Gambusia affinis (western mosquitofish): 122826301
Help
Entry
122826301 CDS
T07758
Symbol
apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122826301 (apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122826301 (apex1)
Enzymes [BR:
gaf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
122826301 (apex1)
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
122826301 (apex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
122826301
NCBI-ProteinID:
XP_043963933
LinkDB
All DBs
Position
LG23:complement(3915299..3918356)
Genome browser
AA seq
310 aa
AA seq
DB search
MKRGKKTDDTSAEGENDTGSATAKKAKKSKEPEAPVLYEDPPDKMTSKDGRSANMKITSW
NVDGLRAWVKKNGLDWVREEAPDVLCLQETKCSEKALPAQITSMPEYPHKYWAASNDKEG
YSGVAMLCKTEPLKVTYGIGKEEHDKEGRVITAEFPNFYLVTAYVPNASRGLVRLDYRKT
WDVDFRAYLSELDIQKPLVLCGDLNVAHQEIDLKNPKGNKKNAGFTPEEREGFSQLLAAG
FVDSFRELYPEQANAYTFWTYMMNARSKNVGWRLDYFLLSSSLLPGLCDSKIRNKAMGSD
HCPITLHIAV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaggcaagaagacagatgatacgtctgcggaaggggagaatgacacaggctct
gctactgcaaaaaaagccaagaaatccaaggaaccagaagccccagtgctgtacgaagac
ccccctgacaaaatgacgagcaaagatggccgtagcgccaacatgaagatcacctcctgg
aacgtagacggtctcagggcgtgggtgaaaaagaacggactggattgggtgcgtgaggag
gcgccagatgtcctgtgcctccaggagacaaagtgttcagagaaagcccttcctgcccag
atcacgtccatgcctgagtacccccacaaatactgggctgcatccaatgacaaggagggc
tacagtggtgtagccatgctgtgcaagactgaacctctcaaagtcacttatgggattggc
aaagaggagcatgataaggaggggcgcgtcatcacagccgagttcccaaacttctacctg
gtgacggcctacgtcccgaacgcgagcagaggcctcgtccgccttgattaccgcaaaacc
tgggacgtggacttccgagcttacctgagcgaacttgacatccagaagcccctggtgctg
tgcggcgatctcaacgtcgcgcaccaggagatcgacctgaagaacccaaagggcaacaag
aagaacgcgggcttcaccccggaggagcgcgaaggcttcagccagctgctggcggccggc
ttcgtggacagcttccgtgagctctacccggagcaggccaacgcctacaccttctggacc
tacatgatgaacgcccgctccaagaacgtgggctggcggctcgactatttcctgctctcg
tcttccctgctgccaggcctgtgcgatagtaagatccgtaacaaggcaatggggagcgac
cactgccccatcactctccacatagctgtgtga
DBGET
integrated database retrieval system
