Gambusia affinis (western mosquitofish): 122826428
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Entry
122826428 CDS
T07758
Symbol
cltcl1
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04142
Lysosome
gaf04144
Endocytosis
gaf05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122826428 (cltcl1)
04142 Lysosome
122826428 (cltcl1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
122826428 (cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122826428 (cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gaf04147
]
122826428 (cltcl1)
Membrane trafficking [BR:
gaf04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
122826428 (cltcl1)
Exosome [BR:
gaf04147
]
Exosomal proteins
Proteins found in most exosomes
122826428 (cltcl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
capSnatchArena
Gp18_dom_I
RtcR
RMC1_N
Motif
Other DBs
NCBI-GeneID:
122826428
NCBI-ProteinID:
XP_043964197
LinkDB
All DBs
Position
LG03:complement(16485668..16522425)
Genome browser
AA seq
1690 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGVNPANIGFSYLTMESDKFICIREKVGEQNQVVIVDLSDPNN
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTTTEEVMFWKWISVNTV
ALVTDTAVYHWSMEGDSQPTKVFDRHASLAGCQIIHYRTDEQQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAAFGEFKVEGNAKPSTLFCFAVRSQAGGKLHIIEVGQPAAG
NQPFAKKAVDVFFPPEAQTDFPVAMQIGNKHGVIYLITKYGYIHLYDLESGVCIYMNRIS
AETIFVTAPHEATSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLALRMAVRSNLVG
AEELFGRKFNTLFAQGSYSEAAKVAASAPKGILRTAETIRKFQSVPAQPGQASPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKASDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWVFLLRNVMRVNPDQGLQFAQMLVQD
EEPLANINQIVDVFMEGNLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VDDSLECLRAMLSANIRQNLQLCVQVASKYHEQLGTQALVELFESFKSYEGLFYFLGSIV
NFSQEPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLIMVVRGQ
FSTDELVDEVEKRNRLKLLLPWLESRILEGCEEPATHNALAKIYIDSNNTPERFLKENPF
YDSAVVGRYCEKRDPHLACVAYERGQCDLDLIKVCNENSLFKSEARYLVRRKDPELWAKV
LEEDNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT
SAIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLHRDLVKEAIDSYIKAVDPSAYME
VVNAASKNNNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFVSGPNNAHIQ
QVGDRCYEEGMYEAAKLLFNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFA
CVDGEEFRLAQICGLHIVIHADELEDLISYYQDRGYYEELIALLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQSHLWAELVFLYDKYEEYDNAVITMM
NHATDAWKEGMFKDIIAKVANVELYYKSLSFYLEFKPLLINDLLSILSPRLDHNRAVSFF
SKMNQLKLVKPYLRSVQNHNNKAVNEALNNLLTEEEDYQSLRASIDAYDNFDTIDLAQRL
EKHELIEFRRIAAYLYKRNNRWRQSVELCKKDKLYKDAMLFAAESKDAELAETLLQWFLE
EDRKECFAACLFASYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDEFAAKVMV
DKLEEAESQRKTEDDGKEPQPMVFGQQLMLTAAASPVAAQPAYPAYGYPAAAAPPAAAGY
PAQPAYGFNM
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatattaccaatacggtttcaggaacatctccagttgcagaacctgggtgtg
aacccagctaacatcggcttcagctacctgaccatggagtcagacaagttcatctgcatc
cgggagaaagtgggcgagcagaaccaggtggtgatcgttgacctatccgaccccaacaac
ccaatcaggaggccgatctccgctgacagcgccattatgaaccctgcaagcaaggttatc
gcgctaaaagacgctgccaaaaccctgcagatcttcaacatcgagatgaagagcaagatg
aaggctcacaccaccacggaggaggtcatgttctggaagtggatatctgtgaacaccgtt
gccttggtgacggacacggcggtctaccactggagcatggagggcgattcccaaccgacc
aaagtgttcgatcggcacgccagtctggcgggttgtcagatcatccactacagaaccgac
gagcagcagaagtggttactgctgatcgggatttctgcacagcaaaatcgcgtagtcgga
gcgatgcagctgtactcggtcgacaggaaagtctcccagcccatcgagggccacgccgct
gccttcggggagttcaaagtggagggaaatgccaaaccttccacgttgttctgctttgct
gtgcgttcacaggcgggaggaaagttgcacatcattgaagttggtcagcccgctgcagga
aaccagccatttgctaagaaagcagtggatgtgtttttccctccagaggcccagacagac
ttccctgtagctatgcagattggaaacaagcatggtgtgatatatttgatcacaaaatat
ggttacattcacctgtacgacctggaatctggagtgtgtatatacatgaaccgaatcagt
gcagagactatctttgttacggcccctcatgaggccacctcagggatcatcggcgttaat
aagaagggacaggtcttgtcagtgtgtgttgaagaagaaaacatcgtcaactatgccaca
aacgttctgcagaaccctgatcttgccctgaggatggccgtgaggtctaatcttgttggg
gctgaggagctttttggcagaaagtttaatactctgtttgcccagggaagttactcagag
gctgcaaaggttgctgcatctgcaccgaagggtatcctccgaacagcagaaaccatacgc
aagttccagagtgtcccagcccagcccggtcaagcctcacctctgctccagtacttcggg
attcttttggaccagggccagctcaataagtttgagtctctggagctgtgcaggcccgtc
ctgcagcaaggccgtaagcagctactggagaaatggctgaaggaggacaagctggagtgt
tcagaggaactgggcgatctggtaaaggcctctgacccaacgttagctcttagtgtttat
ctcagagcaaatgtccccaacaaagttattcagtgctttgcagaaacaggacagttccag
aagatagtgctgtatgccaaaaaggtgggatacaccccagactgggtgttcttgttaagg
aacgtaatgcgagtcaacccagaccaaggactgcagtttgcccaaatgcttgtccaagat
gaggagccgctggccaacatcaaccagattgttgatgttttcatggagggcaacctgatt
cagcagtgcacttccttcctgttggatgctctgaagaacaaccgtccagctgaaggacac
ttacagacacgtctgcttgagatgaacctgatacacgctccccaggtagcagatgcgatc
ctggggaaccagatgttcacacactatgaccgggcccacgtcgctcagctgtgtgagaag
gcagggctgctgcagagggcactcgaacactacaccgacctgtacgatatcaaacgagcc
gtggtgcacacacatctgctcaaccctgagtggctggtgaactttttcggctccttgtca
gtcgacgactctttggagtgtttgagggccatgttgtcggctaacatcaggcagaacctg
cagctgtgtgtgcaggtagcatcaaagtatcatgagcagctgggaactcaggcgctagtg
gagctcttcgagtccttcaagagttatgaaggtctgttttacttccttggctcgatcgtg
aatttcagccaggaacccgacgttcacttcaaatacatccaggctgcttgtaagacgggt
cagatcaaagaagtggagagaatatgtagagagagcaactgctacgacccagagagggtt
aaaaacttcctcaaggaggcgaagttaacagaccagcttcccctcatcattgtgtgcgat
cgctttgactttgtccatgatctggtgctctacctgtaccgcaacaatctgcagaaatac
atagaaatctatgttcagaaagtgaaccccagtcggttgcccgtggtgatcggtggtttg
ttggatgtggactgttcagaggacgtcatcaagaacctgatcatggtggtcagaggacag
ttttccaccgatgagctggtggacgaggtggaaaagaggaacaggttgaagcttctgttg
ccatggctggagtcgcgtattctcgagggatgtgaggaaccggctacccacaatgcactg
gccaagatctacatcgacagcaacaacacgccggagcgcttcctgaaggagaacccgttc
tacgacagcgccgtggtcggccgctactgcgagaagagagaccctcacctggcctgcgtg
gcgtatgagagagggcagtgcgacctggacctcatcaaagtttgcaatgaaaattcatta
tttaagagtgaagctcggtatcttgtgcgacgaaaagatccggagctctgggccaaagtg
ttggaggaagacaacccgttcagaagacaactcatcgatcaggtggtgcagacagctctg
tcggagacccaggacccagaggaggtgtcggtcacagtcaaggcctttatgacggcagac
ctaccaaacgagctgatagagttgctggagaagattgttcttgataactctgtcttcagc
gaacacagaaacctccagaatctgctgattttaacggctatcaaggccgaccgcactcgt
gtgatggagtacatcaacaggctagataactacgacgctcctgacatcgctaacatcgcc
attagcaatgagctcttcgaagaggcgtttgccattttcaagaagtttgatgtcaacacc
tcagccattcaggttttgattgagcacatagggaacttggaccgagcctatgagtttgca
gagcgctgtaacgagcctgcagtgtggagtcagttagccagagctcagctgcacagggac
ctggtcaaggaggccatcgactcctacatcaaagccgtggatccatcagcgtatatggag
gtggtcaatgcagccagcaagaacaataactgggaggatttggtgaagttcctgcagatg
gctcgtaagaaagccagagagtcgtatgtagagacggagctgatttttgctctggctaaa
acgaaccgcctggctgagctggaagaatttgtcagtgggcccaataatgctcacattcag
caggtgggagacagatgttacgaggagggaatgtacgaagcggccaaacttttgttcaac
aatgtgtccaactttgcccgacttgcgtctacattagtccaccttggggagtaccaggcg
gccgtggacagcgccaggaaagcaaacagcactcggacgtggaaggaggtttgctttgcg
tgcgtcgacggcgaggagttccggttggcgcagatctgcggccttcacattgtgatccac
gccgacgagctggaggacctgatcagctactatcaggaccgcgggtactatgaggagctc
atcgctctgctggaggcggcgctgggcctggagcgcgcccacatggggatgttcacagag
ctcgccatcctctactccaagttcaaacctcagaaaatgagggaacatctggagctcttc
tggtcacgagtcaacatcccaaaggttcttcgtgcagctgagcaatctcatttatgggca
gagctggttttcctttacgataaatacgaggagtacgacaacgccgtcatcactatgatg
aaccatgcaacagatgcatggaaagaaggcatgttcaaagacataattgccaaggtcgcc
aacgtggagttatactacaaatctctttctttctacctggaattcaaacctctgctcatt
aatgacctgctgtctattttgtctccccggttggatcataacagagccgtcagctttttc
tctaagatgaatcagctaaagttggtcaagccctacttgagatcggtccagaatcacaac
aataaggccgtcaatgaagcgctcaacaacttgctaacggaggaggaagactaccagagc
ctcagagcctccatcgatgcttacgataactttgacaccatcgacttggctcagaggtta
gagaagcacgaactgatcgagttcaggcgtatcgctgcttatctgtacaaaagaaacaac
cgctggaggcagagtgtggagctttgtaagaaggacaagctgtacaaggatgccatgctc
ttcgccgcagagtcaaaggatgccgagctggcagagactctactgcagtggttcctggag
gaagacaggaaggagtgctttgctgcctgcctgttcgcctcctacgacctcctccaccct
gatgtggtgctggaactggcctggaggcacaacataatggactttgccatgccctacttc
attcaagtcatgagagagtacctcactaaggttgatgaatttgcagcaaaggtgatggtg
gacaaactggaggaggcagaaagccagaggaaaactgaggacgacgggaaagagcctcag
ccgatggtgtttggccagcagctgatgttgactgcagctgcttctcctgtggcggctcag
ccagcgtaccctgcttacggctaccccgccgccgccgctcctcccgctgccgcaggttac
cccgcccagccagcctacggcttcaacatgtaa
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integrated database retrieval system
