Gambusia affinis (western mosquitofish): 122826473
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Entry
122826473 CDS
T07758
Symbol
cdhr5-rs
Name
(RefSeq) cadherin-related family member 5 isoform X1
KO
K16505
cadherin-related family member 5
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gaf04515
]
122826473 (cdhr5-rs)
Cell adhesion molecules [BR:
gaf04515
]
Cadherins
Cadherin related
122826473 (cdhr5-rs)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
122826473
NCBI-ProteinID:
XP_043964329
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Position
LG23:complement(19870786..19879810)
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AA seq
673 aa
AA seq
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MSRMFCLLLWQLLLRVSCHVAAGKNIYYFNSYWCSFSTLTADSVWSSASLCTVGSNIFAS
VRENSPAGQFISHISIRSDPGANTVRLCLTGPNANWFYLEGRTIRLNSSASRVLDREVLG
PFLIAELTCYEDDIKQSHYRILVEILNENDNKPKFLEETIQPFSISEVVAVNSVVFTVKA
VDSDGDMISYIIDQSSEDAWFFRIDLPNSGKVVLSKPLDYESRTRLQIIMWAQETNTEEK
FNISTILTIDIEDVDDQYPHFLPCTPVSPRVPICMNPTYTANITRKQQDSVLEFSPGPIR
ARDGDRGINAPLMYTILSGDNHGKFVMDNRTGEIRLARAVDEHQPGANFTLTVMVCQVED
RLKYSVATVVVRVLSENSFPPVFNTTTFKGFIIQSSSPASIVSTYGNQVLQVQVSDQDFS
DQGVNPNIRFFLHPTSRLYQVTQEGVLIARTDQLRAFDRHILQVVARDEESGEEASASVD
IEVLQRGQAVPHGAFTEQQLFGDVDSRLAGGIAALILLTFLSAFLFLLLRFVRRRRPQEA
DVLPATTTLKHHKVSSRSPGFMDEALHRQASLRSGSFHGRQGLYIRRQSLPPPTSSSSAA
DSRTRPQSPSSEVSLSDPAGRCRFQTDLFVMVEKPAGVASGWERSPDVTAGLQLHAEMPQ
SDKDVNTDQSRDT
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggatgttctgtctgctgctgtggcagctacttctcagagtttcctgccatgtt
gctgcaggtaagaacatttactacttcaatagttattggtgctccttcagtacattaact
gctgattctgtttggtcctcagccagtctgtgtacggtcggctccaacatctttgcgtct
gtcagggagaacagtccagcaggtcagttcatctcacacatcagcatcagatcggaccca
ggagccaacaccgtgcgtctatgcctgactggaccgaatgccaactggttctacttagaa
ggtcgaaccatcagactcaactcgtccgcatccagagtcctggaccgagaggttctgggt
ccgtttctgatcgctgagctcacctgttatgaggacgatatcaaacaaagccactacagg
attctggtggagattttgaatgaaaatgacaacaaaccaaagtttctggaggagaccatc
caaccgttcagcatcagcgaggttgtagcagtaaactctgtggttttcactgtgaaggct
gtcgactcagatggagatatgatcagctacatcatcgaccaatcctcggaagatgcatgg
ttcttcaggatcgacttgcccaacagtgggaaagtggtgctcagcaaacctctggactat
gaaagcagaactcgcctacagatcatcatgtgggcacaggaaacaaacactgaggagaag
ttcaacatctccactattctgaccatcgacattgaggatgttgacgaccagtatcctcac
ttcctgccctgcacacctgtgtccccaagagtcccgatctgcatgaacccaacctataca
gcaaacatcacaagaaaacagcaggactcggttctggagttttctcctggtccaatcaga
gccagggatggcgatcgaggcatcaacgctcctctcatgtatacaatcctgtcaggtgac
aatcatggcaagtttgtgatggacaacaggacaggtgagatccggctagccagagctgta
gatgagcatcagccaggagcaaacttcaccctcaccgtcatggtgtgtcaggtagaggac
cggttaaagtacagcgtggccacagttgtggtcagggttctcagtgagaactccttcccg
ccggtctttaacacaaccaccttcaaaggcttcatcatccagagttcaagccccgcctcc
atcgtttccacctatgggaaccaggtgttgcaggtccaggtatctgaccaggatttctct
gatcagggggtgaatccaaacatccggttcttcctccatccgacgtcccgactgtaccag
gtgacccaggagggggttctgatcgcccggacggaccagctgagggcctttgacagacac
attctgcaggttgttgccagggatgaagaatcaggagaggaagcttcagcctcagtggac
attgaagtcctgcagcgaggacaggcagtgcctcatggtgcgttcacagagcaacagctg
tttggggatgtggacagcaggttggcaggaggaatcgcagcgctgatcctgctgacgttt
ctgtctgccttcctgtttcttctgctccgattcgtgcgaaggcgccggccgcaggaagct
gatgtcctgccagccaccacaaccttaaagcaccataaggtgagttccaggtctccaggc
ttcatggacgaggctctccatcgtcaggcgtccttgcggtcgggcagcttccacggcaga
cagggtctctacatccggaggcagtctcttcctcctccaacttcctcctcctcagcagca
gacagcaggaccagacctcagtctccgtcctcggaggtctctctcagcgatccggcaggc
cgctgccgcttccagacggatctgttcgtcatggtagagaaacctgcaggagtggcgtcc
ggctgggagaggtcacctgacgtcaccgcaggcctgcagctccatgctgagatgccccag
agtgacaaggatgttaacactgaccaatcaagggacacttga
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