Gambusia affinis (western mosquitofish): 122826764
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Entry
122826764 CDS
T07758
Symbol
pcna
Name
(RefSeq) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03030
DNA replication
gaf03410
Base excision repair
gaf03420
Nucleotide excision repair
gaf03430
Mismatch repair
gaf04110
Cell cycle
gaf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122826764 (pcna)
03410 Base excision repair
122826764 (pcna)
03420 Nucleotide excision repair
122826764 (pcna)
03430 Mismatch repair
122826764 (pcna)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122826764 (pcna)
09144 Cellular community - eukaryotes
04530 Tight junction
122826764 (pcna)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gaf03032
]
122826764 (pcna)
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122826764 (pcna)
DNA replication proteins [BR:
gaf03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
122826764 (pcna)
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
122826764 (pcna)
MMR (mismatch excision repair)
Other MMR factors
122826764 (pcna)
TLS (translesion DNA synthesis) factors
Other TLS factors
122826764 (pcna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad1
Rad9
Hus1
Herpes_UL42
Motif
Other DBs
NCBI-GeneID:
122826764
NCBI-ProteinID:
XP_043964958
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All DBs
Position
LG03:complement(16969388..16973191)
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AA seq
260 aa
AA seq
DB search
MFEARLVQGSILKKVLEALKDLITEACWDVSSSGISLQSMDSSHVSLVQLTLRHDGFDSY
RCDRNLAMGVNLSSMSKILKCAGNEDIITLRAEDNADTLALVFETLNQEKVSDYEMKLMD
LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSQIGDAVMISCAKDGVKFSASGELGTGNI
KLSQTSNVDKEDEAVTIEMNEPVQLIFALNYLNFFTKATPLSKTVTLSMSADIPLVVEYK
IADMGHIKYYLAPKIDEEAS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaggctcgcttggtccagggctccatcctgaagaaggttctggaggcgctgaaa
gatttgataacagaggcctgctgggatgtcagctcgtccggcatctccctccagagcatg
gactcgtctcacgtctccctggtgcagctcaccctgcggcatgatggcttcgactcttac
cgctgcgacagaaacttggcgatgggggtcaacctcagcagcatgtcaaagatcctgaag
tgtgcaggaaacgaagacatcatcaccctcagagcagaagacaacgccgacacactggct
cttgtgttcgaaaccctcaatcaggagaaagtctcagattatgagatgaagctgatggac
ttggatgttgagcagcttggtattccagagcaggagtacagctgcgtggtgaagatgccc
tctggagagtttgcccgtatctgccgcgacctgtcccagatcggcgacgccgtcatgatc
tcctgcgccaaggacggcgtgaagttctccgcctccggagagctgggtaccggaaacatc
aagctgtcccagaccagcaacgtggacaaagaggacgaggctgtcacaattgagatgaat
gagccggtccagctgatctttgccctgaattacctgaacttcttcacaaaggccacaccg
ctgtccaaaaccgtcaccctcagtatgtctgctgacattcccctcgtggtcgagtataag
atcgctgatatgggacacatcaagtactacctggccccgaagatcgacgaagaggcttcc
taa
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