Gambusia affinis (western mosquitofish): 122826543
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Entry
122826543 CDS
T07758
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122826543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122826543
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122826543
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122826543
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
122826543
NCBI-ProteinID:
XP_043964473
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All DBs
Position
LG23:16964134..16977238
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AA seq
532 aa
AA seq
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MFGATRKKFMEGGIESEYASDDSSLYYNHTSMFAPHRADKDMLSSSSSSSQLSQLGASLY
APQSALGFPIRGINSSAAPQLSRSSLTQPAGQLSNHTSTPNSGPLHTPSSPNRASIMPLT
SSRSVLNHNQQVGGPTGQTGGGERGGGGTGRSGTMGSPSRSSPSIIGMPKQQQARFSFNR
NPGFNMSNSLTSNIFNGTDGSENVTGLDLSDFPALADRSRRDGSSNPTPQLNPLAGRAPY
GNTQTIQNILGMVTKPSSEQSQDFSIHNEDFPALPGPNYQTKDPSSNSDDKTNLNSSGKA
SSSADGPKFPGDKSSAPSNNNQQKKGIQVLPDGRVTNIPVGMVTDQFGMIGLLTFIRAAE
TDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIR
DKLAAIKLSRYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPT
LKTNAYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHVPSTFNYNPAQQAF
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctaccaggaagaagttcatggagggggggatcgagagcgagtacgcttcg
gacgactccagcctctactacaaccacacgtccatgttcgctcctcaccgggccgataaa
gatatgctgtcgtcttcctcctcatccagtcagctgtcgcagctgggagccagtttatac
gccccacagagtgctctgggtttccccatccgtgggatcaacagcagcgcggcgccgcag
ctcagtcgaagctcgctgacccaacccgccggccagctctccaatcacaccagtactccc
aactctggaccgctgcacacgccctcgtcgcccaacagggcctccatcatgcccttaacc
agcagccgcagcgtcctgaaccacaaccagcaggtgggcggtcccacggggcagacgggc
ggaggagagcgaggcggcggcggcacagggcggagcggcaccatggggagtcccagcagg
tcgtctcccagcatcatcggcatgcccaaacagcagcaggcgcggttctccttcaacagg
aatccagggttcaacatgagcaactccttaaccagcaacattttcaacggcacagacggc
agtgagaatgtgacggggttggatctgtccgacttcccggcgttggcggaccggagccgg
agagacgggagttcgaacccgaccccgcagctgaacccgctggccggccgggcgccctac
ggtaacacacagacgatacagaacatccttggcatggtaaccaagccatccagcgaacag
tcgcaggacttttcgatccataatgaagatttcccagctctccctggtccaaactaccaa
actaaagatcccagcagcaacagcgacgacaaaacgaacctgaactcgtcgggaaaggcg
tcttcgagcgccgacggtcccaagttccccggcgataaaagctcggctccgagcaacaac
aaccagcagaagaaaggcatccaggttcttcccgatggccgagtgaccaacattcccgtc
ggcatggtaacggaccagtttggaatgatcggcttgttgacgttcatccgggcagcagag
acggatcctggcatggttcacctagcgctgggctcagacctcaccacactgggcctgaac
ctcaactcacctgagaatctgtatcctaagtttgcgtctccgtgggcgtcggcgccgtgt
cggccgcaggacattgactttcacgtcccgtcagagtatctaaccaacatccacataagg
gacaagctagcagccatcaagttgtctcggtacggagaagatctgctgttttatctctac
tacatgaacggaggagacctgctccagctgctggctgcagtagaactttttaaccgggac
tggcggtatcataaagaggagcgggtttggataacgcgggcccctgggatggagcccacg
ttaaagaccaacgcctacgaaagagggacctactacttcttcgattgtctcaactggagg
aaggttgccaaggagtttcatctcgaatatgacaaactagaagagcgacctcatgttccc
tccactttcaactacaatcctgcccagcaggccttctga
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