Gambusia affinis (western mosquitofish): 122826579
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Entry
122826579 CDS
T07758
Symbol
pus7l
Name
(RefSeq) pseudouridylate synthase 7 homolog-like protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gaf03016
]
122826579 (pus7l)
Enzymes [BR:
gaf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
122826579 (pus7l)
Transfer RNA biogenesis [BR:
gaf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
122826579 (pus7l)
Prokaryotic type
122826579 (pus7l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
122826579
NCBI-ProteinID:
XP_043964559
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Position
LG23:8537389..8542006
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AA seq
682 aa
AA seq
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MTESPVKVTMKGDEPVNVPAYFLSKHEGFVGSIKTFIEDFVVTEIDINGQKVKTAQAVQT
AGCTSSEENQTNTELKENLYCSGSQDADLSSDWGQGSDTPLPALGSFDLDVILGPSVSED
LEQFVMTLREKRPSGPELSLGSFSDKHQRANVHRAVRHRFPFLLTVTIQPEIRVREDPDY
RELARLVREEEAEDFFRFIDAKVRGSSYTFGPDDSKEHRTAVHHFLNRRFGKLVETKSFS
SQGRTSISVRLREHGKPKKRTAEERKEEDIYTAFTLCKENLETLEAISYMAATLGVLPSD
FTYAGIKDKRAVTYQSMVVKKVSPQRLKEKVAEFEKRGMRLSQIRSVNEPLKLGRLRGNH
FDLVVRKLRPHGASDEHLSGADGDTRLAALVKEAVENVKRRGFVNYYGPQRFGSGQSVLS
DRVGLALLKEDMVSAVRLFFSPEDSDDPHSLAKRHFLQSDNPKESLALMPLSKPRERLML
RALNRYGTGPNGCVQAWLSLPHSIRVFYPHAYCSRVWNDAAAHRLSALGLGVRQGDLVWT
QTGQNRTEDTGAVISPQIHVVTREEEQAGVYTLGQVLLPMPGNSVKYPENAMRAWYQERL
AGDGLAESRFRVSSLKLNLPGCYRPLLAIPHNLSYQLHRAACSHGAKKQESDPGSLTLSL
NFDLDSSCYATICLREIMKCET
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgacggagtcaccagtaaaggtgacaatgaagggcgatgagcctgtaaatgttcctgca
tacttcctctcaaaacatgaaggcttcgttggaagcatcaaaacattcattgaggacttt
gttgtcaccgagatcgacattaatggacagaaggtcaaaacagcacaagccgtgcagacg
gctggctgcacctcctcagaggaaaaccagacaaacacagagttaaaggagaatctttac
tgttctggctcgcaagatgctgacctttcatcagactgggggcagggttcagacacccca
cttcctgctttgggaagttttgatttagatgttattttaggcccgtctgtgagtgaagat
ctggagcagtttgtgatgaccctaagagaaaaacggccgtccggtcctgagctctctctg
ggctccttctccgacaaacaccagagagccaacgtccaccgcgccgtccggcaccgcttc
cccttcctcttgaccgtcaccatccagcccgagatcagggtgagggaagaccccgactac
agggagctggcccgactggtcagagaagaggaagcagaggacttcttcaggttcatcgat
gcgaaggtgcgagggtcgtcctacacttttgggccggatgacagcaaggagcacaggact
gcagtgcaccactttctgaacagaaggttcgggaaactggtggagacaaaaagcttcagc
agccaagggaggacgtcgatctcagtgagactgagagagcacggcaagccgaagaagagg
acagcggaagaacgcaaggaagaagacatttatactgctttcaccctgtgtaaggagaac
ctggagacactggaagccatcagctacatggcagctactctcggggtcctgccgtcagat
ttcacctacgccggcatcaaagacaaaagagccgtcacctaccagtccatggtggtcaag
aaggtctcgccacaacggttgaaagagaaagtagcagaatttgagaagagagggatgcgt
ctctctcagatccgctcggtcaacgagcccctgaagctgggacggctgcgggggaatcac
tttgacctggtggtccgcaaactcagaccacacggagcctccgacgaacacctctctggt
gccgacggggacactcgcctggcggcgctcgtaaaggaagccgtggagaacgtaaagagg
agaggttttgtcaactactacgggccacagcggtttggaagcggacaaagcgtcttgtca
gatcgagtaggattggcgctgctgaaagaggatatggtcagtgctgttcgtctgttcttc
tctccagaggacagtgatgatcctcacagcctcgcgaagagacacttccttcaatcagat
aaccctaaggaatctttagcactcatgccgctgtccaagcccagggagaggctgatgctc
cgcgccctgaatcgctacggtaccggcccaaatggttgtgtccaggcgtggctcagcctg
ccgcacagcataagggttttctatcctcacgcctactgcagcagggtgtggaacgacgcg
gcggcacacaggctctccgctttgggtctcggtgtcagacaaggagacctggtgtggacg
caaacaggacaaaacagaaccgaggacactggagcggtcatttctccccaaatccatgtg
gtgacgcgtgaagaggagcaagcaggagtttacacattaggacaagtgttattgccgatg
ccagggaactctgtaaaatatccagaaaacgcaatgagagcctggtaccaggagagactg
gcaggggacgggctggctgagagccgcttcagagtcagcagcctcaaactgaacctgccg
ggctgctaccgccccctgctggccatcccacacaacctcagctaccagctgcacagagca
gcctgcagccatggcgcgaagaagcaggaatcggacccggggtctctcacactcagcttg
aactttgacctagactcctcctgttacgccaccatctgcctccgagagatcatgaagtgt
gagacttga
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