Gambusia affinis (western mosquitofish): 122826438
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Entry
122826438 CDS
T07758
Symbol
trim24
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gaf01001
]
122826438 (trim24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122826438 (trim24)
Enzymes [BR:
gaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122826438 (trim24)
Protein kinases [BR:
gaf01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
122826438 (trim24)
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122826438 (trim24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-RING_5
zf-C3HC4_2
zf-C3HC4
zf-RING_2
PHD-1st_NSD
PML_CC
FemAB_like
PRANC
ANIS5_cation-bd
Motif
Other DBs
NCBI-GeneID:
122826438
NCBI-ProteinID:
XP_043964215
LinkDB
All DBs
Position
LG23:6830492..6842119
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AA seq
1042 aa
AA seq
DB search
MDESADNDDLVIIVENEAESLPAGEEKVKQLGAFGLMDTCPICKLSFHNREPKLLPCLHS
FCRRCLPPPLRSAEPRRDPHGPVGSIRCPVCGQECWEVDVLDNFFVKDSAEVPSSTVEKT
SQVCMSCDDNTEATGYCVECVEFLCLTCIEAHQRVKFTRDHTIRQKEEMSPEALGVSTQK
PVFCDVHKQEPLKLFCETCDRLTCRDCQLLKHKDHNYQFLEDAYRNHKQYLETMTLQLQE
KRKAIEEVSSCINSGLQQVEENRKAVTNEIKKSICNLIMEINRKGKILINQLEALTKDHD
LALKKQQDDINALTRQLDHVISFTKWATASHSGTALLYCKRLILYQIHYLMRTSYNPSIV
PQSSVRFQCRSGFWASNVDLGSLVVERCPGRPPIPSHQQGPRLEAPTGGLSLAAAQQRQS
TLAQLQMQVDKLSHHPQRQPPPNHWSWYQNVRLPAPPGPPPPTRPIHGGSSPSQAPPSLV
QPGRRYGNSHPNPRSPPASMIQSPGYGASQSLRELIHSSAFPPKPIDISQGAPRFPQPLS
APQAALHQRCMPESSLLKRSEGGLPVPTVSISVPKPSMGLGLAAGSSEKSSSSFGHVTGQ
GGQYSPLAKPSSSDRTAGSSSWRSAPPSAPAPKRRRRMSPGPVIVIKDEPEDEDEVRFVQ
SSSGSSLPDSSTGAQSEPRPPPKGLVASTTPASTSVNQCNQTQSQPDPEKKPVPEDDPNE
DWCAVCQNGGELLCCDKCPKVFHLSCHIPALNESPSGEWFCSFCRDPESPEMEYDCDRGR
GPGSENFPSVDKRKCERLLLRLFSNDFSTDFQQPASPSETRRYKELIKTPMDLTIVKKKL
QSKEDECYGSPEEFVSDVRLIFFNCAKYYKATSEVGSAGLYLEDYFEEQLKLVYPDKVFP
GGREEQMIPPLEDEIEEEEEQPTEPSAAAVEDKKPQSPAGDADGGMVPKEEPMAPAESEN
LEERSEVSQKETEEGTADVEGGVPPVDEAKQDERVDGEQAESRHSCDTETKDGGEDEKAQ
PPADDAEDTPDTSENPASEQQG
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaagtgccgataacgacgacctcgtcatcatcgtggagaacgaggctgaaagt
ttgcccgcaggggaagagaaggtgaaacagttgggcgctttcgggctcatggacacatgt
cccatctgcaagctgagtttccacaacagggagcccaaactgctgccgtgtctgcactca
ttctgccggaggtgcctgcctcccccgttgaggagcgccgaaccgaggcgggacccgcac
ggtccagtcggttccattcggtgtccggtgtgcggacaggaatgctgggaggttgacgtg
ttggacaacttctttgtcaaggactccgctgaggtgcccagcagcacggtggagaaaacc
agccaggtgtgcatgagctgcgacgacaacaccgaggcgacgggctattgcgtggagtgc
gtggagttcctgtgcttgacgtgcatcgaggcgcaccagagggtgaagttcacccgagac
cacaccatacggcagaaggaggagatgtctccagaggctctaggcgtgtccacgcagaag
cccgtcttctgcgacgttcacaagcaggagccgctgaagctgttctgcgagacgtgcgac
cggctcacgtgtcgagactgccagctcctcaaacacaaggaccacaactaccagtttttg
gaggatgcgtacaggaaccataagcagtatctggaaaccatgacgctgcagttgcaggag
aagagaaaagccattgaagaagtgtcgagctgtatcaactccggactgcagcaagtggag
gaaaaccggaaagctgtgacaaacgaaataaagaagtccatctgtaacctgatcatggag
atcaacaggaagggaaagatcctgataaaccagctggaggcgctgactaaggaccacgat
ttggctctgaagaagcagcaggatgacatcaacgccctgacgaggcagctggatcacgtg
atcagcttcaccaagtgggcgacggcgagtcacagcggaacggctctgctgtactgcaag
agactgatcctctaccagatccactacctgatgagaacgagctacaacccgtccatcgtc
ccgcagagctccgttcgcttccagtgccggtcgggcttctgggcctcaaacgtagacctc
ggttcgctggtggtcgagcgatgtccagggaggccacccatccccagccatcagcagggc
cccagactggaggccccgaccgggggtctttccctcgcagcagcacagcagcgacaaagc
actctagctcagctccaaatgcaggttgacaagctctcccaccatcctcagaggcagccc
cctcctaaccactggtcctggtatcagaatgtgaggctcccagctcctccaggcccccct
ccacctaccagacccatccatggggggtcttctccctcccaagctccccccagcttggtg
cagcctggacggaggtacgggaacagccatccaaaccctcggagccctccggcgtccatg
attcagagcccaggctacggagcttcacagtctctacgagaactaatccacagctccgcg
ttcccccctaaacccatcgacatatcgcagggcgctccccgcttcccgcagcctctgtct
gctccccaggccgctctgcaccagagatgcatgccggagtcgtccctcctaaagaggagc
gaaggcggtctgcccgtcccgaccgtcagcatctccgtcccaaaacccagcatgggtttg
ggcctggcagccggaagctcagaaaaaagcagcagctcgtttggtcatgtgacaggtcaa
ggagggcagtactcgccgttggcaaagccgtcctcttctgacagaaccgcggggtcatcg
tcctggaggtcagcgcctccatcagccccggcgccgaagcgaagaaggaggatgtctccg
gggcccgtaatcgtcatcaaggatgaacccgaggacgaggacgaagtccgttttgtgcaa
tccagcagcgggtcgagcctaccggacagcagcaccggcgctcagtcggagccccggccg
ccgccgaagggactggtggcgtccaccaccccggcgtccacctccgtcaaccagtgcaat
cagacccagtcgcagcccgacccggaaaagaaaccggtgccagaggacgaccccaacgag
gactggtgcgccgtgtgtcagaacggcggggagctgctctgctgcgacaagtgccccaaa
gttttccacctttcctgccacattccggctctgaacgagtcgccgagcggcgagtggttt
tgctctttctgtcgggacccagagtcaccagagatggagtacgactgcgacagagggcgt
gggccgggctccgaaaacttcccctctgtggacaaaaggaaatgtgagcgactgctgctc
cgcttgttcagtaacgacttcagcacagacttccagcaacctgcgtctccatcggaaact
cggcggtacaaggagttaataaagacgccgatggatttgacgatagtgaagaaaaaactg
cagtcgaaggaggacgagtgctacggaagcccggaggagttcgtttctgacgtcagactc
atatttttcaactgtgccaagtattacaaggcgacatccgaggttgggagtgccggcttg
tacctggaggattacttcgaggagcagctgaagctcgtctacccggacaaggtcttccca
ggagggagagaggagcagatgatccctcctttagaggacgagatcgaagaagaggaggag
cagccgacggagccgagcgccgccgcagtggaggacaagaaaccacaaagccctgcagga
gacgcagacggcggaatggttcctaaggaagaaccgatggctccggcagagagcgagaac
ctggaggaaaggagcgaagtgagtcaaaaggagacagaggaagggactgcagacgtagag
ggaggcgttcctcctgtagacgaggcgaagcaagatgaacgcgtcgatggtgagcaggcg
gaaagccgccactcttgtgacacggaaactaaagatggcggcgaggacgagaaggcgcag
ccgcctgcggacgacgccgaggacacaccggacacttcggagaatccagcctcggagcag
cagggatag
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