataac
atcccacagtcaatggactacgacatacttgttcgctacgagccgcagctgccacagcag
tgggagcaggtgaccgttcgggtcgagcgccccgtcttcaacccgccgagctacaccgcc
cactgcagcacctccgcccagagcggagacgagcagttcatctctctcccacctggatcc
aggcatgtgctgcttgtgagtccggtgtgtttggagaaaggactgaactacaccatccgc
ctgacttttccgctgtattctttggaaagccacatccagaatccacacacgctcatcgac
tctctggtgttgatgccccgggtcagagagatggaaatgtttcatgggacggagggtgag
gaagcgtgggacacatttcagcgctaccgatgtttggaaagcagccgtagcgtcgtcaaa
agcccgatgacagacatctgcaatgactacatcttcagtatctctgctctgctgcacaaa
ggagcaatgacttgccactgcgaccctcagggttccatcagcgccgtgtgcgatccccac
ggcggtcagtgtcgatgtcggcccaacgtggtcggcagaaactgcgaccactgcgctccg
gctacgttcctgttcagtcctgctggctgcagatcttgtgactgcgacccgctgggctcc
gtcactcctttctgtcacgaatcaactggtcagtgtgagtgcgtacaggatgccacggga
cgccagtgttcccactgcttaccgggtttttgggggttccctcagtgccgacggtgccag
tgtaacggccacagcgagtactgtcaccctcagaccggagagtgtcaggggtgcagagac
ttcaccaccggacatcactgtgagagatgtatgaatggttaccatggtgacccagagctg
ggatcagggagccactgtcgcccctgcatgtgtccggacggaccccgcagtggtcggcag
tttgcggacagctgttaccttctacccaatcagatggtgtgtgtgtgcagccacggctac
aaaggaaccaggtgtgatgagtgcgccccgggttattatgggaaccctctcattcccggt
ggccgctgcacgccctgcgattgcaacaacaacattgacatgcatgacccaggatcctgc
gacgtccgcacaggtgcctgtctcaaatgtctgtatcacacgcagggccacacatgccag
caatgcaaaccgggatattacggcgacgccaccacacagagctgccggaagtgcatgtgc
aactcattggggacgacatcttacgtctgtccatcccctgacgactgccgctgtgaccag
cgtaatggccagtgttcctgcctgcccaacgtggtcgggcagaactgtgaccgctgcgct
cccaatacgtggaacctcgccagcggaacgggctgccaacgctgcgactgcgaccctgtc
cacgctgccgggtcttcctgcgatgaggttacgggtcagtgtgtgtgcaaaccgggtttc
agtggcaggacgtgtcgggaatgcaaagagctgttctggggaaatccagaggtcaaatgt
cacgcttgtgactgtgaacccaggggaatctccagcggtcagtgtcatcgagccacaggg
caatgtgcgtgcttagaaggcttctccggccatcgctgtgaccactgcgccaggggctac
aagggggacttccccatctgcgaaccctgccaccagtgcttctccgtctgggacaccgtc
gtaggcgagctgaccaatcagactcgtcgtctggaggcccaagttaccgagctgctgacc
actggagtgacggcgccatacaaggagctgatcagcagtctggagagaaacgccaaggcc
gtcagggagatcgtgctaaacaagaccgcttcagagaagctggagaacgtccaagacctg
atctatctgatcactggagtggtgtcgttcctcaacgggaatctgagcacaacacaggga
gacctgaatcatgttaacgatggagcaaacacaacggaaacaaacttggatgtactgacc
aaggaggccaacaagctggagcaacacgtccaaatgctcatacagcaagtccacaacatc
aagaacgccaacattcatggagccatgaacacaatttctgctgcacacatggagtcccaa
gatgcagagcttcgctccaatgccgcaaccagtgatcctggcaacactctggagcagtca
gctgcattacggaaagccactgaggacaaactgagcagtagtcagagggagtttgaccgg
aaacaccaaagaaatgcgcagaagctggacaagctgtccaaagagttggacaagtttgac
ttgtccccgcttagtgagaagatgtgtggcggttcaggtgaaggggagagctgctccacc
tgtggcggattcgggtgcgtcaaggaggacggagcgccccactgtggaggggagggatgc
accggttttgtcacaacgtctcaaactgccctgaaatcctcccagaagctggaccaggag
atccagcaggccatggaggaggtggacaagctctccaggatggtttgggaagcaaacatc
cgcgccaatgaggccaaagcgaaggcgatggatgtgctgatctcatccaatcgcagcaaa
gagagagtagagcagagcaacaagaaactccgtgacctcatcaaagagatccgcgacctt
ttgaccaatgagaaggcagatgcttctgtgatcgaggcggtggccaatgaggtgctggct
ctgaagatgccgacatcggcggagaagctgcaggagctgaccaacgagatcagggagaag
gtcggcactctgaccagcgtggaggagatcctcagtcagagcgccaaggacatccgaggt
gcagaatctctcctgactcgggccaaatcagcaagtgaggaggcatcaaatgtgacggcg
atggcgcacacagtgaaggtggcgttggaaaagactgagcgtgctcagagcatcgccatg
gacgccattcagttggccaataacaacacaaaagaaaccacagacctgatcaactctgtc
gaatcagagacggaacaatctgagctgaagctcagtgagaccactggtcgtctgttggag
ctggagcatgacctgggcctgctgaggcagaacaacctggagatgaaccagaaggtggaa
acggccgagcgggtttccgaacgggccaaagtgatcgcagaagaggctcaaaaggagttt
gatggggacctaaaggataaactggaggtggttgaagactatatcgaggacaaaggggag
tcagtgctgcaggcgaggagcaaagcaaatgagctgcagcgagaagccagagagctgatc
acacagagcaacagcaagctgcagagactaagagagttggagaactcctatgaagccaac
cagcaggttctggaggagaaagcagaagagctggccgcactggagcaaacagcccagctc
atcctggatgagatcagccaaaaagtgtcgctttacagcagctgtcagtga
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